RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 GRM8O00222 908 aa18.09■□□□□ 0.49
COMMD4-216ENST00000567023 USP17L8P0C7I0 530 aa18.09■□□□□ 0.49
COMMD4-216ENST00000567023 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
COMMD4-216ENST00000567023 POLR2AP24928 1970 aaKnown RBP18.09■□□□□ 0.49
COMMD4-216ENST00000567023 ALDH1L1O75891 902 aa18.08■□□□□ 0.48
COMMD4-216ENST00000567023 CHRNDQ07001 517 aa18.08■□□□□ 0.48
COMMD4-216ENST00000567023 DACT2Q5SW24 774 aa18.08■□□□□ 0.48
COMMD4-216ENST00000567023 STRIP1Q5VSL9 837 aa18.08■□□□□ 0.48
COMMD4-216ENST00000567023 PAXIP1Q6ZW49 1069 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-216ENST00000567023 TXNRD3Q86VQ6 643 aa18.08■□□□□ 0.48
COMMD4-216ENST00000567023 ZNF408Q9H9D4 720 aa18.08■□□□□ 0.48
COMMD4-216ENST00000567023 MYOZ2Q9NPC6 264 aa18.08■□□□□ 0.48
COMMD4-216ENST00000567023 MYO3BQ8WXR4 1341 aa18.07■□□□□ 0.48
COMMD4-216ENST00000567023 MMP14P50281 582 aa18.07■□□□□ 0.48
COMMD4-216ENST00000567023 DLK2Q6UY11 383 aa18.07■□□□□ 0.48
COMMD4-216ENST00000567023 GGA3Q9NZ52 723 aa18.07■□□□□ 0.48
COMMD4-216ENST00000567023 ADM5C9JUS6 153 aa18.06■□□□□ 0.48
COMMD4-216ENST00000567023 E9PSI1 815 aa18.06■□□□□ 0.48
COMMD4-216ENST00000567023 SCARF1Q14162 830 aa18.06■□□□□ 0.48
COMMD4-216ENST00000567023 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
COMMD4-216ENST00000567023 LMBR1LQ6UX01 489 aa18.06■□□□□ 0.48
COMMD4-216ENST00000567023 C15orf52Q6ZUT6 534 aaKnown RBP18.06■□□□□ 0.48
COMMD4-216ENST00000567023 SULF1Q8IWU6 871 aa18.06■□□□□ 0.48
COMMD4-216ENST00000567023 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
COMMD4-216ENST00000567023 ASTN2O75129 1339 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-216ENST00000567023 PITPNM2Q9BZ72 1349 aa18.05■□□□□ 0.48
COMMD4-216ENST00000567023 IRS2Q9Y4H2 1338 aa18.05■□□□□ 0.48
COMMD4-216ENST00000567023 HSPA8P11142 646 aaKnown RBP18.05■□□□□ 0.48
COMMD4-216ENST00000567023 LBX1P52954 281 aa18.05■□□□□ 0.48
COMMD4-216ENST00000567023 C9orf78Q9NZ63 289 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-216ENST00000567023 UTYO14607 1347 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 AOC2O75106 756 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 KLRK1P26718 216 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 HUNKP57058 714 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 SLFN5Q08AF3 891 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 GRM1Q13255 1194 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 CCDC57Q2TAC2 916 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 ANGEL2Q5VTE6 544 aaKnown RBP18.04■□□□□ 0.48
COMMD4-216ENST00000567023 TTLL5Q6EMB2 1281 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 SLC4A10Q6U841 1118 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 OGFOD1Q8N543 542 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 MRPL50Q8N5N7 158 aaKnown RBP18.04■□□□□ 0.48
COMMD4-216ENST00000567023 C2orf69Q8N8R5 385 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 BEGAINQ9BUH8 593 aa18.04■□□□□ 0.48
COMMD4-216ENST00000567023 GBA2Q9HCG7 927 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-216ENST00000567023 ZNF646O15015 1829 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-216ENST00000567023 KCNJ4P48050 445 aa18.03■□□□□ 0.48
COMMD4-216ENST00000567023 BRPF1P55201 1214 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-216ENST00000567023 CD209Q9NNX6 404 aa18.03■□□□□ 0.48
COMMD4-216ENST00000567023 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
COMMD4-216ENST00000567023 PTPRCP08575 1304 aa18.02■□□□□ 0.48
COMMD4-216ENST00000567023 TAF5LO75529 589 aa18.02■□□□□ 0.48
COMMD4-216ENST00000567023 NOGQ13253 232 aa18.02■□□□□ 0.48
COMMD4-216ENST00000567023 LDHAL6AQ6ZMR3 332 aa18.02■□□□□ 0.48
COMMD4-216ENST00000567023 KAZALD1Q96I82 304 aa18.02■□□□□ 0.48
COMMD4-216ENST00000567023 MXD3Q9BW11 206 aa18.02■□□□□ 0.48
COMMD4-216ENST00000567023 SNAP23O00161 211 aa18.01■□□□□ 0.47
COMMD4-216ENST00000567023 WNT10BO00744 389 aa18.01■□□□□ 0.47
COMMD4-216ENST00000567023 CA12O43570 354 aa18.01■□□□□ 0.47
COMMD4-216ENST00000567023 NBPF7P0C2Y1 421 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-216ENST00000567023 RGMBQ6NW40 437 aa18.01■□□□□ 0.47
COMMD4-216ENST00000567023 CDCA5Q96FF9 252 aa18.01■□□□□ 0.47
COMMD4-216ENST00000567023 FAM155AB1AL88 458 aaPredicted RBP18■□□□□ 0.47
COMMD4-216ENST00000567023 IL1R1P14778 569 aa18■□□□□ 0.47
COMMD4-216ENST00000567023 FKBP1BP68106 108 aa18■□□□□ 0.47
COMMD4-216ENST00000567023 GTF2IP78347 998 aa18■□□□□ 0.47
COMMD4-216ENST00000567023 NBPF9Q3BBW0 867 aa18■□□□□ 0.47
COMMD4-216ENST00000567023 TRMT2AQ8IZ69 625 aaKnown RBP18■□□□□ 0.47
COMMD4-216ENST00000567023 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
COMMD4-216ENST00000567023 SSH1Q8WYL5 1049 aa18■□□□□ 0.47
COMMD4-216ENST00000567023 CCDC102AQ96A19 550 aa18■□□□□ 0.47
COMMD4-216ENST00000567023 SUCLG2Q96I99 432 aa18■□□□□ 0.47
COMMD4-216ENST00000567023 ZNF594Q96JF6 807 aaPredicted RBP18■□□□□ 0.47
COMMD4-216ENST00000567023 ALDH1L2Q3SY69 923 aa17.99■□□□□ 0.47
COMMD4-216ENST00000567023 RABL6Q3YEC7 729 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-216ENST00000567023 TAF7LQ5H9L4 462 aa17.99■□□□□ 0.47
COMMD4-216ENST00000567023 FBXW7Q969H0 707 aa17.99■□□□□ 0.47
COMMD4-216ENST00000567023 A0A1B0GUL6 1792 aa17.99■□□□□ 0.47
COMMD4-216ENST00000567023 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
COMMD4-216ENST00000567023 FKBP1AP62942 108 aaKnown RBP17.98■□□□□ 0.47
COMMD4-216ENST00000567023 ZNF804AQ7Z570 1209 aa17.98■□□□□ 0.47
COMMD4-216ENST00000567023 CNNM1Q9NRU3 951 aa17.98■□□□□ 0.47
COMMD4-216ENST00000567023 HDAC9Q9UKV0 1011 aa17.98■□□□□ 0.47
COMMD4-216ENST00000567023 ZNF157P51786 506 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-216ENST00000567023 KIAA0825Q8IV33 1275 aa17.97■□□□□ 0.47
COMMD4-216ENST00000567023 CDCA7LQ96GN5 454 aa17.97■□□□□ 0.47
COMMD4-216ENST00000567023 ZBED3Q96IU2 234 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-216ENST00000567023 ZIC5Q96T25 663 aa17.97■□□□□ 0.47
COMMD4-216ENST00000567023 RIPOR2Q9Y4F9 1068 aa17.97■□□□□ 0.47
COMMD4-216ENST00000567023 CT47B1P0C2W7 299 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-216ENST00000567023 UBE4AQ14139 1066 aa17.96■□□□□ 0.47
COMMD4-216ENST00000567023 CERS5Q8N5B7 392 aa17.96■□□□□ 0.47
COMMD4-216ENST00000567023 MTMR14Q8NCE2 650 aa17.96■□□□□ 0.47
COMMD4-216ENST00000567023 BICC1Q9H694 974 aaKnown RBP17.96■□□□□ 0.47
COMMD4-216ENST00000567023 CAPN15O75808 1086 aa17.95■□□□□ 0.46
COMMD4-216ENST00000567023 SASH1O94885 1247 aa17.95■□□□□ 0.46
COMMD4-216ENST00000567023 SLC10A3P09131 477 aa17.95■□□□□ 0.46
COMMD4-216ENST00000567023 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
COMMD4-216ENST00000567023 PAPPA2Q9BXP8 1791 aa17.94■□□□□ 0.46
COMMD4-216ENST00000567023 PLIN1O60240 522 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms