RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 VPS33BQ9H267 617 aa9.1□□□□□ -0.95
SIN3A-207ENST00000566640 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
SIN3A-207ENST00000566640 CCDC88AQ3V6T2 1871 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 LTBP1Q14766 1721 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 TCIRG1Q13488 830 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 AOC3Q16853 763 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
SIN3A-207ENST00000566640 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 NIM1KQ8IY84 436 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 XAGE3Q8WTP9 111 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 CDHR5Q9HBB8 845 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 PRDM10Q9NQV6 1147 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
SIN3A-207ENST00000566640 DDX21Q9NR30 783 aaKnown RBP eCLIP9.09□□□□□ -0.95
SIN3A-207ENST00000566640 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
SIN3A-207ENST00000566640 GJA3Q9Y6H8 435 aa9.09□□□□□ -0.95
SIN3A-207ENST00000566640 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
SIN3A-207ENST00000566640 PPIP5K2O43314 1243 aa9.08□□□□□ -0.96
SIN3A-207ENST00000566640 BBOX1O75936 387 aa9.08□□□□□ -0.96
SIN3A-207ENST00000566640 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
SIN3A-207ENST00000566640 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.964e-6■■■■□ 21.6
SIN3A-207ENST00000566640 CXCL9Q07325 125 aa9.08□□□□□ -0.96
SIN3A-207ENST00000566640 USP50Q70EL3 339 aaPredicted RBP9.08□□□□□ -0.96
SIN3A-207ENST00000566640 SP8Q8IXZ3 490 aa9.08□□□□□ -0.96
SIN3A-207ENST00000566640 FAM9BQ8IZU0 186 aa9.08□□□□□ -0.96
SIN3A-207ENST00000566640 GPRC5DQ9NZD1 345 aa9.08□□□□□ -0.96
SIN3A-207ENST00000566640 SH3TC1Q8TE82 1336 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 HOXB7P09629 217 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 HCLS1P14317 486 aaPredicted RBP9.07□□□□□ -0.96
SIN3A-207ENST00000566640 KIAA2012Q0VF49 1180 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 AIMP1Q12904 312 aaKnown RBP9.07□□□□□ -0.96
SIN3A-207ENST00000566640 PTGDRQ13258 359 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 GRAPQ13588 217 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 DEFB115Q30KQ5 88 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 CST9Q5W186 159 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 SUPT20HQ8NEM7 779 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 GRAPLQ8TC17 118 aaPredicted RBP9.07□□□□□ -0.96
SIN3A-207ENST00000566640 SLC24A3Q9HC58 644 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 ADARB2Q9NS39 739 aaKnown RBP9.07□□□□□ -0.96
SIN3A-207ENST00000566640 ZNRF3Q9ULT6 936 aa9.07□□□□□ -0.96
SIN3A-207ENST00000566640 CDHR2Q9BYE9 1310 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 WDR33Q9C0J8 1336 aaKnown RBP9.06□□□□□ -0.96
SIN3A-207ENST00000566640 TRAF5O00463 557 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 FECHP22830 423 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 CTCFP49711 727 aaPredicted RBP9.06□□□□□ -0.96
SIN3A-207ENST00000566640 C6orf132Q5T0Z8 1188 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 DPP8Q6V1X1 898 aaPredicted RBP9.06□□□□□ -0.96
SIN3A-207ENST00000566640 MPNDQ8N594 471 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 PLBD2Q8NHP8 589 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 ZNF428Q96B54 188 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 ISCA1Q9BUE6 129 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 MBIPQ9NS73 344 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 CHPF2Q9P2E5 772 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 PGAP2Q9UHJ9 254 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
SIN3A-207ENST00000566640 DUOX1Q9NRD9 1551 aa9.06□□□□□ -0.96
SIN3A-207ENST00000566640 YDJCA8MPS7 323 aa9.05□□□□□ -0.96
SIN3A-207ENST00000566640 HSPA8P11142 646 aaKnown RBP9.05□□□□□ -0.96
SIN3A-207ENST00000566640 PTPREP23469 700 aa9.05□□□□□ -0.96
SIN3A-207ENST00000566640 GMPSP49915 693 aaPredicted RBP9.05□□□□□ -0.96
SIN3A-207ENST00000566640 SF3B3Q15393 1217 aaKnown RBP9.05□□□□□ -0.96
SIN3A-207ENST00000566640 HDGFL1Q5TGJ6 251 aa9.05□□□□□ -0.96
SIN3A-207ENST00000566640 DDX46Q7L014 1031 aaKnown RBP9.05□□□□□ -0.96
SIN3A-207ENST00000566640 TMC4Q7Z404 712 aa9.05□□□□□ -0.96
SIN3A-207ENST00000566640 TSR2Q969E8 191 aaKnown RBP9.05□□□□□ -0.96
SIN3A-207ENST00000566640 AIDAQ96BJ3 306 aa9.05□□□□□ -0.96
SIN3A-207ENST00000566640 TMX4Q9H1E5 349 aaPredicted RBP9.05□□□□□ -0.96
SIN3A-207ENST00000566640 ABT1Q9ULW3 272 aaKnown RBP9.05□□□□□ -0.96
SIN3A-207ENST00000566640 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
SIN3A-207ENST00000566640 THSD7BQ9C0I4 1608 aa9.05□□□□□ -0.96
SIN3A-207ENST00000566640 ELL2O00472 640 aaPredicted RBP9.04□□□□□ -0.96
SIN3A-207ENST00000566640 RAD17O75943 681 aa9.04□□□□□ -0.96
SIN3A-207ENST00000566640 ZNF853P0CG23 659 aa9.04□□□□□ -0.96
SIN3A-207ENST00000566640 LBX1P52954 281 aa9.04□□□□□ -0.96
SIN3A-207ENST00000566640 HIRAP54198 1017 aaPredicted RBP9.04□□□□□ -0.96
SIN3A-207ENST00000566640 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
SIN3A-207ENST00000566640 MAP2K1Q02750 393 aaPredicted RBP9.04□□□□□ -0.96
SIN3A-207ENST00000566640 TRIM28Q13263 835 aaKnown RBP9.04□□□□□ -0.96
SIN3A-207ENST00000566640 CIAPIN1Q6FI81 312 aa9.04□□□□□ -0.96
SIN3A-207ENST00000566640 CAPNS2Q96L46 248 aa9.04□□□□□ -0.96
SIN3A-207ENST00000566640 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
SIN3A-207ENST00000566640 DBF4Q9UBU7 674 aaPredicted RBP9.04□□□□□ -0.96
SIN3A-207ENST00000566640 LAMB2P55268 1798 aa9.04□□□□□ -0.96
SIN3A-207ENST00000566640 GNAI1P63096 354 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 CALD1Q05682 793 aaKnown RBP9.03□□□□□ -0.96
SIN3A-207ENST00000566640 DUSP27Q5VZP5 1158 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 CYP4F22Q6NT55 531 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 SAPCD2Q86UD0 394 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 TRPM4Q8TD43 1214 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 CELF1Q92879 486 aaKnown RBP9.03□□□□□ -0.96
SIN3A-207ENST00000566640 FAM89AQ96GI7 184 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 IFT57Q9NWB7 429 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 HCSTQ9UBK5 93 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 COL4A1P02462 1669 aa9.03□□□□□ -0.96
SIN3A-207ENST00000566640 SHTN1A0MZ66 631 aa9.02□□□□□ -0.97
SIN3A-207ENST00000566640 ATP5J2-PTCD1G3V325 749 aa9.02□□□□□ -0.97
SIN3A-207ENST00000566640 ECE1P42892 770 aa9.02□□□□□ -0.97
SIN3A-207ENST00000566640 HIC1Q14526 733 aa9.02□□□□□ -0.97
SIN3A-207ENST00000566640 TNIP1Q15025 636 aa9.02□□□□□ -0.97
SIN3A-207ENST00000566640 DPF2Q92785 391 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms