RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC01541-201ENST00000566582 RIC1Q4ADV7 1423 aa10.4□□□□□ -0.75
LINC01541-201ENST00000566582 SLIT2O94813 1529 aa10.4□□□□□ -0.75
LINC01541-201ENST00000566582 M0R2C6 588 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 HMGB1P09429 215 aaKnown RBP10.39□□□□□ -0.75
LINC01541-201ENST00000566582 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 OSBP2Q969R2 916 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
LINC01541-201ENST00000566582 MYH3P11055 1940 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 MCAMP43121 646 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 ST3GAL1Q11201 340 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 USP48Q86UV5 1035 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 AK7Q96M32 723 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 NAP1L2Q9ULW6 460 aaPredicted RBP10.39□□□□□ -0.75
LINC01541-201ENST00000566582 CNPY2Q9Y2B0 182 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
LINC01541-201ENST00000566582 SPEF2Q9C093 1822 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 CAMTA2O94983 1202 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 PDCP20941 246 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 PLCB2Q00722 1185 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 PUM3Q15397 648 aaKnown RBP10.38□□□□□ -0.75
LINC01541-201ENST00000566582 ANP32BQ92688 251 aaKnown RBP10.38□□□□□ -0.75
LINC01541-201ENST00000566582 BRF1Q92994 677 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
LINC01541-201ENST00000566582 MROH5Q6ZUA9 1318 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 NWD2Q9ULI1 1742 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 IDH1O75874 414 aaKnown RBP10.38□□□□□ -0.75
LINC01541-201ENST00000566582 KCNQ4P56696 695 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 TTF1Q15361 905 aaPredicted RBP10.38□□□□□ -0.75
LINC01541-201ENST00000566582 CCDC152Q4G0S7 254 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 DHX32Q7L7V1 743 aaKnown RBP10.38□□□□□ -0.75
LINC01541-201ENST00000566582 LPIN2Q92539 896 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 APPBP2Q92624 585 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 SYAP1Q96A49 352 aaPredicted RBP10.38□□□□□ -0.75
LINC01541-201ENST00000566582 TMEM63CQ9P1W3 806 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 CTNNA3Q9UI47 895 aa10.38□□□□□ -0.75
LINC01541-201ENST00000566582 E7EWF7 191 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 FIBPO43427 364 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 IGHMBP2P38935 993 aaKnown RBP10.37□□□□□ -0.75
LINC01541-201ENST00000566582 ZNF445P59923 1031 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 IMMTQ16891 758 aaKnown RBP10.37□□□□□ -0.75
LINC01541-201ENST00000566582 SLC9C2Q5TAH2 1124 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 CCDC102BQ68D86 513 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 TTLL5Q6EMB2 1281 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 ZSCAN25Q6NSZ9 544 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 STOX1Q6ZVD7 989 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 VGLL2Q8N8G2 317 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 SEC31BQ9NQW1 1179 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 MTMR6Q9Y217 621 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 ABCC12Q96J65 1359 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 SYCE3A1L190 88 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 GADD45BO75293 160 aaPredicted RBP10.37□□□□□ -0.75
LINC01541-201ENST00000566582 PDIA4P13667 645 aaKnown RBP10.37□□□□□ -0.75
LINC01541-201ENST00000566582 SLC5A1P13866 664 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 PHKA1P46020 1223 aa10.37□□□□□ -0.75
LINC01541-201ENST00000566582 PUS7LQ9H0K6 701 aaKnown RBP10.37□□□□□ -0.75
LINC01541-201ENST00000566582 A0A0G2JLW4 131 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
LINC01541-201ENST00000566582 NASPP49321 788 aaPredicted RBP10.36□□□□□ -0.75
LINC01541-201ENST00000566582 HAND2P61296 217 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 DNM1Q05193 864 aaKnown RBP10.36□□□□□ -0.75
LINC01541-201ENST00000566582 VPS72Q15906 364 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 CSPP1Q1MSJ5 1256 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 CHST3Q7LGC8 479 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 FERMT3Q86UX7 667 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 GPAA1O43292 621 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 APPP05067 770 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 FAM184AQ8NB25 1140 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 GTF3C6Q969F1 213 aa10.36□□□□□ -0.75
LINC01541-201ENST00000566582 SNAP23O00161 211 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 NTSR2O95665 410 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 FGAP02671 866 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 APOBRQ0VD83 1088 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 CDC37L1Q7L3B6 337 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 LINC00116Q8NCU8 138 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 ZNF512BQ96KM6 892 aaPredicted RBP10.35□□□□□ -0.75
LINC01541-201ENST00000566582 USP21Q9UK80 565 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 H3BQV1 296 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 IFFO2Q5TF58 517 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 DDX11Q96FC9 970 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 TCHHQ07283 1943 aa10.35□□□□□ -0.75
LINC01541-201ENST00000566582 MYH14Q7Z406 1995 aaKnown RBP10.35□□□□□ -0.75
LINC01541-201ENST00000566582 ZNF213O14771 459 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 JAK2O60674 1132 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 PHF14O94880 888 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 ARID4AP29374 1257 aaPredicted RBP10.34□□□□□ -0.75
LINC01541-201ENST00000566582 ADD2P35612 726 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 UBE2HP62256 183 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 CCT2P78371 535 aaKnown RBP10.34□□□□□ -0.75
LINC01541-201ENST00000566582 LRSAM1Q6UWE0 723 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 CLEC4GQ6UXB4 293 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 RALYLQ86SE5 291 aaKnown RBP10.34□□□□□ -0.75
LINC01541-201ENST00000566582 SPATA5Q8NB90 893 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 TRIM44Q96DX7 344 aaPredicted RBP10.34□□□□□ -0.75
LINC01541-201ENST00000566582 PIH1D3Q9NQM4 214 aaKnown RBP10.34□□□□□ -0.75
LINC01541-201ENST00000566582 BCL9LQ86UU0 1499 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 FGFR2P21802 821 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms