RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ALG1LQ6GMV1 187 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 HS2ST1Q7LGA3 356 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 SYT9Q86SS6 491 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 CKAP2LQ8IYA6 745 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 ZCRB1Q8TBF4 217 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 FAM129BQ96TA1 746 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 TSPAN10Q9H1Z9 355 aaPredicted RBP4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 NEUROD4Q9HD90 331 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 PRDM6Q9NQX0 595 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 SERTAD1Q9UHV2 236 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 GGT7Q9UJ14 662 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 NOP58Q9Y2X3 529 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 RIPOR2Q9Y4F9 1068 aa4.61□□□□□ -1.67
HERPUD1-211ENST00000566550 M0R082 166 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 TPD52L2O43399 206 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 PPP1R12BO60237 982 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 SIN3BO75182 1162 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 PARNO95453 639 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 CTSHP09668 335 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 FGRP09769 529 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 HSD3B2P26439 372 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 DNM1Q05193 864 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 TRAPPC3LQ5T215 181 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 GORABQ5T7V8 394 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 MCTP1Q6DN14 999 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 BICDL1Q6ZP65 573 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 ZNF417Q8TAU3 575 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 ZNF587Q96SQ5 575 aaPredicted RBP4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 STIM2Q9P246 746 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 G3BP2Q9UN86 482 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 POLIQ9UNA4 740 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 ATAD2Q6PL18 1390 aa4.6□□□□□ -1.67
HERPUD1-211ENST00000566550 LOC102724159A0A0B4J2E5 919 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 PLEKHD1A6NEE1 506 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 ADARB2-AS1A8MUL3 147 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 FAM229AH3BQW9 127 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 TNFRSF10BO14763 440 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 PEX14O75381 377 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 IGHA2P01877 340 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 ATP4AP20648 1035 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 EIF4BP23588 611 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 MZF1P28698 734 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 RAC1P63000 192 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 PAK2Q13177 524 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 ORC1Q13415 861 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 PWP2Q15269 919 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 GRIK4Q16099 956 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 COX20Q5RI15 118 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 SAMD5Q5TGI4 173 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 TXNRD3Q86VQ6 643 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 EXOC8Q8IYI6 725 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 TP53INP1Q96A56 240 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 NGLY1Q96IV0 654 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 MYH16Q9H6N6 1097 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 ETNK1Q9HBU6 452 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 SLC52A1Q9NWF4 448 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 ZDHHC3Q9NYG2 299 aa4.59□□□□□ -1.67
HERPUD1-211ENST00000566550 CCDC85CA6NKD9 419 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 TMEM229AB2RXF0 380 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 ZBTB39O15060 712 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 MAP4K4O95819 1239 aaPredicted RBP4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 SSBP05455 408 aaKnown RBP eCLIP4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 ADGRE1Q14246 886 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 HSP90AB2PQ58FF8 381 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 CCDC181Q5TID7 509 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 ABTB2Q8N961 1025 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 EDEM1Q92611 657 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 ALKBH8Q96BT7 664 aaKnown RBP4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 SRPK1Q96SB4 655 aaKnown RBP4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 IFT57Q9NWB7 429 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 SPG7Q9UQ90 795 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 AK5Q9Y6K8 562 aa4.58□□□□□ -1.68
HERPUD1-211ENST00000566550 OPLAHO14841 1288 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 BACH1O14867 736 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 DNAJC6O75061 913 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 INHAP05111 366 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 XRCC5P13010 732 aaKnown RBP4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 ATF4P18848 351 aaPredicted RBP4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 SMTNP53814 917 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 GDF10P55107 478 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 MBTPS1Q14703 1052 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 MEI1Q5TIA1 1274 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 TMED8Q6PL24 325 aaPredicted RBP4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 MICALL1Q8N3F8 863 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 GPRASP2Q96D09 838 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 CSRNP1Q96S65 589 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 ZIC5Q96T25 663 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 TRIM55Q9BYV6 548 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 SRA1Q9HD15 236 aaKnown RBP4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 PCDH12Q9NPG4 1184 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 CHPF2Q9P2E5 772 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 RNF112Q9ULX5 631 aa4.57□□□□□ -1.68
HERPUD1-211ENST00000566550 COL17A1Q9UMD9 1497 aaPredicted RBP4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 CDK2AP1O14519 115 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 LILRB5O75023 590 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 S100BP04271 92 aaPredicted RBP4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 PLEKHG6Q3KR16 790 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 C8orf34Q49A92 452 aa4.56□□□□□ -1.68
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