RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ZKSCAN3Q9BRR0 538 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-209ENST00000566240 PPM1HQ9ULR3 514 aa7.69□□□□□ -1.18
CNOT1-209ENST00000566240 HOXD8P13378 290 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-209ENST00000566240 ACPPP15309 386 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 MAP3K10Q02779 954 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 PWP1Q13610 501 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 CEP120Q8N960 986 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 ABHD17AQ96GS6 310 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 CNTNAP3BQ96NU0 1288 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 CNTNAP3Q9BZ76 1288 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 ZFYVE1Q9HBF4 777 aa7.68□□□□□ -1.18
CNOT1-209ENST00000566240 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
CNOT1-209ENST00000566240 PPFIA3O75145 1194 aa7.67□□□□□ -1.18
CNOT1-209ENST00000566240 CD33P20138 364 aa7.67□□□□□ -1.18
CNOT1-209ENST00000566240 DHX32Q7L7V1 743 aaKnown RBP7.67□□□□□ -1.18
CNOT1-209ENST00000566240 RAB44Q7Z6P3 723 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-209ENST00000566240 FAM177A1Q8N128 213 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-209ENST00000566240 GPRASP2Q96D09 838 aa7.67□□□□□ -1.18
CNOT1-209ENST00000566240 TRIM56Q9BRZ2 755 aaKnown RBP7.67□□□□□ -1.18
CNOT1-209ENST00000566240 SPON2Q9BUD6 331 aa7.67□□□□□ -1.18
CNOT1-209ENST00000566240 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
CNOT1-209ENST00000566240 DZANK1Q9NVP4 752 aa7.67□□□□□ -1.18
CNOT1-209ENST00000566240 ATXN7L1Q9ULK2 861 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-209ENST00000566240 FBXO24O75426 580 aa7.66□□□□□ -1.18
CNOT1-209ENST00000566240 TRPA1O75762 1119 aa7.66□□□□□ -1.18
CNOT1-209ENST00000566240 RLBP1P12271 317 aa7.66□□□□□ -1.18
CNOT1-209ENST00000566240 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-209ENST00000566240 GBP2P32456 591 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-209ENST00000566240 SV2BQ7L1I2 683 aa7.66□□□□□ -1.18
CNOT1-209ENST00000566240 SPACA7Q96KW9 195 aa7.66□□□□□ -1.18
CNOT1-209ENST00000566240 TMEM74Q96NL1 305 aa7.66□□□□□ -1.18
CNOT1-209ENST00000566240 NSUN5Q96P11 429 aaKnown RBP7.66□□□□□ -1.18
CNOT1-209ENST00000566240 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 F6X3S4 739 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 GRIA4P48058 902 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 NRLP54845 237 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 RBL2Q08999 1139 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 NEUROD1Q13562 356 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 TPTE2Q6XPS3 522 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 MCF2L2Q86YR7 1114 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 KIAA0825Q8IV33 1275 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 RASGRP4Q8TDF6 673 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 GTPBP3Q969Y2 492 aaKnown RBP7.65□□□□□ -1.18
CNOT1-209ENST00000566240 ZNF837Q96EG3 531 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-209ENST00000566240 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.65□□□□□ -1.182e-11■□□□□ 8.7
CNOT1-209ENST00000566240 LNPKQ9C0E8 428 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 ADAMTS1Q9UHI8 967 aa7.65□□□□□ -1.18
CNOT1-209ENST00000566240 LOC102724428A0A0B4J2F2 783 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 NFKBIEO00221 500 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 SMARCA5O60264 1052 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-209ENST00000566240 FGRP09769 529 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 ITGA6P23229 1130 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 EIF4A3P38919 411 aaKnown RBP7.64□□□□□ -1.19
CNOT1-209ENST00000566240 SIK1P57059 783 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 MAP3K11Q16584 847 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 SPRED3Q2MJR0 410 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 FAM182BQ5T319 152 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 TRPM4Q8TD43 1214 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 NXPE3Q969Y0 559 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 CEP44Q9C0F1 390 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 BHLHE41Q9C0J9 482 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-209ENST00000566240 PHF24Q9UPV7 400 aa7.64□□□□□ -1.19
CNOT1-209ENST00000566240 METTL12A8MUP2 240 aa7.63□□□□□ -1.19
CNOT1-209ENST00000566240 ZBTB42B2RXF5 422 aa7.63□□□□□ -1.19
CNOT1-209ENST00000566240 FGFR3P22607 806 aa7.63□□□□□ -1.19
CNOT1-209ENST00000566240 ITPKAP23677 461 aa7.63□□□□□ -1.19
CNOT1-209ENST00000566240 TMEM102Q8N9M5 508 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-209ENST00000566240 SPATA32Q96LK8 384 aa7.63□□□□□ -1.19
CNOT1-209ENST00000566240 HHIPQ96QV1 700 aa7.63□□□□□ -1.19
CNOT1-209ENST00000566240 HIRIP3Q9BW71 556 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-209ENST00000566240 A0A096LPE4 126 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 A0A1W2PPZ6 126 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 J3QW42 95 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 PDE2AO00408 941 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-209ENST00000566240 STK10O94804 968 aaKnown RBP7.62□□□□□ -1.19
CNOT1-209ENST00000566240 GSK3AP49840 483 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 GPLD1P80108 840 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 CTBSQ01459 385 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-209ENST00000566240 SOGA3Q5TF21 947 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 HFE2Q6ZVN8 426 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 ZNF296Q8WUU4 475 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-209ENST00000566240 SEC16BQ96JE7 1060 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 PBX4Q9BYU1 374 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 IGFLR1Q9H665 355 aa7.62□□□□□ -1.19
CNOT1-209ENST00000566240 CELA3AP09093 270 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 LIG3P49916 1009 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 KRT76Q01546 638 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 CCDC144BQ3MJ40 725 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 RPS26P11Q5JNZ5 115 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-209ENST00000566240 FOXR1Q6PIV2 292 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 PHC3Q8NDX5 983 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 PMFBP1Q8TBY8 1022 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-209ENST00000566240 NECAB3Q96P71 396 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-209ENST00000566240 TRERF1Q96PN7 1200 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 RASSF4Q9H2L5 321 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms