RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 LEMD3Q9Y2U8 911 aa22.77■■□□□ 1.24
COMMD4-213ENST00000565834 ATP6V0A2Q9Y487 856 aa22.77■■□□□ 1.24
COMMD4-213ENST00000565834 WTIPA6NIX2 430 aaPredicted RBP22.77■■□□□ 1.24
COMMD4-213ENST00000565834 SEC24BO95487 1268 aa22.77■■□□□ 1.24
COMMD4-213ENST00000565834 ARID4AP29374 1257 aaPredicted RBP22.77■■□□□ 1.24
COMMD4-213ENST00000565834 NDUFB9Q9Y6M9 179 aa22.77■■□□□ 1.24
COMMD4-213ENST00000565834 CHMLP26374 656 aa22.76■■□□□ 1.23
COMMD4-213ENST00000565834 GPSM2P81274 684 aa22.76■■□□□ 1.23
COMMD4-213ENST00000565834 CNKSR1Q969H4 720 aa22.76■■□□□ 1.23
COMMD4-213ENST00000565834 EDC3Q96F86 508 aaKnown RBP22.76■■□□□ 1.23
COMMD4-213ENST00000565834 PAG1Q9NWQ8 432 aa22.76■■□□□ 1.23
COMMD4-213ENST00000565834 SLX4Q8IY92 1834 aa22.76■■□□□ 1.23
COMMD4-213ENST00000565834 LTBP1Q14766 1721 aa22.75■■□□□ 1.23
COMMD4-213ENST00000565834 BCAMP50895 628 aa22.75■■□□□ 1.23
COMMD4-213ENST00000565834 CAVIN4Q5BKX8 364 aa22.75■■□□□ 1.23
COMMD4-213ENST00000565834 FSD1Q9BTV5 496 aa22.75■■□□□ 1.23
COMMD4-213ENST00000565834 NSFL1CQ9UNZ2 370 aaKnown RBP22.75■■□□□ 1.23
COMMD4-213ENST00000565834 GOLIM4O00461 696 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 EIF5BO60841 1220 aaKnown RBP22.74■■□□□ 1.23
COMMD4-213ENST00000565834 MCAMP43121 646 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 SCARF1Q14162 830 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 TMX4Q9H1E5 349 aaPredicted RBP22.74■■□□□ 1.23
COMMD4-213ENST00000565834 SNRKQ9NRH2 765 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 PODXL2Q9NZ53 605 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 ATP2B4P23634 1241 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 GYG1P46976 350 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 FKBP4Q02790 459 aaKnown RBP eCLIP22.74■■□□□ 1.23
COMMD4-213ENST00000565834 GNL3LQ9NVN8 582 aaKnown RBP22.74■■□□□ 1.23
COMMD4-213ENST00000565834 GGA1Q9UJY5 639 aa22.74■■□□□ 1.23
COMMD4-213ENST00000565834 MYH13Q9UKX3 1938 aa22.73■■□□□ 1.23
COMMD4-213ENST00000565834 UFL1O94874 794 aa22.73■■□□□ 1.23
COMMD4-213ENST00000565834 MFAP1P55081 439 aaKnown RBP22.73■■□□□ 1.23
COMMD4-213ENST00000565834 PRPF40BQ6NWY9 871 aaKnown RBP22.73■■□□□ 1.23
COMMD4-213ENST00000565834 VPS37DQ86XT2 251 aa22.73■■□□□ 1.23
COMMD4-213ENST00000565834 UPF2Q9HAU5 1272 aaKnown RBP22.73■■□□□ 1.23
COMMD4-213ENST00000565834 HIP1O00291 1037 aa22.72■■□□□ 1.23
COMMD4-213ENST00000565834 KLRK1P26718 216 aa22.72■■□□□ 1.23
COMMD4-213ENST00000565834 FAM84BQ96KN1 310 aaPredicted RBP22.72■■□□□ 1.23
COMMD4-213ENST00000565834 SGIP1Q9BQI5 828 aa22.72■■□□□ 1.23
COMMD4-213ENST00000565834 DIAPH3Q9NSV4 1193 aa22.72■■□□□ 1.23
COMMD4-213ENST00000565834 RFX7Q2KHR2 1363 aa22.72■■□□□ 1.23
COMMD4-213ENST00000565834 ZAP70P43403 619 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 PI16Q6UXB8 463 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 KBTBD3Q8NAB2 608 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 MYH7P12883 1935 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 IRS2Q9Y4H2 1338 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 RASGRF1Q13972 1273 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 FBXO33Q7Z6M2 555 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 SPATA5Q8NB90 893 aa22.71■■□□□ 1.23
COMMD4-213ENST00000565834 KIAA1551Q9HCM1 1747 aa22.7■■□□□ 1.22
COMMD4-213ENST00000565834 HIBADHP31937 336 aaKnown RBP22.7■■□□□ 1.22
COMMD4-213ENST00000565834 C15orf52Q6ZUT6 534 aaKnown RBP22.7■■□□□ 1.22
COMMD4-213ENST00000565834 ESYT1Q9BSJ8 1104 aa22.7■■□□□ 1.22
COMMD4-213ENST00000565834 HMG20BQ9P0W2 317 aa22.7■■□□□ 1.22
COMMD4-213ENST00000565834 DPEP1P16444 411 aa22.69■■□□□ 1.22
COMMD4-213ENST00000565834 MPNDQ8N594 471 aa22.69■■□□□ 1.22
COMMD4-213ENST00000565834 TBC1D16Q8TBP0 767 aa22.69■■□□□ 1.22
COMMD4-213ENST00000565834 ANTXR1Q9H6X2 564 aa22.69■■□□□ 1.22
COMMD4-213ENST00000565834 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
COMMD4-213ENST00000565834 A0A0G2JLW4 131 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 PTGER2P43116 358 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 TGFB2P61812 414 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
COMMD4-213ENST00000565834 OLFM4Q6UX06 510 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 TXNRD3Q86VQ6 643 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 TICAM2Q86XR7 235 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 RUFY2Q8WXA3 655 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 POLLQ9UGP5 575 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 MYO5AQ9Y4I1 1855 aaKnown RBP22.68■■□□□ 1.22
COMMD4-213ENST00000565834 DUOX1Q9NRD9 1551 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 C6orf229H3BNL8 230 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 CWC27Q6UX04 472 aaKnown RBP22.68■■□□□ 1.22
COMMD4-213ENST00000565834 DPP8Q6V1X1 898 aaPredicted RBP22.68■■□□□ 1.22
COMMD4-213ENST00000565834 TTLL6Q8N841 843 aa22.68■■□□□ 1.22
COMMD4-213ENST00000565834 IQSEC3Q9UPP2 1182 aaPredicted RBP22.68■■□□□ 1.22
COMMD4-213ENST00000565834 DOCK2Q92608 1830 aa22.67■■□□□ 1.22
COMMD4-213ENST00000565834 SEMA3EO15041 775 aa22.67■■□□□ 1.22
COMMD4-213ENST00000565834 REC8O95072 547 aa22.67■■□□□ 1.22
COMMD4-213ENST00000565834 CYP2E1P05181 493 aaPredicted RBP22.67■■□□□ 1.22
COMMD4-213ENST00000565834 ZNF804AQ7Z570 1209 aa22.67■■□□□ 1.22
COMMD4-213ENST00000565834 GPR101Q96P66 508 aaPredicted RBP22.67■■□□□ 1.22
COMMD4-213ENST00000565834 MED23Q9ULK4 1368 aa22.66■■□□□ 1.22
COMMD4-213ENST00000565834 LRRFIP1Q32MZ4 808 aaKnown RBP22.66■■□□□ 1.22
COMMD4-213ENST00000565834 PPP1R1BQ9UD71 204 aaPredicted RBP22.66■■□□□ 1.22
COMMD4-213ENST00000565834 DENND2AQ9ULE3 1009 aa22.66■■□□□ 1.22
COMMD4-213ENST00000565834 FRAT2O75474 233 aaPredicted RBP22.65■■□□□ 1.22
COMMD4-213ENST00000565834 KCNA3P22001 575 aa22.65■■□□□ 1.22
COMMD4-213ENST00000565834 NMIQ13287 307 aaPredicted RBP22.65■■□□□ 1.22
COMMD4-213ENST00000565834 ZNF219Q9P2Y4 722 aaPredicted RBP22.65■■□□□ 1.22
COMMD4-213ENST00000565834 COL1A1P02452 1464 aaPredicted RBP22.65■■□□□ 1.22
COMMD4-213ENST00000565834 SGSM2O43147 1006 aa22.65■■□□□ 1.22
COMMD4-213ENST00000565834 CC2D2BQ6DHV5 1058 aa22.65■■□□□ 1.22
COMMD4-213ENST00000565834 C7orf43Q8WVR3 580 aa22.65■■□□□ 1.22
COMMD4-213ENST00000565834 SPON1Q9HCB6 807 aa22.65■■□□□ 1.22
COMMD4-213ENST00000565834 CD2APQ9Y5K6 639 aa22.65■■□□□ 1.22
COMMD4-213ENST00000565834 BRCA1P38398 1863 aaKnown RBP22.64■■□□□ 1.21
COMMD4-213ENST00000565834 ZBTB22O15209 634 aa22.64■■□□□ 1.21
COMMD4-213ENST00000565834 KLHL34Q8N239 644 aa22.64■■□□□ 1.21
COMMD4-213ENST00000565834 FAM227BQ96M60 508 aa22.64■■□□□ 1.21
COMMD4-213ENST00000565834 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms