RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TAOK3Q9H2K8 898 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 POLLQ9UGP5 575 aa9.53□□□□□ -0.88
CDH1-208ENST00000565810 GOLGB1Q14789 3259 aaKnown RBP9.52□□□□□ -0.89
CDH1-208ENST00000565810 RIMBP2O15034 1052 aa9.52□□□□□ -0.89
CDH1-208ENST00000565810 FRAT2O75474 233 aaPredicted RBP9.52□□□□□ -0.89
CDH1-208ENST00000565810 UQCRFS1P1P0C7P4 283 aa9.52□□□□□ -0.89
CDH1-208ENST00000565810 MX1P20591 662 aa9.52□□□□□ -0.89
CDH1-208ENST00000565810 ADORA1P30542 326 aa9.52□□□□□ -0.89
CDH1-208ENST00000565810 HIBADHP31937 336 aaKnown RBP9.52□□□□□ -0.89
CDH1-208ENST00000565810 ARHGAP27Q6ZUM4 889 aa9.52□□□□□ -0.89
CDH1-208ENST00000565810 C15orf52Q6ZUT6 534 aaKnown RBP9.52□□□□□ -0.89
CDH1-208ENST00000565810 ECHDC1Q9NTX5 307 aa9.52□□□□□ -0.89
CDH1-208ENST00000565810 DBNLQ9UJU6 430 aaKnown RBP9.52□□□□□ -0.89
CDH1-208ENST00000565810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.52□□□□□ -0.89
CDH1-208ENST00000565810 TTC41PQ6P2S7 1318 aa9.52□□□□□ -0.89
CDH1-208ENST00000565810 PPIP5K2O43314 1243 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 GRIN3BO60391 1043 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 GLRX3O76003 335 aaKnown RBP9.51□□□□□ -0.89
CDH1-208ENST00000565810 GYG1P46976 350 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 RGS3P49796 1198 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 BCAMP50895 628 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 CCDC102BQ68D86 513 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 FBXO33Q7Z6M2 555 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 SLC51AQ86UW1 340 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 FAM84BQ96KN1 310 aaPredicted RBP9.51□□□□□ -0.89
CDH1-208ENST00000565810 COA1Q9GZY4 146 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
CDH1-208ENST00000565810 ANKRD31Q8N7Z5 1873 aa9.51□□□□□ -0.89
CDH1-208ENST00000565810 MED23Q9ULK4 1368 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 MYH3P11055 1940 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 ZNF609O15014 1411 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 LRP5O75197 1615 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 WTIPA6NIX2 430 aaPredicted RBP9.5□□□□□ -0.89
CDH1-208ENST00000565810 ATP5JP18859 108 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 PDE4AP27815 886 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 IARSP41252 1262 aaKnown RBP9.5□□□□□ -0.89
CDH1-208ENST00000565810 PDE1AP54750 535 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 KIAA2012Q0VF49 1180 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 PLEKHM2Q8IWE5 1019 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 OTUD7AQ8TE49 926 aaPredicted RBP9.5□□□□□ -0.89
CDH1-208ENST00000565810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDH1-208ENST00000565810 JDP2Q8WYK2 163 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 ZNF512BQ96KM6 892 aaPredicted RBP9.5□□□□□ -0.89
CDH1-208ENST00000565810 GPR101Q96P66 508 aaPredicted RBP9.5□□□□□ -0.89
CDH1-208ENST00000565810 ZNF277Q9NRM2 450 aaPredicted RBP9.5□□□□□ -0.89
CDH1-208ENST00000565810 STAP2Q9UGK3 403 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 DENND2AQ9ULE3 1009 aa9.5□□□□□ -0.89
CDH1-208ENST00000565810 SEMA3EO15041 775 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 KLRK1P26718 216 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 PHKA1P46020 1223 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 AOC3Q16853 763 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 DOK7Q18PE1 504 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 PODNQ7Z5L7 613 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 TXNRD3Q86VQ6 643 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 BOLA2Q9H3K6 86 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 OSBPL3Q9H4L5 887 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 CD209Q9NNX6 404 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 AOX1Q06278 1338 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 LTBP3Q9NS15 1303 aa9.49□□□□□ -0.89
CDH1-208ENST00000565810 KIF13BQ9NQT8 1826 aa9.48□□□□□ -0.89
CDH1-208ENST00000565810 NFKBIEO00221 500 aa9.48□□□□□ -0.89
CDH1-208ENST00000565810 YBX3P16989 372 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDH1-208ENST00000565810 ARID4AP29374 1257 aaPredicted RBP9.48□□□□□ -0.89
CDH1-208ENST00000565810 TSHZ3Q63HK5 1081 aa9.48□□□□□ -0.89
CDH1-208ENST00000565810 NIM1KQ8IY84 436 aa9.48□□□□□ -0.89
CDH1-208ENST00000565810 TDRD7Q8NHU6 1098 aaKnown RBP9.48□□□□□ -0.89
CDH1-208ENST00000565810 DNAJC2Q99543 621 aaKnown RBP9.48□□□□□ -0.89
CDH1-208ENST00000565810 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
CDH1-208ENST00000565810 SALL3Q9BXA9 1300 aa9.48□□□□□ -0.89
CDH1-208ENST00000565810 COL4A1P02462 1669 aa9.48□□□□□ -0.89
CDH1-208ENST00000565810 COL11A2P13942 1736 aaPredicted RBP9.48□□□□□ -0.89
CDH1-208ENST00000565810 UTRNP46939 3433 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 ZBTB22O15209 634 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 ECE2O60344 883 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 IL1R1P14778 569 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 LMNB1P20700 586 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 RASSF7Q02833 373 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 CHAF1AQ13111 956 aaPredicted RBP9.47□□□□□ -0.89
CDH1-208ENST00000565810 TTF1Q15361 905 aaPredicted RBP9.47□□□□□ -0.89
CDH1-208ENST00000565810 SKAP1Q86WV1 359 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 CNTROBQ8N137 903 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 ZGPATQ8N5A5 531 aaKnown RBP9.47□□□□□ -0.89
CDH1-208ENST00000565810 SPATA5Q8NB90 893 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 WDR66Q8TBY9 1149 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 PI4K2BQ8TCG2 481 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 HAUS7Q99871 368 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
CDH1-208ENST00000565810 IRS2Q9Y4H2 1338 aa9.47□□□□□ -0.89
CDH1-208ENST00000565810 MCAMP43121 646 aa9.46□□□□□ -0.9
CDH1-208ENST00000565810 EIF6P56537 245 aaKnown RBP9.46□□□□□ -0.9
CDH1-208ENST00000565810 RASGRF1Q13972 1273 aa9.46□□□□□ -0.9
CDH1-208ENST00000565810 LRRFIP1Q32MZ4 808 aaKnown RBP9.46□□□□□ -0.9
CDH1-208ENST00000565810 TTC22Q5TAA0 569 aa9.46□□□□□ -0.9
CDH1-208ENST00000565810 TTLL5Q6EMB2 1281 aa9.46□□□□□ -0.9
CDH1-208ENST00000565810 TBC1D22AQ8WUA7 517 aa9.46□□□□□ -0.9
CDH1-208ENST00000565810 RILPL2Q969X0 211 aa9.46□□□□□ -0.9
CDH1-208ENST00000565810 EVI5LQ96CN4 794 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms