RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 LDHDQ86WU2 507 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 COL4A5P29400 1685 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 DUOX1Q9NRD9 1551 aa12.49□□□□□ -0.41
CNOT1-208ENST00000565697 CXCL9Q07325 125 aa12.49□□□□□ -0.41
CNOT1-208ENST00000565697 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
CNOT1-208ENST00000565697 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
CNOT1-208ENST00000565697 API5Q9BZZ5 524 aaKnown RBP12.49□□□□□ -0.41
CNOT1-208ENST00000565697 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
CNOT1-208ENST00000565697 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
CNOT1-208ENST00000565697 COL4A1P02462 1669 aa12.48□□□□□ -0.41
CNOT1-208ENST00000565697 UTYO14607 1347 aa12.48□□□□□ -0.41
CNOT1-208ENST00000565697 FOXO4P98177 505 aa12.48□□□□□ -0.41
CNOT1-208ENST00000565697 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
CNOT1-208ENST00000565697 TAF7LQ5H9L4 462 aa12.48□□□□□ -0.41
CNOT1-208ENST00000565697 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
CNOT1-208ENST00000565697 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
CNOT1-208ENST00000565697 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
CNOT1-208ENST00000565697 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 YDJCA8MPS7 323 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 SNPHO15079 494 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 ECE2O60344 883 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 RAD17O75943 681 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 CCT4P50991 539 aaKnown RBP12.47□□□□□ -0.41
CNOT1-208ENST00000565697 SCNN1DP51172 638 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
CNOT1-208ENST00000565697 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 USP50Q70EL3 339 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-208ENST00000565697 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 GPRC5DQ9NZD1 345 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 NOB1Q9ULX3 412 aaKnown RBP12.47□□□□□ -0.41
CNOT1-208ENST00000565697 HDAC5Q9UQL6 1122 aa12.47□□□□□ -0.41
CNOT1-208ENST00000565697 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
CNOT1-208ENST00000565697 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
CNOT1-208ENST00000565697 RPS12P25398 132 aaKnown RBP12.46□□□□□ -0.41
CNOT1-208ENST00000565697 DOK7Q18PE1 504 aa12.46□□□□□ -0.41
CNOT1-208ENST00000565697 PODNQ7Z5L7 613 aa12.46□□□□□ -0.41
CNOT1-208ENST00000565697 ADARB2Q9NS39 739 aaKnown RBP12.46□□□□□ -0.41
CNOT1-208ENST00000565697 MED23Q9ULK4 1368 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 H7C1D1 291 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 PSMD14O00487 310 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 EPS15P42566 896 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 KCNJ4P48050 445 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 GMPSP49915 693 aaPredicted RBP12.45□□□□□ -0.42
CNOT1-208ENST00000565697 DPF2Q92785 391 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 SUCLG2Q96I99 432 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 SPEF2Q9C093 1822 aa12.45□□□□□ -0.42
CNOT1-208ENST00000565697 ZNF804BA4D1E1 1349 aa12.44□□□□□ -0.42
CNOT1-208ENST00000565697 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
CNOT1-208ENST00000565697 CHRNDQ07001 517 aa12.44□□□□□ -0.42
CNOT1-208ENST00000565697 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
CNOT1-208ENST00000565697 LDHAL6AQ6ZMR3 332 aa12.44□□□□□ -0.42
CNOT1-208ENST00000565697 GPR101Q96P66 508 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-208ENST00000565697 COA1Q9GZY4 146 aa12.44□□□□□ -0.42
CNOT1-208ENST00000565697 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
CNOT1-208ENST00000565697 VIL1P09327 827 aaKnown RBP12.43□□□□□ -0.42
CNOT1-208ENST00000565697 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-208ENST00000565697 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
CNOT1-208ENST00000565697 USP44Q9H0E7 712 aa12.43□□□□□ -0.42
CNOT1-208ENST00000565697 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
CNOT1-208ENST00000565697 CNOT7Q9UIV1 285 aaKnown RBP12.43□□□□□ -0.42
CNOT1-208ENST00000565697 MICALL2Q8IY33 904 aa12.42□□□□□ -0.42
CNOT1-208ENST00000565697 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
CNOT1-208ENST00000565697 AGBL3Q8NEM8 1001 aa12.42□□□□□ -0.42
CNOT1-208ENST00000565697 ZC3H15Q8WU90 426 aaKnown RBP12.42□□□□□ -0.42
CNOT1-208ENST00000565697 KAZALD1Q96I82 304 aa12.42□□□□□ -0.42
CNOT1-208ENST00000565697 ADAMTSL1Q8N6G6 1762 aa12.42□□□□□ -0.42
CNOT1-208ENST00000565697 PASKQ96RG2 1323 aa12.41□□□□□ -0.42
CNOT1-208ENST00000565697 USP17L3A6NCW0 530 aa12.41□□□□□ -0.42
CNOT1-208ENST00000565697 USP17L4A6NCW7 530 aa12.41□□□□□ -0.42
CNOT1-208ENST00000565697 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-208ENST00000565697 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-208ENST00000565697 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
CNOT1-208ENST00000565697 USP17L1Q7RTZ2 530 aa12.41□□□□□ -0.42
CNOT1-208ENST00000565697 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-208ENST00000565697 MROH5Q6ZUA9 1318 aa12.4□□□□□ -0.42
CNOT1-208ENST00000565697 MYO3BQ8WXR4 1341 aa12.4□□□□□ -0.42
CNOT1-208ENST00000565697 TAF5LO75529 589 aa12.4□□□□□ -0.42
CNOT1-208ENST00000565697 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-208ENST00000565697 MMP14P50281 582 aa12.4□□□□□ -0.42
CNOT1-208ENST00000565697 INTS3Q68E01 1043 aaKnown RBP12.4□□□□□ -0.42
CNOT1-208ENST00000565697 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-208ENST00000565697 ATF7IPQ6VMQ6 1270 aa12.4□□□□□ -0.42
CNOT1-208ENST00000565697 ANKRD44Q8N8A2 993 aa12.4□□□□□ -0.42
CNOT1-208ENST00000565697 FRAT1Q92837 279 aaPredicted RBP12.4□□□□□ -0.42
CNOT1-208ENST00000565697 KCNQ5Q9NR82 932 aa12.4□□□□□ -0.42
CNOT1-208ENST00000565697 ZNF609O15014 1411 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 PLIN1O60240 522 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 GNAI3P08754 354 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 UBE4AQ14139 1066 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 STRIP1Q5VSL9 837 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 ZNF804AQ7Z570 1209 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 HELBQ8NG08 1087 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-208ENST00000565697 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms