RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 USP17L4A6NCW7 530 aa19.29■□□□□ 0.68
COMMD4-212ENST00000565517 H7C1D1 291 aa19.29■□□□□ 0.68
COMMD4-212ENST00000565517 UBE4AQ14139 1066 aa19.29■□□□□ 0.68
COMMD4-212ENST00000565517 USP17L1Q7RTZ2 530 aa19.29■□□□□ 0.68
COMMD4-212ENST00000565517 DZIP1LQ8IYY4 767 aaKnown RBP19.29■□□□□ 0.68
COMMD4-212ENST00000565517 TMEM57Q8N5G2 664 aa19.29■□□□□ 0.68
COMMD4-212ENST00000565517 FBXO3Q9UK99 471 aa19.29■□□□□ 0.68
COMMD4-212ENST00000565517 ZNF646O15015 1829 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-212ENST00000565517 SNAP23O00161 211 aa19.28■□□□□ 0.68
COMMD4-212ENST00000565517 PLIN1O60240 522 aa19.28■□□□□ 0.68
COMMD4-212ENST00000565517 APLP1P51693 650 aa19.28■□□□□ 0.68
COMMD4-212ENST00000565517 PTPN12Q05209 780 aaKnown RBP19.28■□□□□ 0.68
COMMD4-212ENST00000565517 LRRC24Q50LG9 513 aa19.28■□□□□ 0.68
COMMD4-212ENST00000565517 FTSJ3Q8IY81 847 aaKnown RBP19.28■□□□□ 0.68
COMMD4-212ENST00000565517 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
COMMD4-212ENST00000565517 CLEC11AQ9Y240 323 aa19.28■□□□□ 0.68
COMMD4-212ENST00000565517 ZBTB12Q9Y330 459 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-212ENST00000565517 KLRK1P26718 216 aa19.27■□□□□ 0.68
COMMD4-212ENST00000565517 RSBN1LQ6PCB5 846 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-212ENST00000565517 KLHDC4Q8TBB5 520 aa19.27■□□□□ 0.68
COMMD4-212ENST00000565517 CD209Q9NNX6 404 aa19.27■□□□□ 0.68
COMMD4-212ENST00000565517 EYA2O00167 538 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 PDE8BO95263 885 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 GNAI2P04899 355 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 MS4A1P11836 297 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 MTX1Q13505 466 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 STRIP1Q5VSL9 837 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 MICALL2Q8IY33 904 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 VGLL2Q8N8G2 317 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
COMMD4-212ENST00000565517 CIAO1O76071 339 aa19.25■□□□□ 0.67
COMMD4-212ENST00000565517 ZNF804AQ7Z570 1209 aa19.25■□□□□ 0.67
COMMD4-212ENST00000565517 GMLQ99445 158 aa19.25■□□□□ 0.67
COMMD4-212ENST00000565517 PGAP2Q9UHJ9 254 aa19.25■□□□□ 0.67
COMMD4-212ENST00000565517 ITGBL1O95965 494 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-212ENST00000565517 RLBP1P12271 317 aa19.24■□□□□ 0.67
COMMD4-212ENST00000565517 IL1R1P14778 569 aa19.24■□□□□ 0.67
COMMD4-212ENST00000565517 DACT2Q5SW24 774 aa19.24■□□□□ 0.67
COMMD4-212ENST00000565517 TTLL5Q6EMB2 1281 aa19.24■□□□□ 0.67
COMMD4-212ENST00000565517 CNTROBQ8N137 903 aa19.24■□□□□ 0.67
COMMD4-212ENST00000565517 ZC3H15Q8WU90 426 aaKnown RBP19.24■□□□□ 0.67
COMMD4-212ENST00000565517 COPRSQ9NQ92 184 aa19.24■□□□□ 0.67
COMMD4-212ENST00000565517 MYO3BQ8WXR4 1341 aa19.24■□□□□ 0.67
COMMD4-212ENST00000565517 MMP14P50281 582 aa19.23■□□□□ 0.67
COMMD4-212ENST00000565517 ATG9AQ7Z3C6 839 aa19.23■□□□□ 0.67
COMMD4-212ENST00000565517 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
COMMD4-212ENST00000565517 SHTN1A0MZ66 631 aa19.22■□□□□ 0.67
COMMD4-212ENST00000565517 ZBTB7BO15156 539 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-212ENST00000565517 SRGAP3O43295 1099 aa19.22■□□□□ 0.67
COMMD4-212ENST00000565517 HIRAP54198 1017 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-212ENST00000565517 ZNF280AP59817 542 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-212ENST00000565517 MAP1SQ66K74 1059 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-212ENST00000565517 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
COMMD4-212ENST00000565517 TRPM4Q8TD43 1214 aa19.22■□□□□ 0.67
COMMD4-212ENST00000565517 POLR2AP24928 1970 aaKnown RBP19.22■□□□□ 0.67
COMMD4-212ENST00000565517 USP17L8P0C7I0 530 aa19.21■□□□□ 0.67
COMMD4-212ENST00000565517 HIBADHP31937 336 aaKnown RBP19.21■□□□□ 0.67
COMMD4-212ENST00000565517 IL15P40933 162 aaPredicted RBP19.21■□□□□ 0.67
COMMD4-212ENST00000565517 PUM3Q15397 648 aaKnown RBP19.21■□□□□ 0.67
COMMD4-212ENST00000565517 SAMD7Q7Z3H4 446 aa19.21■□□□□ 0.67
COMMD4-212ENST00000565517 FAM84BQ96KN1 310 aaPredicted RBP19.21■□□□□ 0.67
COMMD4-212ENST00000565517 SASH1O94885 1247 aa19.2■□□□□ 0.66
COMMD4-212ENST00000565517 FGFR2P21802 821 aa19.2■□□□□ 0.66
COMMD4-212ENST00000565517 GTF2IP78347 998 aa19.2■□□□□ 0.66
COMMD4-212ENST00000565517 FBXO33Q7Z6M2 555 aa19.2■□□□□ 0.66
COMMD4-212ENST00000565517 TDRD7Q8NHU6 1098 aaKnown RBP19.2■□□□□ 0.66
COMMD4-212ENST00000565517 CEP126Q9P2H0 1117 aa19.2■□□□□ 0.66
COMMD4-212ENST00000565517 TRPM7Q96QT4 1865 aa19.2■□□□□ 0.66
COMMD4-212ENST00000565517 IFIT1P09914 478 aaKnown RBP19.19■□□□□ 0.66
COMMD4-212ENST00000565517 GYG1P46976 350 aa19.19■□□□□ 0.66
COMMD4-212ENST00000565517 FKBP1AP62942 108 aaKnown RBP19.19■□□□□ 0.66
COMMD4-212ENST00000565517 CAVIN4Q5BKX8 364 aa19.19■□□□□ 0.66
COMMD4-212ENST00000565517 PANK1Q8TE04 598 aa19.19■□□□□ 0.66
COMMD4-212ENST00000565517 LPIN2Q92539 896 aa19.19■□□□□ 0.66
COMMD4-212ENST00000565517 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
COMMD4-212ENST00000565517 SIL1Q9H173 461 aa19.19■□□□□ 0.66
COMMD4-212ENST00000565517 PA2G4Q9UQ80 394 aaKnown RBP19.19■□□□□ 0.66
COMMD4-212ENST00000565517 EGFRP00533 1210 aa19.18■□□□□ 0.66
COMMD4-212ENST00000565517 KIF4BQ2VIQ3 1234 aa19.18■□□□□ 0.66
COMMD4-212ENST00000565517 TBC1D10BQ4KMP7 808 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-212ENST00000565517 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
COMMD4-212ENST00000565517 FAM205AQ6ZU69 1335 aa19.18■□□□□ 0.66
COMMD4-212ENST00000565517 CEP350Q5VT06 3117 aa19.17■□□□□ 0.66
COMMD4-212ENST00000565517 ATP8B2P98198 1209 aa19.17■□□□□ 0.66
COMMD4-212ENST00000565517 RBM26Q5T8P6 1007 aaKnown RBP19.17■□□□□ 0.66
COMMD4-212ENST00000565517 VPS37DQ86XT2 251 aa19.17■□□□□ 0.66
COMMD4-212ENST00000565517 DNAJC5GQ8N7S2 189 aa19.17■□□□□ 0.66
COMMD4-212ENST00000565517 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-212ENST00000565517 MXD3Q9BW11 206 aa19.17■□□□□ 0.66
COMMD4-212ENST00000565517 MYOZ2Q9NPC6 264 aa19.17■□□□□ 0.66
COMMD4-212ENST00000565517 CREBZFQ9NS37 354 aa19.17■□□□□ 0.66
COMMD4-212ENST00000565517 PNMA6EA0A0J9YXQ4 647 aa19.16■□□□□ 0.66
COMMD4-212ENST00000565517 SLC5A1P13866 664 aa19.16■□□□□ 0.66
COMMD4-212ENST00000565517 POLA2Q14181 598 aa19.16■□□□□ 0.66
COMMD4-212ENST00000565517 CDC37L1Q7L3B6 337 aa19.16■□□□□ 0.66
COMMD4-212ENST00000565517 MYH13Q9UKX3 1938 aa19.15■□□□□ 0.66
COMMD4-212ENST00000565517 PDE3AQ14432 1141 aa19.15■□□□□ 0.66
COMMD4-212ENST00000565517 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
COMMD4-212ENST00000565517 SSH3Q8TE77 659 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms