RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TNS4Q8IZW8 715 aa25.21■■□□□ 1.63
CLN6-206ENST00000565471 USP17L8P0C7I0 530 aa25.2■■□□□ 1.62
CLN6-206ENST00000565471 CTCFP49711 727 aaPredicted RBP25.2■■□□□ 1.62
CLN6-206ENST00000565471 CYP4F22Q6NT55 531 aa25.2■■□□□ 1.62
CLN6-206ENST00000565471 SRCIN1Q9C0H9 1055 aa25.2■■□□□ 1.62
CLN6-206ENST00000565471 ZNF408Q9H9D4 720 aa25.2■■□□□ 1.62
CLN6-206ENST00000565471 ZNF646O15015 1829 aaPredicted RBP25.19■■□□□ 1.62
CLN6-206ENST00000565471 CHRNDQ07001 517 aa25.19■■□□□ 1.62
CLN6-206ENST00000565471 TXNRD3Q86VQ6 643 aa25.19■■□□□ 1.62
CLN6-206ENST00000565471 PRDM10Q9NQV6 1147 aa25.19■■□□□ 1.62
CLN6-206ENST00000565471 C9orf78Q9NZ63 289 aaPredicted RBP25.19■■□□□ 1.62
CLN6-206ENST00000565471 POLR2AP24928 1970 aaKnown RBP25.18■■□□□ 1.62
CLN6-206ENST00000565471 MYO3BQ8WXR4 1341 aa25.18■■□□□ 1.62
CLN6-206ENST00000565471 STRIP1Q5VSL9 837 aa25.18■■□□□ 1.62
CLN6-206ENST00000565471 SLC4A10Q6U841 1118 aa25.18■■□□□ 1.62
CLN6-206ENST00000565471 LMBR1LQ6UX01 489 aa25.18■■□□□ 1.62
CLN6-206ENST00000565471 GGA3Q9NZ52 723 aa25.18■■□□□ 1.62
CLN6-206ENST00000565471 EPHA10Q5JZY3 1008 aa25.17■■□□□ 1.62
CLN6-206ENST00000565471 DACT2Q5SW24 774 aa25.17■■□□□ 1.62
CLN6-206ENST00000565471 MRPL50Q8N5N7 158 aaKnown RBP25.17■■□□□ 1.62
CLN6-206ENST00000565471 MYOZ2Q9NPC6 264 aa25.17■■□□□ 1.62
CLN6-206ENST00000565471 CHMP3Q9Y3E7 222 aa25.17■■□□□ 1.62
CLN6-206ENST00000565471 A0A1B0GUL6 1792 aa25.16■■□□□ 1.62
CLN6-206ENST00000565471 ADM5C9JUS6 153 aa25.16■■□□□ 1.62
CLN6-206ENST00000565471 MAP2K2P36507 400 aa25.16■■□□□ 1.62
CLN6-206ENST00000565471 KCNJ4P48050 445 aa25.16■■□□□ 1.62
CLN6-206ENST00000565471 SLFN5Q08AF3 891 aa25.16■■□□□ 1.62
CLN6-206ENST00000565471 SULF1Q8IWU6 871 aa25.16■■□□□ 1.62
CLN6-206ENST00000565471 PTPRCP08575 1304 aa25.15■■□□□ 1.62
CLN6-206ENST00000565471 KLRK1P26718 216 aa25.15■■□□□ 1.62
CLN6-206ENST00000565471 GRM1Q13255 1194 aa25.15■■□□□ 1.62
CLN6-206ENST00000565471 SCARF1Q14162 830 aa25.15■■□□□ 1.62
CLN6-206ENST00000565471 CCDC57Q2TAC2 916 aa25.15■■□□□ 1.62
CLN6-206ENST00000565471 DLK2Q6UY11 383 aa25.15■■□□□ 1.62
CLN6-206ENST00000565471 C15orf52Q6ZUT6 534 aaKnown RBP25.15■■□□□ 1.62
CLN6-206ENST00000565471 ASTN2O75129 1339 aaPredicted RBP25.14■■□□□ 1.62
CLN6-206ENST00000565471 MMP14P50281 582 aa25.14■■□□□ 1.62
CLN6-206ENST00000565471 UTYO14607 1347 aa25.13■■□□□ 1.61
CLN6-206ENST00000565471 PITPNM2Q9BZ72 1349 aa25.13■■□□□ 1.61
CLN6-206ENST00000565471 IRS2Q9Y4H2 1338 aa25.13■■□□□ 1.61
CLN6-206ENST00000565471 CCER2I3L3R5 266 aa25.13■■□□□ 1.61
CLN6-206ENST00000565471 ANGEL2Q5VTE6 544 aaKnown RBP25.13■■□□□ 1.61
CLN6-206ENST00000565471 GBA2Q9HCG7 927 aaPredicted RBP25.13■■□□□ 1.61
CLN6-206ENST00000565471 HUNKP57058 714 aa25.12■■□□□ 1.61
CLN6-206ENST00000565471 TAF7LQ5H9L4 462 aa25.12■■□□□ 1.61
CLN6-206ENST00000565471 TTLL5Q6EMB2 1281 aa25.12■■□□□ 1.61
CLN6-206ENST00000565471 OGFOD1Q8N543 542 aa25.12■■□□□ 1.61
CLN6-206ENST00000565471 FBXW7Q969H0 707 aa25.12■■□□□ 1.61
CLN6-206ENST00000565471 AOC2O75106 756 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 TAF5LO75529 589 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 HSPA8P11142 646 aaKnown RBP25.11■■□□□ 1.61
CLN6-206ENST00000565471 LDHAL6AQ6ZMR3 332 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 C2orf69Q8N8R5 385 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 SSH1Q8WYL5 1049 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 SUCLG2Q96I99 432 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 BEGAINQ9BUH8 593 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 MXD3Q9BW11 206 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 CD209Q9NNX6 404 aa25.11■■□□□ 1.61
CLN6-206ENST00000565471 NBPF7P0C2Y1 421 aaPredicted RBP25.1■■□□□ 1.61
CLN6-206ENST00000565471 LBX1P52954 281 aa25.1■■□□□ 1.61
CLN6-206ENST00000565471 HELBQ8NG08 1087 aaPredicted RBP25.1■■□□□ 1.61
CLN6-206ENST00000565471 CDCA5Q96FF9 252 aa25.1■■□□□ 1.61
CLN6-206ENST00000565471 KAZALD1Q96I82 304 aa25.1■■□□□ 1.61
CLN6-206ENST00000565471 ZNF594Q96JF6 807 aaPredicted RBP25.1■■□□□ 1.61
CLN6-206ENST00000565471 ALDH1L2Q3SY69 923 aa25.09■■□□□ 1.61
CLN6-206ENST00000565471 TRMT2AQ8IZ69 625 aaKnown RBP25.09■■□□□ 1.61
CLN6-206ENST00000565471 CNNM1Q9NRU3 951 aa25.09■■□□□ 1.61
CLN6-206ENST00000565471 SNAP23O00161 211 aa25.08■■□□□ 1.61
CLN6-206ENST00000565471 GTF2IP78347 998 aa25.08■■□□□ 1.61
CLN6-206ENST00000565471 NOGQ13253 232 aa25.08■■□□□ 1.61
CLN6-206ENST00000565471 CDCA7LQ96GN5 454 aa25.08■■□□□ 1.61
CLN6-206ENST00000565471 BRPF1P55201 1214 aaPredicted RBP25.07■■□□□ 1.6
CLN6-206ENST00000565471 RABL6Q3YEC7 729 aaPredicted RBP25.07■■□□□ 1.6
CLN6-206ENST00000565471 RGMBQ6NW40 437 aa25.07■■□□□ 1.6
CLN6-206ENST00000565471 ZNF804AQ7Z570 1209 aa25.07■■□□□ 1.6
CLN6-206ENST00000565471 IL1R1P14778 569 aa25.06■■□□□ 1.6
CLN6-206ENST00000565471 NBPF9Q3BBW0 867 aa25.06■■□□□ 1.6
CLN6-206ENST00000565471 HDAC9Q9UKV0 1011 aa25.06■■□□□ 1.6
CLN6-206ENST00000565471 WNT10BO00744 389 aa25.05■■□□□ 1.6
CLN6-206ENST00000565471 CA12O43570 354 aa25.05■■□□□ 1.6
CLN6-206ENST00000565471 CT47B1P0C2W7 299 aaPredicted RBP25.05■■□□□ 1.6
CLN6-206ENST00000565471 KIAA0825Q8IV33 1275 aa25.05■■□□□ 1.6
CLN6-206ENST00000565471 FKBP1BP68106 108 aa25.04■■□□□ 1.6
CLN6-206ENST00000565471 CCDC102AQ96A19 550 aa25.04■■□□□ 1.6
CLN6-206ENST00000565471 BICC1Q9H694 974 aaKnown RBP25.04■■□□□ 1.6
CLN6-206ENST00000565471 PAPPA2Q9BXP8 1791 aa25.03■■□□□ 1.6
CLN6-206ENST00000565471 FAM155AB1AL88 458 aaPredicted RBP25.03■■□□□ 1.6
CLN6-206ENST00000565471 UBE4AQ14139 1066 aa25.03■■□□□ 1.6
CLN6-206ENST00000565471 PLIN1O60240 522 aa25.02■■□□□ 1.6
CLN6-206ENST00000565471 FKBP1AP62942 108 aaKnown RBP25.02■■□□□ 1.6
CLN6-206ENST00000565471 ANKRD44Q8N8A2 993 aa25.02■■□□□ 1.6
CLN6-206ENST00000565471 ZBED3Q96IU2 234 aaPredicted RBP25.02■■□□□ 1.6
CLN6-206ENST00000565471 SMC4Q9NTJ3 1288 aa25.02■■□□□ 1.6
CLN6-206ENST00000565471 MROH5Q6ZUA9 1318 aa25.02■■□□□ 1.6
CLN6-206ENST00000565471 SASH1O94885 1247 aa25.01■■□□□ 1.59
CLN6-206ENST00000565471 ZNF157P51786 506 aaPredicted RBP25.01■■□□□ 1.59
CLN6-206ENST00000565471 CERS5Q8N5B7 392 aa25.01■■□□□ 1.59
CLN6-206ENST00000565471 PUS3Q9BZE2 481 aaKnown RBP25.01■■□□□ 1.59
CLN6-206ENST00000565471 USP44Q9H0E7 712 aa25.01■■□□□ 1.59
CLN6-206ENST00000565471 RIPOR2Q9Y4F9 1068 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms