RNA–Protein interactions for RNA: ENST00000565018.6

TCF4-226, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-226ENST00000565018 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
TCF4-226ENST00000565018 MTMR6Q9Y217 621 aa10.88□□□□□ -0.67
TCF4-226ENST00000565018 CNTNAP4Q9C0A0 1308 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 NTSR2O95665 410 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 UQCRFS1P1P0C7P4 283 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 EXOSC10Q01780 885 aaKnown RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 PUM3Q15397 648 aaKnown RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 ZSCAN23Q3MJ62 389 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 ZSCAN25Q6NSZ9 544 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 DHX32Q7L7V1 743 aaKnown RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 GTF3C6Q969F1 213 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 OSBP2Q969R2 916 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 ACSBG1Q96GR2 724 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 SCN7AQ01118 1682 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 KAT6BQ8WYB5 2073 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 MCAMP43121 646 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 STOX1Q6ZVD7 989 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 CCDC85AQ96PX6 553 aaPredicted RBP10.87□□□□□ -0.67
TCF4-226ENST00000565018 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.87□□□□□ -0.672e-6■■■■□ 26.4
TCF4-226ENST00000565018 LAMA4Q16363 1823 aa10.87□□□□□ -0.67
TCF4-226ENST00000565018 SPATA31A6Q5VVP1 1343 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 M0R2C6 588 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 ZAP70P43403 619 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 FKBP4Q02790 459 aaKnown RBP eCLIP10.86□□□□□ -0.67
TCF4-226ENST00000565018 SCARF1Q14162 830 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 UBE3CQ15386 1083 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 CSPP1Q1MSJ5 1256 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 CAVIN1Q6NZI2 390 aaKnown RBP10.86□□□□□ -0.67
TCF4-226ENST00000565018 CHMP4CQ96CF2 233 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 LLPHQ9BRT6 129 aaKnown RBP10.86□□□□□ -0.67
TCF4-226ENST00000565018 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
TCF4-226ENST00000565018 EVCP57679 992 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 CCDC152Q4G0S7 254 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
TCF4-226ENST00000565018 LARP6Q9BRS8 491 aaKnown RBP10.85□□□□□ -0.67
TCF4-226ENST00000565018 DOCK2Q92608 1830 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 FOXP2O15409 715 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 ADD2P35612 726 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 Q6ZUG5 572 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 SYAP1Q96A49 352 aaPredicted RBP10.85□□□□□ -0.67
TCF4-226ENST00000565018 TMEM63CQ9P1W3 806 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 CCDC9Q9Y3X0 531 aaKnown RBP10.85□□□□□ -0.67
TCF4-226ENST00000565018 WDR19Q8NEZ3 1342 aa10.85□□□□□ -0.67
TCF4-226ENST00000565018 E7EWF7 191 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 PFKFB2O60825 505 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 NECAB1Q8N987 351 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 SMARCC2Q8TAQ2 1214 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 ZMYM6O95789 1325 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 KCNQ2O43526 872 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 NCLP19338 710 aaKnown RBP10.84□□□□□ -0.67
TCF4-226ENST00000565018 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
TCF4-226ENST00000565018 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
TCF4-226ENST00000565018 LARP1BQ659C4 914 aaKnown RBP10.84□□□□□ -0.67
TCF4-226ENST00000565018 USP48Q86UV5 1035 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
TCF4-226ENST00000565018 CHAMP1Q96JM3 812 aa10.84□□□□□ -0.67
TCF4-226ENST00000565018 NIP7Q9Y221 180 aaKnown RBP eCLIP10.84□□□□□ -0.67
TCF4-226ENST00000565018 SLC5A1P13866 664 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 UBE2HP62256 183 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 SF3B3Q15393 1217 aaKnown RBP10.83□□□□□ -0.68
TCF4-226ENST00000565018 IMMTQ16891 758 aaKnown RBP10.83□□□□□ -0.68
TCF4-226ENST00000565018 SLFNL1Q499Z3 407 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 LRSAM1Q6UWE0 723 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 ZNF274Q96GC6 653 aaPredicted RBP10.83□□□□□ -0.68
TCF4-226ENST00000565018 TCEANC2Q96MN5 208 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 NSFL1CQ9UNZ2 370 aaKnown RBP10.83□□□□□ -0.68
TCF4-226ENST00000565018 ELP1O95163 1332 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 COL24A1Q17RW2 1714 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 UBAP1LF5GYI3 381 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 LINC00116Q8NCU8 138 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 NGLY1Q96IV0 654 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 MPHOSPH8Q99549 860 aa10.83□□□□□ -0.68
TCF4-226ENST00000565018 PUS7LQ9H0K6 701 aaKnown RBP10.83□□□□□ -0.68
TCF4-226ENST00000565018 GPAA1O43292 621 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 PHF14O94880 888 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 HCLS1P14317 486 aaPredicted RBP10.82□□□□□ -0.68
TCF4-226ENST00000565018 IGHMBP2P38935 993 aaKnown RBP10.82□□□□□ -0.68
TCF4-226ENST00000565018 HMGN5P82970 282 aaKnown RBP10.82□□□□□ -0.68
TCF4-226ENST00000565018 WASHC4Q2M389 1173 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 SLC10A5Q5PT55 438 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 RGS22Q8NE09 1264 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 PANK2Q9BZ23 570 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 TCHHQ07283 1943 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 TCRBV5S4A2TA0A5A2 114 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 FGAP02671 866 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 PHKA1P46020 1223 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 PI16Q6UXB8 463 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 BRF1Q92994 677 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 C8orf37Q96NL8 207 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 CDC5LQ99459 802 aaKnown RBP10.82□□□□□ -0.68
TCF4-226ENST00000565018 CNPY2Q9Y2B0 182 aa10.82□□□□□ -0.68
TCF4-226ENST00000565018 A0A1B0GUL6 1792 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms