RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 FSTL1Q12841 308 aa23.21■■□□□ 1.31
PKD1-229ENST00000564890 C15orf52Q6ZUT6 534 aaKnown RBP23.21■■□□□ 1.31
PKD1-229ENST00000564890 ZBTB12Q9Y330 459 aaPredicted RBP23.21■■□□□ 1.31
PKD1-229ENST00000564890 IRS2Q9Y4H2 1338 aa23.21■■□□□ 1.31
PKD1-229ENST00000564890 EYA2O00167 538 aa23.2■■□□□ 1.3
PKD1-229ENST00000564890 SRGAP3O43295 1099 aa23.19■■□□□ 1.3
PKD1-229ENST00000564890 VIL1P09327 827 aaKnown RBP23.19■■□□□ 1.3
PKD1-229ENST00000564890 MTX1Q13505 466 aa23.19■■□□□ 1.3
PKD1-229ENST00000564890 UBE4AQ14139 1066 aa23.19■■□□□ 1.3
PKD1-229ENST00000564890 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
PKD1-229ENST00000564890 SIL1Q9H173 461 aa23.19■■□□□ 1.3
PKD1-229ENST00000564890 USP17L3A6NCW0 530 aa23.18■■□□□ 1.3
PKD1-229ENST00000564890 USP17L4A6NCW7 530 aa23.18■■□□□ 1.3
PKD1-229ENST00000564890 ZBTB7BO15156 539 aaPredicted RBP23.18■■□□□ 1.3
PKD1-229ENST00000564890 USP17L1Q7RTZ2 530 aa23.18■■□□□ 1.3
PKD1-229ENST00000564890 LDHDQ86WU2 507 aa23.18■■□□□ 1.3
PKD1-229ENST00000564890 VGLL2Q8N8G2 317 aa23.18■■□□□ 1.3
PKD1-229ENST00000564890 PA2G4Q9UQ80 394 aaKnown RBP23.18■■□□□ 1.3
PKD1-229ENST00000564890 CIAO1O76071 339 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 PDE8BO95263 885 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 RPS12P25398 132 aaKnown RBP23.17■■□□□ 1.3
PKD1-229ENST00000564890 CHADLQ6NUI6 762 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 ATG9AQ7Z3C6 839 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 ZNF804AQ7Z570 1209 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 DPF2Q92785 391 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 FBXW7Q969H0 707 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 ADARB2Q9NS39 739 aaKnown RBP23.17■■□□□ 1.3
PKD1-229ENST00000564890 CNOT7Q9UIV1 285 aaKnown RBP23.17■■□□□ 1.3
PKD1-229ENST00000564890 FBXO3Q9UK99 471 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
PKD1-229ENST00000564890 SHTN1A0MZ66 631 aa23.16■■□□□ 1.3
PKD1-229ENST00000564890 RSBN1LQ6PCB5 846 aaPredicted RBP23.16■■□□□ 1.3
PKD1-229ENST00000564890 MICALL2Q8IY33 904 aa23.16■■□□□ 1.3
PKD1-229ENST00000564890 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.16■■□□□ 1.3
PKD1-229ENST00000564890 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
PKD1-229ENST00000564890 CD209Q9NNX6 404 aa23.16■■□□□ 1.3
PKD1-229ENST00000564890 COPRSQ9NQ92 184 aa23.16■■□□□ 1.3
PKD1-229ENST00000564890 PSME4Q14997 1843 aa23.16■■□□□ 1.3
PKD1-229ENST00000564890 H7C1D1 291 aa23.15■■□□□ 1.3
PKD1-229ENST00000564890 USP50Q70EL3 339 aaPredicted RBP23.15■■□□□ 1.3
PKD1-229ENST00000564890 PNMA6EA0A0J9YXQ4 647 aa23.14■■□□□ 1.29
PKD1-229ENST00000564890 HSPA6P17066 643 aa23.14■■□□□ 1.29
PKD1-229ENST00000564890 MVPQ14764 893 aaKnown RBP23.14■■□□□ 1.29
PKD1-229ENST00000564890 STRIP1Q5VSL9 837 aa23.14■■□□□ 1.29
PKD1-229ENST00000564890 AGBL3Q8NEM8 1001 aa23.14■■□□□ 1.29
PKD1-229ENST00000564890 COG6Q9Y2V7 657 aa23.14■■□□□ 1.29
PKD1-229ENST00000564890 ADAMTSL1Q8N6G6 1762 aa23.14■■□□□ 1.29
PKD1-229ENST00000564890 IL15P40933 162 aaPredicted RBP23.13■■□□□ 1.29
PKD1-229ENST00000564890 GYG1P46976 350 aa23.13■■□□□ 1.29
PKD1-229ENST00000564890 PUM3Q15397 648 aaKnown RBP23.13■■□□□ 1.29
PKD1-229ENST00000564890 DACT2Q5SW24 774 aa23.13■■□□□ 1.29
PKD1-229ENST00000564890 ZNF609O15014 1411 aa23.13■■□□□ 1.29
PKD1-229ENST00000564890 IL1R1P14778 569 aa23.12■■□□□ 1.29
PKD1-229ENST00000564890 GTF2IP78347 998 aa23.12■■□□□ 1.29
PKD1-229ENST00000564890 TTLL5Q6EMB2 1281 aa23.12■■□□□ 1.29
PKD1-229ENST00000564890 TRPM4Q8TD43 1214 aa23.12■■□□□ 1.29
PKD1-229ENST00000564890 FAM84BQ96KN1 310 aaPredicted RBP23.12■■□□□ 1.29
PKD1-229ENST00000564890 MXD3Q9BW11 206 aa23.12■■□□□ 1.29
PKD1-229ENST00000564890 CEP126Q9P2H0 1117 aa23.12■■□□□ 1.29
PKD1-229ENST00000564890 FGFR2P21802 821 aa23.11■■□□□ 1.29
PKD1-229ENST00000564890 HIBADHP31937 336 aaKnown RBP23.11■■□□□ 1.29
PKD1-229ENST00000564890 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
PKD1-229ENST00000564890 C20orf194Q5TEA3 1177 aa23.11■■□□□ 1.29
PKD1-229ENST00000564890 GMLQ99445 158 aa23.11■■□□□ 1.29
PKD1-229ENST00000564890 DDX19BQ9UMR2 479 aa23.11■■□□□ 1.29
PKD1-229ENST00000564890 IFIT1P09914 478 aaKnown RBP23.1■■□□□ 1.29
PKD1-229ENST00000564890 SLC5A1P13866 664 aa23.1■■□□□ 1.29
PKD1-229ENST00000564890 PDE3AQ14432 1141 aa23.1■■□□□ 1.29
PKD1-229ENST00000564890 SAMD7Q7Z3H4 446 aa23.1■■□□□ 1.29
PKD1-229ENST00000564890 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
PKD1-229ENST00000564890 MYO3BQ8WXR4 1341 aa23.09■■□□□ 1.29
PKD1-229ENST00000564890 HIRAP54198 1017 aaPredicted RBP23.09■■□□□ 1.29
PKD1-229ENST00000564890 POLA2Q14181 598 aa23.09■■□□□ 1.29
PKD1-229ENST00000564890 TBC1D10BQ4KMP7 808 aaPredicted RBP23.09■■□□□ 1.29
PKD1-229ENST00000564890 CAVIN4Q5BKX8 364 aa23.09■■□□□ 1.29
PKD1-229ENST00000564890 MAP1SQ66K74 1059 aaPredicted RBP23.09■■□□□ 1.29
PKD1-229ENST00000564890 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
PKD1-229ENST00000564890 LPIN2Q92539 896 aa23.09■■□□□ 1.29
PKD1-229ENST00000564890 USP17L8P0C7I0 530 aa23.08■■□□□ 1.29
PKD1-229ENST00000564890 ZNF280AP59817 542 aaPredicted RBP23.08■■□□□ 1.29
PKD1-229ENST00000564890 ATP2B3Q16720 1220 aa23.08■■□□□ 1.29
PKD1-229ENST00000564890 RBM26Q5T8P6 1007 aaKnown RBP23.08■■□□□ 1.29
PKD1-229ENST00000564890 FBXO33Q7Z6M2 555 aa23.08■■□□□ 1.29
PKD1-229ENST00000564890 TDRD7Q8NHU6 1098 aaKnown RBP23.08■■□□□ 1.29
PKD1-229ENST00000564890 SSH3Q8TE77 659 aa23.08■■□□□ 1.29
PKD1-229ENST00000564890 EGFRP00533 1210 aa23.07■■□□□ 1.28
PKD1-229ENST00000564890 CNTROBQ8N137 903 aa23.07■■□□□ 1.28
PKD1-229ENST00000564890 JAG2Q9Y219 1238 aa23.07■■□□□ 1.28
PKD1-229ENST00000564890 SASH1O94885 1247 aa23.06■■□□□ 1.28
PKD1-229ENST00000564890 BCAMP50895 628 aa23.06■■□□□ 1.28
PKD1-229ENST00000564890 TFCP2Q12800 502 aa23.06■■□□□ 1.28
PKD1-229ENST00000564890 G3BP1Q13283 466 aaKnown RBP eCLIP23.06■■□□□ 1.28
PKD1-229ENST00000564890 KIF4BQ2VIQ3 1234 aa23.06■■□□□ 1.28
PKD1-229ENST00000564890 CEP85Q6P2H3 762 aa23.06■■□□□ 1.28
PKD1-229ENST00000564890 ITGBL1O95965 494 aaPredicted RBP23.05■■□□□ 1.28
PKD1-229ENST00000564890 APLP1P51693 650 aa23.05■■□□□ 1.28
PKD1-229ENST00000564890 CERS5Q8N5B7 392 aa23.05■■□□□ 1.28
PKD1-229ENST00000564890 ZC3H15Q8WU90 426 aaKnown RBP23.05■■□□□ 1.28
PKD1-229ENST00000564890 CHMP4BQ9H444 224 aaKnown RBP23.05■■□□□ 1.28
PKD1-229ENST00000564890 ZBTB40Q9NUA8 1239 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms