RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 USP17L8P0C7I0 530 aa20.42■□□□□ 0.86
CDH11-210ENST00000564770 ZNF157P51786 506 aaPredicted RBP20.42■□□□□ 0.86
CDH11-210ENST00000564770 KIF23Q02241 960 aaPredicted RBP20.42■□□□□ 0.86
CDH11-210ENST00000564770 NEXNQ0ZGT2 675 aa20.42■□□□□ 0.86
CDH11-210ENST00000564770 USP17L1Q7RTZ2 530 aa20.42■□□□□ 0.86
CDH11-210ENST00000564770 CHMP4AQ9BY43 222 aa20.42■□□□□ 0.86
CDH11-210ENST00000564770 BSDC1Q9NW68 430 aaPredicted RBP20.42■□□□□ 0.86
CDH11-210ENST00000564770 H7C1W4 665 aa20.41■□□□□ 0.86
CDH11-210ENST00000564770 CCT4P50991 539 aaKnown RBP20.41■□□□□ 0.86
CDH11-210ENST00000564770 CASP7P55210 303 aa20.41■□□□□ 0.86
CDH11-210ENST00000564770 DACT2Q5SW24 774 aa20.41■□□□□ 0.86
CDH11-210ENST00000564770 TXNRD3Q86VQ6 643 aa20.41■□□□□ 0.86
CDH11-210ENST00000564770 PITPNM2Q9BZ72 1349 aa20.41■□□□□ 0.86
CDH11-210ENST00000564770 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
CDH11-210ENST00000564770 KLRK1P26718 216 aa20.4■□□□□ 0.86
CDH11-210ENST00000564770 CCDC102AQ96A19 550 aa20.4■□□□□ 0.86
CDH11-210ENST00000564770 IL16Q14005 1332 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 FLIIQ13045 1269 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 DGKZQ13574 1117 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 GCKRQ14397 625 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 NBPF9Q3BBW0 867 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 RASAL3Q86YV0 1011 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.85
CDH11-210ENST00000564770 MOB2Q70IA6 237 aa20.38■□□□□ 0.85
CDH11-210ENST00000564770 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
CDH11-210ENST00000564770 ITGA6P23229 1130 aa20.37■□□□□ 0.85
CDH11-210ENST00000564770 RNF186Q9NXI6 227 aa20.37■□□□□ 0.85
CDH11-210ENST00000564770 HTTP42858 3142 aa20.36■□□□□ 0.85
CDH11-210ENST00000564770 TRPA1O75762 1119 aa20.36■□□□□ 0.85
CDH11-210ENST00000564770 RGS19P49795 217 aa20.36■□□□□ 0.85
CDH11-210ENST00000564770 FKBP5Q13451 457 aaPredicted RBP20.36■□□□□ 0.85
CDH11-210ENST00000564770 PRAMEF18Q5VWM3 479 aa20.36■□□□□ 0.85
CDH11-210ENST00000564770 FBXW7Q969H0 707 aa20.36■□□□□ 0.85
CDH11-210ENST00000564770 CSRNP1Q96S65 589 aa20.36■□□□□ 0.85
CDH11-210ENST00000564770 LAMB1P07942 1786 aa20.36■□□□□ 0.85
CDH11-210ENST00000564770 WNT10BO00744 389 aa20.35■□□□□ 0.85
CDH11-210ENST00000564770 SASH1O94885 1247 aa20.35■□□□□ 0.85
CDH11-210ENST00000564770 IGHMBP2P38935 993 aaKnown RBP20.35■□□□□ 0.85
CDH11-210ENST00000564770 STRIP1Q5VSL9 837 aa20.35■□□□□ 0.85
CDH11-210ENST00000564770 DNAAF4Q8WXU2 420 aa20.35■□□□□ 0.85
CDH11-210ENST00000564770 COA1Q9GZY4 146 aa20.35■□□□□ 0.85
CDH11-210ENST00000564770 ARAP2Q8WZ64 1704 aa20.35■□□□□ 0.85
CDH11-210ENST00000564770 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
CDH11-210ENST00000564770 MYO3BQ8WXR4 1341 aa20.34■□□□□ 0.85
CDH11-210ENST00000564770 IRS2Q9Y4H2 1338 aa20.34■□□□□ 0.85
CDH11-210ENST00000564770 CSF1RP07333 972 aa20.34■□□□□ 0.85
CDH11-210ENST00000564770 FKBP1BP68106 108 aa20.34■□□□□ 0.85
CDH11-210ENST00000564770 LEMD3Q9Y2U8 911 aa20.34■□□□□ 0.85
CDH11-210ENST00000564770 MLLT1Q03111 559 aaPredicted RBP20.33■□□□□ 0.85
CDH11-210ENST00000564770 LINS1Q8NG48 757 aa20.33■□□□□ 0.85
CDH11-210ENST00000564770 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
CDH11-210ENST00000564770 SNAP23O00161 211 aa20.32■□□□□ 0.84
CDH11-210ENST00000564770 CHRNDQ07001 517 aa20.32■□□□□ 0.84
CDH11-210ENST00000564770 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
CDH11-210ENST00000564770 MRS2Q9HD23 443 aa20.32■□□□□ 0.84
CDH11-210ENST00000564770 UBE2Q2LH0YL09 131 aa20.31■□□□□ 0.84
CDH11-210ENST00000564770 VAMP4O75379 141 aa20.31■□□□□ 0.84
CDH11-210ENST00000564770 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
CDH11-210ENST00000564770 MPHOSPH8Q99549 860 aa20.31■□□□□ 0.84
CDH11-210ENST00000564770 SALL2Q9Y467 1007 aaPredicted RBP20.31■□□□□ 0.84
CDH11-210ENST00000564770 CENPFP49454 3210 aa20.31■□□□□ 0.84
CDH11-210ENST00000564770 SSC5DA1L4H1 1573 aa20.3■□□□□ 0.84
CDH11-210ENST00000564770 F6X3S4 739 aa20.3■□□□□ 0.84
CDH11-210ENST00000564770 GTF2IP78347 998 aa20.3■□□□□ 0.84
CDH11-210ENST00000564770 KIAA0825Q8IV33 1275 aa20.3■□□□□ 0.84
CDH11-210ENST00000564770 OGFOD1Q8N543 542 aa20.3■□□□□ 0.84
CDH11-210ENST00000564770 ZBED3Q96IU2 234 aaPredicted RBP20.3■□□□□ 0.84
CDH11-210ENST00000564770 ANKRD2Q9GZV1 360 aa20.3■□□□□ 0.84
CDH11-210ENST00000564770 SPINK5Q9NQ38 1064 aaPredicted RBP20.3■□□□□ 0.84
CDH11-210ENST00000564770 OTOFQ9HC10 1997 aa20.3■□□□□ 0.84
CDH11-210ENST00000564770 FOXO4P98177 505 aa20.29■□□□□ 0.84
CDH11-210ENST00000564770 TTLL5Q6EMB2 1281 aa20.29■□□□□ 0.84
CDH11-210ENST00000564770 TAF5LO75529 589 aa20.28■□□□□ 0.84
CDH11-210ENST00000564770 CERS5Q8N5B7 392 aa20.28■□□□□ 0.84
CDH11-210ENST00000564770 CD209Q9NNX6 404 aa20.28■□□□□ 0.84
CDH11-210ENST00000564770 COL1A1P02452 1464 aaPredicted RBP20.28■□□□□ 0.84
CDH11-210ENST00000564770 KCNJ4P48050 445 aa20.27■□□□□ 0.84
CDH11-210ENST00000564770 BEND3Q5T5X7 828 aa20.27■□□□□ 0.84
CDH11-210ENST00000564770 HELBQ8NG08 1087 aaPredicted RBP20.27■□□□□ 0.84
CDH11-210ENST00000564770 PCDHAC2Q9Y5I4 1007 aa20.27■□□□□ 0.84
CDH11-210ENST00000564770 ANKRD18BA2A2Z9 1011 aa20.26■□□□□ 0.83
CDH11-210ENST00000564770 TTLL12Q14166 644 aaPredicted RBP20.26■□□□□ 0.83
CDH11-210ENST00000564770 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
CDH11-210ENST00000564770 WDR63Q8IWG1 891 aa20.26■□□□□ 0.83
CDH11-210ENST00000564770 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
CDH11-210ENST00000564770 FZD1Q9UP38 647 aa20.26■□□□□ 0.83
CDH11-210ENST00000564770 PDE4DIPQ5VU43 2346 aa20.26■□□□□ 0.83
CDH11-210ENST00000564770 BRCA2P51587 3418 aa20.25■□□□□ 0.83
CDH11-210ENST00000564770 MKRN3Q13064 507 aaKnown RBP20.25■□□□□ 0.83
CDH11-210ENST00000564770 APOBEC3FQ8IUX4 373 aaKnown RBP20.25■□□□□ 0.83
CDH11-210ENST00000564770 AOX1Q06278 1338 aa20.25■□□□□ 0.83
CDH11-210ENST00000564770 MMP14P50281 582 aa20.24■□□□□ 0.83
CDH11-210ENST00000564770 SOX10P56693 466 aa20.24■□□□□ 0.83
CDH11-210ENST00000564770 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
CDH11-210ENST00000564770 PRKG1Q13976 671 aa20.24■□□□□ 0.83
CDH11-210ENST00000564770 C15orf52Q6ZUT6 534 aaKnown RBP20.24■□□□□ 0.83
CDH11-210ENST00000564770 CTU1Q7Z7A3 348 aaKnown RBP20.24■□□□□ 0.83
CDH11-210ENST00000564770 HDAC9Q9UKV0 1011 aa20.24■□□□□ 0.83
CDH11-210ENST00000564770 CHMP3Q9Y3E7 222 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms