RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SCARF1Q14162 830 aa23.58■■□□□ 1.37
CLN6-204ENST00000564752 SULF1Q8IWU6 871 aa23.58■■□□□ 1.37
CLN6-204ENST00000564752 C2orf69Q8N8R5 385 aa23.58■■□□□ 1.37
CLN6-204ENST00000564752 ABHD8Q96I13 439 aa23.58■■□□□ 1.37
CLN6-204ENST00000564752 CA12O43570 354 aa23.57■■□□□ 1.36
CLN6-204ENST00000564752 ITGA6P23229 1130 aa23.57■■□□□ 1.36
CLN6-204ENST00000564752 NOGQ13253 232 aa23.57■■□□□ 1.36
CLN6-204ENST00000564752 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
CLN6-204ENST00000564752 LEMD3Q9Y2U8 911 aa23.57■■□□□ 1.36
CLN6-204ENST00000564752 RGMBQ6NW40 437 aa23.56■■□□□ 1.36
CLN6-204ENST00000564752 ZIC5Q96T25 663 aa23.56■■□□□ 1.36
CLN6-204ENST00000564752 MYOZ2Q9NPC6 264 aa23.56■■□□□ 1.36
CLN6-204ENST00000564752 TSKSQ9UJT2 592 aa23.56■■□□□ 1.36
CLN6-204ENST00000564752 FAM161AQ3B820 660 aa23.55■■□□□ 1.36
CLN6-204ENST00000564752 ANGEL2Q5VTE6 544 aaKnown RBP23.55■■□□□ 1.36
CLN6-204ENST00000564752 TXNRD3Q86VQ6 643 aa23.55■■□□□ 1.36
CLN6-204ENST00000564752 COA1Q9GZY4 146 aa23.55■■□□□ 1.36
CLN6-204ENST00000564752 DACT2Q5SW24 774 aa23.54■■□□□ 1.36
CLN6-204ENST00000564752 MPHOSPH8Q99549 860 aa23.54■■□□□ 1.36
CLN6-204ENST00000564752 ANKRD2Q9GZV1 360 aa23.54■■□□□ 1.36
CLN6-204ENST00000564752 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
CLN6-204ENST00000564752 STRIP1Q5VSL9 837 aa23.53■■□□□ 1.36
CLN6-204ENST00000564752 CCDC102AQ96A19 550 aa23.53■■□□□ 1.36
CLN6-204ENST00000564752 CDCA5Q96FF9 252 aa23.53■■□□□ 1.36
CLN6-204ENST00000564752 ZNF804BA4D1E1 1349 aa23.53■■□□□ 1.36
CLN6-204ENST00000564752 POLR2AP24928 1970 aaKnown RBP23.52■■□□□ 1.36
CLN6-204ENST00000564752 BEND3Q5T5X7 828 aa23.52■■□□□ 1.36
CLN6-204ENST00000564752 MXD3Q9BW11 206 aa23.52■■□□□ 1.36
CLN6-204ENST00000564752 F6X3S4 739 aa23.51■■□□□ 1.35
CLN6-204ENST00000564752 ZNF157P51786 506 aaPredicted RBP23.51■■□□□ 1.35
CLN6-204ENST00000564752 PITPNM2Q9BZ72 1349 aa23.51■■□□□ 1.35
CLN6-204ENST00000564752 ANKRD18BA2A2Z9 1011 aa23.5■■□□□ 1.35
CLN6-204ENST00000564752 FOXO4P98177 505 aa23.5■■□□□ 1.35
CLN6-204ENST00000564752 CHRNDQ07001 517 aa23.5■■□□□ 1.35
CLN6-204ENST00000564752 MYH3P11055 1940 aa23.5■■□□□ 1.35
CLN6-204ENST00000564752 MYO3BQ8WXR4 1341 aa23.5■■□□□ 1.35
CLN6-204ENST00000564752 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
CLN6-204ENST00000564752 CASP8AP2Q9UKL3 1982 aa23.49■■□□□ 1.35
CLN6-204ENST00000564752 CCDC85CA6NKD9 419 aa23.49■■□□□ 1.35
CLN6-204ENST00000564752 KLRK1P26718 216 aa23.49■■□□□ 1.35
CLN6-204ENST00000564752 NBPF9Q3BBW0 867 aa23.49■■□□□ 1.35
CLN6-204ENST00000564752 OGFOD1Q8N543 542 aa23.49■■□□□ 1.35
CLN6-204ENST00000564752 FBXW7Q969H0 707 aa23.49■■□□□ 1.35
CLN6-204ENST00000564752 MMP14P50281 582 aa23.48■■□□□ 1.35
CLN6-204ENST00000564752 TTLL5Q6EMB2 1281 aa23.48■■□□□ 1.35
CLN6-204ENST00000564752 PSME4Q14997 1843 aa23.47■■□□□ 1.35
CLN6-204ENST00000564752 FKBP1BP68106 108 aa23.47■■□□□ 1.35
CLN6-204ENST00000564752 KIF23Q02241 960 aaPredicted RBP23.47■■□□□ 1.35
CLN6-204ENST00000564752 IFIT5Q13325 482 aaKnown RBP23.47■■□□□ 1.35
CLN6-204ENST00000564752 CCER2I3L3R5 266 aa23.46■■□□□ 1.35
CLN6-204ENST00000564752 WNT10BO00744 389 aa23.46■■□□□ 1.35
CLN6-204ENST00000564752 SLC10A3P09131 477 aa23.46■■□□□ 1.35
CLN6-204ENST00000564752 KCNJ4P48050 445 aa23.46■■□□□ 1.35
CLN6-204ENST00000564752 SCAF8Q9UPN6 1271 aaKnown RBP23.46■■□□□ 1.35
CLN6-204ENST00000564752 IRS2Q9Y4H2 1338 aa23.45■■□□□ 1.34
CLN6-204ENST00000564752 SNAP23O00161 211 aa23.45■■□□□ 1.34
CLN6-204ENST00000564752 C15orf52Q6ZUT6 534 aaKnown RBP23.45■■□□□ 1.34
CLN6-204ENST00000564752 CD209Q9NNX6 404 aa23.45■■□□□ 1.34
CLN6-204ENST00000564752 TAF5LO75529 589 aa23.44■■□□□ 1.34
CLN6-204ENST00000564752 GTF2IP78347 998 aa23.44■■□□□ 1.34
CLN6-204ENST00000564752 EPHA10Q5JZY3 1008 aa23.44■■□□□ 1.34
CLN6-204ENST00000564752 LMBR1LQ6UX01 489 aa23.44■■□□□ 1.34
CLN6-204ENST00000564752 HELBQ8NG08 1087 aaPredicted RBP23.44■■□□□ 1.34
CLN6-204ENST00000564752 SAGE1Q9NXZ1 904 aa23.44■■□□□ 1.34
CLN6-204ENST00000564752 CHMP3Q9Y3E7 222 aa23.44■■□□□ 1.34
CLN6-204ENST00000564752 SPEF2Q9C093 1822 aa23.43■■□□□ 1.34
CLN6-204ENST00000564752 GRM8O00222 908 aa23.43■■□□□ 1.34
CLN6-204ENST00000564752 PRAMEF18Q5VWM3 479 aa23.43■■□□□ 1.34
CLN6-204ENST00000564752 CSRNP1Q96S65 589 aa23.43■■□□□ 1.34
CLN6-204ENST00000564752 ALDH1L1O75891 902 aa23.42■■□□□ 1.34
CLN6-204ENST00000564752 KIAA0825Q8IV33 1275 aa23.42■■□□□ 1.34
CLN6-204ENST00000564752 E9PSI1 815 aa23.41■■□□□ 1.34
CLN6-204ENST00000564752 CCDC57Q2TAC2 916 aa23.41■■□□□ 1.34
CLN6-204ENST00000564752 MOB2Q70IA6 237 aa23.41■■□□□ 1.34
CLN6-204ENST00000564752 RASAL3Q86YV0 1011 aa23.41■■□□□ 1.34
CLN6-204ENST00000564752 ZBED3Q96IU2 234 aaPredicted RBP23.41■■□□□ 1.34
CLN6-204ENST00000564752 RNF186Q9NXI6 227 aa23.41■■□□□ 1.34
CLN6-204ENST00000564752 C9orf78Q9NZ63 289 aaPredicted RBP23.41■■□□□ 1.34
CLN6-204ENST00000564752 HDAC9Q9UKV0 1011 aa23.41■■□□□ 1.34
CLN6-204ENST00000564752 SASH1O94885 1247 aa23.4■■□□□ 1.34
CLN6-204ENST00000564752 SLC4A10Q6U841 1118 aa23.4■■□□□ 1.34
CLN6-204ENST00000564752 REM2Q8IYK8 340 aaPredicted RBP23.4■■□□□ 1.34
CLN6-204ENST00000564752 ZNF594Q96JF6 807 aaPredicted RBP23.4■■□□□ 1.34
CLN6-204ENST00000564752 SRCIN1Q9C0H9 1055 aa23.4■■□□□ 1.34
CLN6-204ENST00000564752 MCOLN1Q9GZU1 580 aa23.4■■□□□ 1.34
CLN6-204ENST00000564752 UBE2Q2LH0YL09 131 aa23.39■■□□□ 1.33
CLN6-204ENST00000564752 TRPA1O75762 1119 aa23.39■■□□□ 1.33
CLN6-204ENST00000564752 IL1R1P14778 569 aa23.39■■□□□ 1.33
CLN6-204ENST00000564752 MLLT1Q03111 559 aaPredicted RBP23.39■■□□□ 1.33
CLN6-204ENST00000564752 LDHAL6AQ6ZMR3 332 aa23.39■■□□□ 1.33
CLN6-204ENST00000564752 ZNF804AQ7Z570 1209 aa23.38■■□□□ 1.33
CLN6-204ENST00000564752 CERS5Q8N5B7 392 aa23.38■■□□□ 1.33
CLN6-204ENST00000564752 ZNF646O15015 1829 aaPredicted RBP23.38■■□□□ 1.33
CLN6-204ENST00000564752 TAF7LQ5H9L4 462 aa23.37■■□□□ 1.33
CLN6-204ENST00000564752 PLIN1O60240 522 aa23.36■■□□□ 1.33
CLN6-204ENST00000564752 NF2P35240 595 aa23.36■■□□□ 1.33
CLN6-204ENST00000564752 DGKZQ13574 1117 aa23.36■■□□□ 1.33
CLN6-204ENST00000564752 APOBEC3FQ8IUX4 373 aaKnown RBP23.36■■□□□ 1.33
CLN6-204ENST00000564752 KAZALD1Q96I82 304 aa23.36■■□□□ 1.33
CLN6-204ENST00000564752 CNNM1Q9NRU3 951 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms