RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CNTN3Q9P232 1028 aa8.68□□□□□ -1.02
CHD9-212ENST00000564641 Q6ZS46 218 aa8.67□□□□□ -1.02
CHD9-212ENST00000564641 MEGF10Q96KG7 1140 aa8.67□□□□□ -1.02
CHD9-212ENST00000564641 GGNBP2Q9H3C7 697 aa8.67□□□□□ -1.02
CHD9-212ENST00000564641 PHLDB3Q6NSJ2 640 aa8.66□□□□□ -1.02
CHD9-212ENST00000564641 PRR23CQ6ZRP0 262 aa8.66□□□□□ -1.02
CHD9-212ENST00000564641 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.66□□□□□ -1.02
CHD9-212ENST00000564641 C1orf127Q8N9H9 656 aa8.66□□□□□ -1.02
CHD9-212ENST00000564641 POP1Q99575 1024 aaKnown RBP8.66□□□□□ -1.02
CHD9-212ENST00000564641 CEP41Q9BYV8 373 aa8.66□□□□□ -1.02
CHD9-212ENST00000564641 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
CHD9-212ENST00000564641 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
CHD9-212ENST00000564641 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
CHD9-212ENST00000564641 FSCN2O14926 492 aa8.65□□□□□ -1.02
CHD9-212ENST00000564641 GALNT11Q8NCW6 608 aa8.65□□□□□ -1.02
CHD9-212ENST00000564641 SNX29Q8TEQ0 813 aa8.65□□□□□ -1.02
CHD9-212ENST00000564641 DZANK1Q9NVP4 752 aa8.65□□□□□ -1.02
CHD9-212ENST00000564641 H3BRJ5 948 aa8.64□□□□□ -1.03
CHD9-212ENST00000564641 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
CHD9-212ENST00000564641 EDN3P14138 238 aa8.64□□□□□ -1.03
CHD9-212ENST00000564641 PIP4K2BP78356 416 aa8.64□□□□□ -1.03
CHD9-212ENST00000564641 MTMR3Q13615 1198 aa8.64□□□□□ -1.03
CHD9-212ENST00000564641 OSGEPQ9NPF4 335 aa8.64□□□□□ -1.03
CHD9-212ENST00000564641 SEC31BQ9NQW1 1179 aa8.64□□□□□ -1.03
CHD9-212ENST00000564641 EGFL7Q9UHF1 273 aa8.64□□□□□ -1.03
CHD9-212ENST00000564641 PHACTR2O75167 634 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 TNFRSF21O75509 655 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 ALX3O95076 343 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 ABL1P00519 1130 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 GLB1P16278 677 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 EPHA1P21709 976 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 PDE4CQ08493 712 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 UVSSAQ2YD98 709 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 ARTNQ5T4W7 220 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 TMEM102Q8N9M5 508 aaPredicted RBP8.63□□□□□ -1.03
CHD9-212ENST00000564641 CHRDQ9H2X0 955 aa8.63□□□□□ -1.03
CHD9-212ENST00000564641 NFKBIEO00221 500 aa8.62□□□□□ -1.03
CHD9-212ENST00000564641 EIF4EBP3O60516 100 aaPredicted RBP8.62□□□□□ -1.03
CHD9-212ENST00000564641 ARL4DP49703 201 aa8.62□□□□□ -1.03
CHD9-212ENST00000564641 TXNDC11Q6PKC3 985 aa8.62□□□□□ -1.03
CHD9-212ENST00000564641 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
CHD9-212ENST00000564641 SH2B1Q9NRF2 756 aaPredicted RBP8.62□□□□□ -1.03
CHD9-212ENST00000564641 A6NHS1 94 aa8.61□□□□□ -1.03
CHD9-212ENST00000564641 DUOXA2Q1HG44 320 aa8.61□□□□□ -1.03
CHD9-212ENST00000564641 FOXD4L6Q3SYB3 417 aaPredicted RBP8.61□□□□□ -1.03
CHD9-212ENST00000564641 FOXD4L3Q6VB84 417 aaPredicted RBP8.61□□□□□ -1.03
CHD9-212ENST00000564641 ACAD11Q709F0 780 aa8.61□□□□□ -1.03
CHD9-212ENST00000564641 GJD3Q8N144 294 aa8.61□□□□□ -1.03
CHD9-212ENST00000564641 TM4SF5O14894 197 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 GSC2O15499 205 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 FZD6O60353 706 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 CDC25BP30305 580 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 LRP8Q14114 963 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 AGGF1Q8N302 714 aaeCLIP8.6□□□□□ -1.03
CHD9-212ENST00000564641 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 OSMRQ99650 979 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 RNF112Q9ULX5 631 aa8.6□□□□□ -1.03
CHD9-212ENST00000564641 DHX15O43143 795 aaKnown RBP8.59□□□□□ -1.03
CHD9-212ENST00000564641 AMOTL2Q9Y2J4 779 aa8.59□□□□□ -1.03
CHD9-212ENST00000564641 EREGO14944 169 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 ICMTO60725 284 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 NEFLP07196 543 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 ADAMTSL4Q6UY14 1074 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 NXPE3Q969Y0 559 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 KLHDC7BQ96G42 594 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 KCNK4Q9NYG8 393 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 SOX13Q9UN79 622 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 RAXQ9Y2V3 346 aa8.58□□□□□ -1.04
CHD9-212ENST00000564641 WISP1O95388 367 aa8.57□□□□□ -1.04
CHD9-212ENST00000564641 FSTP19883 344 aa8.57□□□□□ -1.04
CHD9-212ENST00000564641 C19orf57Q0VDD7 668 aa8.57□□□□□ -1.04
CHD9-212ENST00000564641 ZNF211Q13398 564 aaPredicted RBP8.57□□□□□ -1.04
CHD9-212ENST00000564641 KIAA1211Q6ZU35 1233 aa8.57□□□□□ -1.04
CHD9-212ENST00000564641 UBL7Q96S82 380 aaPredicted RBP8.57□□□□□ -1.04
CHD9-212ENST00000564641 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
CHD9-212ENST00000564641 RNF208Q9H0X6 261 aa8.57□□□□□ -1.04
CHD9-212ENST00000564641 STOML1Q9UBI4 398 aa8.57□□□□□ -1.04
CHD9-212ENST00000564641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.57□□□□□ -1.04
CHD9-212ENST00000564641 CARNS1A5YM72 827 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 ACPPP15309 386 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 IKBKEQ14164 716 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 ANKRD34AQ69YU3 496 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 NBPF11Q86T75 865 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 GLYCTKQ8IVS8 523 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 FOXD4L4Q8WXT5 416 aaPredicted RBP8.56□□□□□ -1.04
CHD9-212ENST00000564641 BHLHE41Q9C0J9 482 aaPredicted RBP8.56□□□□□ -1.04
CHD9-212ENST00000564641 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
CHD9-212ENST00000564641 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 CCDC87Q9NVE4 849 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 BRPF3Q9ULD4 1205 aa8.56□□□□□ -1.04
CHD9-212ENST00000564641 SLC7A3Q8WY07 619 aa8.55□□□□□ -1.04
CHD9-212ENST00000564641 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
CHD9-212ENST00000564641 FAM46AQ96IP4 442 aaKnown RBP8.55□□□□□ -1.04
CHD9-212ENST00000564641 ANO2Q9NQ90 1003 aa8.55□□□□□ -1.04
CHD9-212ENST00000564641 FOXD3Q9UJU5 478 aaPredicted RBP8.55□□□□□ -1.04
CHD9-212ENST00000564641 SART1O43290 800 aaKnown RBP8.54□□□□□ -1.04
CHD9-212ENST00000564641 ADAM11O75078 769 aa8.54□□□□□ -1.04
CHD9-212ENST00000564641 PDE3BQ13370 1112 aa8.54□□□□□ -1.04
CHD9-212ENST00000564641 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms