RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SRCIN1Q9C0H9 1055 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 EHD4Q9H223 541 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 SUV39H2Q9H5I1 410 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
LINC00560-201ENST00000564593 OIP5O43482 229 aa7.64□□□□□ -1.19
LINC00560-201ENST00000564593 HOXD8P13378 290 aaPredicted RBP7.64□□□□□ -1.19
LINC00560-201ENST00000564593 PCBP4P57723 403 aaKnown RBP7.64□□□□□ -1.19
LINC00560-201ENST00000564593 MLLT1Q03111 559 aaPredicted RBP7.64□□□□□ -1.19
LINC00560-201ENST00000564593 GRM2Q14416 872 aa7.64□□□□□ -1.19
LINC00560-201ENST00000564593 TRPM4Q8TD43 1214 aa7.64□□□□□ -1.19
LINC00560-201ENST00000564593 CRELD1Q96HD1 420 aa7.64□□□□□ -1.19
LINC00560-201ENST00000564593 FAM8A1Q9UBU6 413 aa7.64□□□□□ -1.19
LINC00560-201ENST00000564593 LOC102724428A0A0B4J2F2 783 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 CTSHP09668 335 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 SIK1P57059 783 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 PCSK7Q16549 785 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 HFE2Q6ZVN8 426 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 CEP120Q8N960 986 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 OSMRQ99650 979 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 DNAJB12Q9NXW2 375 aaKnown RBP7.63□□□□□ -1.19
LINC00560-201ENST00000564593 NSFL1CQ9UNZ2 370 aaKnown RBP7.63□□□□□ -1.19
LINC00560-201ENST00000564593 TRAK1Q9UPV9 953 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 ZBTB42B2RXF5 422 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 J3QW42 95 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 SIN3BO75182 1162 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 FURINP09958 794 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 USP17L7P0C7H9 530 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 GPLD1P80108 840 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 KRTAP1-3Q8IUG1 177 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 ZKSCAN3Q9BRR0 538 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 LIN7BQ9HAP6 207 aa7.63□□□□□ -1.19
LINC00560-201ENST00000564593 AVENQ9NQS1 362 aaPredicted RBP7.63□□□□□ -1.19
LINC00560-201ENST00000564593 ACPPP15309 386 aa7.62□□□□□ -1.19
LINC00560-201ENST00000564593 TRPA1O75762 1119 aa7.61□□□□□ -1.19
LINC00560-201ENST00000564593 GHRHP01286 108 aa7.61□□□□□ -1.19
LINC00560-201ENST00000564593 ADH6P28332 368 aa7.61□□□□□ -1.19
LINC00560-201ENST00000564593 MAP2K3P46734 347 aa7.61□□□□□ -1.19
LINC00560-201ENST00000564593 SNRPNP63162 240 aaKnown RBP7.61□□□□□ -1.19
LINC00560-201ENST00000564593 GLIS3Q8NEA6 775 aa7.61□□□□□ -1.19
LINC00560-201ENST00000564593 RBSNQ9H1K0 784 aa7.61□□□□□ -1.19
LINC00560-201ENST00000564593 DZANK1Q9NVP4 752 aa7.61□□□□□ -1.19
LINC00560-201ENST00000564593 ARAFP10398 606 aa7.6□□□□□ -1.19
LINC00560-201ENST00000564593 GSTT1P30711 240 aa7.6□□□□□ -1.19
LINC00560-201ENST00000564593 HDLBPQ00341 1268 aaKnown RBP7.6□□□□□ -1.19
LINC00560-201ENST00000564593 TNFRSF25Q93038 417 aa7.6□□□□□ -1.19
LINC00560-201ENST00000564593 TCF12Q99081 682 aa7.6□□□□□ -1.19
LINC00560-201ENST00000564593 METTL5Q9NRN9 209 aaKnown RBP7.6□□□□□ -1.19
LINC00560-201ENST00000564593 KLF15Q9UIH9 416 aa7.6□□□□□ -1.19
LINC00560-201ENST00000564593 MKL2Q9ULH7 1088 aa7.6□□□□□ -1.19
LINC00560-201ENST00000564593 CPB1P15086 417 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 EIF2AK2P19525 551 aaKnown RBP7.59□□□□□ -1.19
LINC00560-201ENST00000564593 ZNF76P36508 570 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 FCGRTP55899 365 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 FANCCQ00597 558 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 TAF1CQ15572 869 aaPredicted RBP7.59□□□□□ -1.19
LINC00560-201ENST00000564593 C9orf131Q5VYM1 1079 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 CCNJLQ8IV13 435 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 RNF34Q969K3 372 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 OXCT2Q9BYC2 517 aaPredicted RBP7.59□□□□□ -1.19
LINC00560-201ENST00000564593 SLC6A14Q9UN76 642 aa7.59□□□□□ -1.19
LINC00560-201ENST00000564593 TMEM238LA0A1B0GVL6 79 aa7.59□□□□□ -1.2
LINC00560-201ENST00000564593 NEURL1BA8MQ27 555 aa7.59□□□□□ -1.2
LINC00560-201ENST00000564593 COL8A1P27658 744 aa7.59□□□□□ -1.2
LINC00560-201ENST00000564593 MEI1Q5TIA1 1274 aa7.59□□□□□ -1.2
LINC00560-201ENST00000564593 PRPF40BQ6NWY9 871 aaKnown RBP7.59□□□□□ -1.2
LINC00560-201ENST00000564593 PBX4Q9BYU1 374 aa7.59□□□□□ -1.2
LINC00560-201ENST00000564593 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.2
LINC00560-201ENST00000564593 USP31Q70CQ4 1352 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 ADARB2-AS1A8MUL3 147 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 NFKBIEO00221 500 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 PDE2AO00408 941 aaPredicted RBP7.58□□□□□ -1.2
LINC00560-201ENST00000564593 ADH7P40394 386 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 ATP11AP98196 1134 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 DTHD1Q6ZMT9 781 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 MICALL1Q8N3F8 863 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 TMEM102Q8N9M5 508 aaPredicted RBP7.58□□□□□ -1.2
LINC00560-201ENST00000564593 HHIPQ96QV1 700 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 ABCB6Q9NP58 842 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 GGA1Q9UJY5 639 aa7.58□□□□□ -1.2
LINC00560-201ENST00000564593 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
LINC00560-201ENST00000564593 ERCC5P28715 1186 aaPredicted RBP7.57□□□□□ -1.2
LINC00560-201ENST00000564593 ELMSAN1Q6PJG2 1045 aa7.57□□□□□ -1.2
LINC00560-201ENST00000564593 FCHSD1Q86WN1 690 aa7.57□□□□□ -1.2
LINC00560-201ENST00000564593 ASAP3Q8TDY4 903 aa7.57□□□□□ -1.2
LINC00560-201ENST00000564593 NXPE3Q969Y0 559 aa7.57□□□□□ -1.2
LINC00560-201ENST00000564593 AKAP2Q9Y2D5 859 aa7.57□□□□□ -1.2
LINC00560-201ENST00000564593 METTL12A8MUP2 240 aa7.56□□□□□ -1.2
LINC00560-201ENST00000564593 SHISA8B8ZZ34 492 aa7.56□□□□□ -1.2
LINC00560-201ENST00000564593 SMNDC1O75940 238 aaKnown RBP eCLIP7.56□□□□□ -1.2
LINC00560-201ENST00000564593 GRIA4P48058 902 aa7.56□□□□□ -1.2
LINC00560-201ENST00000564593 PERM1Q5SV97 790 aa7.56□□□□□ -1.2
LINC00560-201ENST00000564593 CEP135Q66GS9 1140 aa7.56□□□□□ -1.2
LINC00560-201ENST00000564593 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
LINC00560-201ENST00000564593 C3orf58Q8NDZ4 430 aa7.56□□□□□ -1.2
LINC00560-201ENST00000564593 PLD4Q96BZ4 506 aa7.56□□□□□ -1.2
LINC00560-201ENST00000564593 BHLHE41Q9C0J9 482 aaPredicted RBP7.56□□□□□ -1.2
LINC00560-201ENST00000564593 TTF2Q9UNY4 1162 aaKnown RBP7.56□□□□□ -1.2
LINC00560-201ENST00000564593 ELOA3CA0A087WX78 387 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms