RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SMC1AQ14683 1233 aaKnown RBP14.46□□□□□ -0.09
COMMD4-209ENST00000564068 TM6SF1Q9BZW5 370 aa14.46□□□□□ -0.09
COMMD4-209ENST00000564068 CEP131Q9UPN4 1083 aa14.46□□□□□ -0.09
COMMD4-209ENST00000564068 NCOA7Q8NI08 942 aa14.46□□□□□ -0.1
COMMD4-209ENST00000564068 USP28Q96RU2 1077 aa14.46□□□□□ -0.1
COMMD4-209ENST00000564068 LSG1Q9H089 658 aaKnown RBP14.46□□□□□ -0.1
COMMD4-209ENST00000564068 ZSWIM6Q9HCJ5 1215 aa14.46□□□□□ -0.1
COMMD4-209ENST00000564068 ADCY10Q96PN6 1610 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 TTC31Q49AM3 519 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-209ENST00000564068 DNAJC21Q5F1R6 531 aaKnown RBP14.45□□□□□ -0.1
COMMD4-209ENST00000564068 FBXO38Q6PIJ6 1188 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 COPS6Q7L5N1 327 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 AOX1Q06278 1338 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 MAP3K19Q56UN5 1328 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 CTAGE9A4FU28 777 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 ALDH1L1O75891 902 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 ETF1P62495 437 aaKnown RBP14.45□□□□□ -0.1
COMMD4-209ENST00000564068 SLC39A6Q13433 755 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 METTL24Q5JXM2 366 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 BICC1Q9H694 974 aaKnown RBP14.45□□□□□ -0.1
COMMD4-209ENST00000564068 ZBTB22O15209 634 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 WDHD1O75717 1129 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-209ENST00000564068 SSRP1Q08945 709 aaKnown RBP14.45□□□□□ -0.1
COMMD4-209ENST00000564068 SPA17Q15506 151 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 LINS1Q8NG48 757 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 NAPBQ9H115 298 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 RABEP2Q9H5N1 569 aa14.45□□□□□ -0.1
COMMD4-209ENST00000564068 KIF24Q5T7B8 1368 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 TDRD7Q8NHU6 1098 aaKnown RBP14.44□□□□□ -0.1
COMMD4-209ENST00000564068 SSH3Q8TE77 659 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 SYNMO15061 1565 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 SBNO2Q9Y2G9 1366 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 MINDY4BA8MYZ0 360 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 PRC1O43663 620 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 ZNF202O95125 648 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 TERF2Q15554 542 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 CEP112Q8N8E3 955 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 XAGE3Q8WTP9 111 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 MRFAP1L1Q96HT8 127 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 ENOX2Q16206 610 aaKnown RBP14.44□□□□□ -0.1
COMMD4-209ENST00000564068 TMEM67Q5HYA8 995 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 C11orf57Q6ZUT1 292 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-209ENST00000564068 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
COMMD4-209ENST00000564068 MCM3P25205 808 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 ANKRD13DQ6ZTN6 518 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 CAPZA3Q96KX2 299 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.43□□□□□ -0.1
COMMD4-209ENST00000564068 GUCA1BQ9UMX6 200 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 CDC42BPAQ5VT25 1732 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 SEC31AO94979 1220 aaKnown RBP14.43□□□□□ -0.1
COMMD4-209ENST00000564068 TFCP2Q12800 502 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 CERS3Q8IU89 383 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 DRC1Q96MC2 740 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 PLCD4Q9BRC7 762 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 FTOQ9C0B1 505 aaKnown RBP eCLIP14.43□□□□□ -0.1
COMMD4-209ENST00000564068 IMPACTQ9P2X3 320 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 A0A0D9SFI3 127 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 PTPN21Q16825 1174 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 KCNH5Q8NCM2 988 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 ZBTB3Q9H5J0 574 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 SPTLC3Q9NUV7 552 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 STAP2Q9UGK3 403 aa14.43□□□□□ -0.1
COMMD4-209ENST00000564068 DDX41Q9UJV9 622 aaKnown RBP14.43□□□□□ -0.1
COMMD4-209ENST00000564068 ZNF853P0CG23 659 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 CHMP4BP1P59074 171 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 SPECC1Q5M775 1068 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 HDXQ7Z353 690 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 SSH2Q76I76 1423 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 PAFAH1B1P43034 410 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 LRRIQ1Q96JM4 1722 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 KDM5AP29375 1690 aaKnown RBP14.42□□□□□ -0.1
COMMD4-209ENST00000564068 MTX1Q13505 466 aa14.42□□□□□ -0.1
COMMD4-209ENST00000564068 LTKP29376 864 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 NBPF11Q86T75 865 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 CDK5RAP3Q96JB5 506 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 ABCF2Q9UG63 623 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 PREX2Q70Z35 1606 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 ABCC1P33527 1531 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 AMOTQ4VCS5 1084 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 TAX1BP1Q86VP1 789 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 DHX58Q96C10 678 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 PAG1Q9NWQ8 432 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 KIAA1468Q9P260 1216 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 BCCIPQ9P287 314 aaKnown RBP eCLIP14.41□□□□□ -0.1
COMMD4-209ENST00000564068 TIMM10P62072 90 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 DESI2Q9BSY9 194 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 LRP2BPQ9P2M1 347 aa14.41□□□□□ -0.1
COMMD4-209ENST00000564068 EBAG9O00559 213 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 ZBTB43O43298 467 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 ADKP55263 362 aaKnown RBP14.4□□□□□ -0.1
COMMD4-209ENST00000564068 ZNF710Q8N1W2 664 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 DBNDD2Q9BQY9 259 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 ARHGAP6O43182 974 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 ANO1Q5XXA6 986 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 EAF2Q96CJ1 260 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-209ENST00000564068 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 AKAP2Q9Y2D5 859 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 FAM135BQ49AJ0 1406 aa14.4□□□□□ -0.1
COMMD4-209ENST00000564068 ATP2C2O75185 946 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms