RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 WTIPA6NIX2 430 aaPredicted RBP24.87■■□□□ 1.57
CMTM3-207ENST00000564060 BCAR3O75815 825 aa24.87■■□□□ 1.57
CMTM3-207ENST00000564060 ITGBL1O95965 494 aaPredicted RBP24.87■■□□□ 1.57
CMTM3-207ENST00000564060 TRIM27P14373 513 aa24.87■■□□□ 1.57
CMTM3-207ENST00000564060 HELBQ8NG08 1087 aaPredicted RBP24.87■■□□□ 1.57
CMTM3-207ENST00000564060 CREBZFQ9NS37 354 aa24.87■■□□□ 1.57
CMTM3-207ENST00000564060 MYO3BQ8WXR4 1341 aa24.86■■□□□ 1.57
CMTM3-207ENST00000564060 CEP350Q5VT06 3117 aa24.86■■□□□ 1.57
CMTM3-207ENST00000564060 ZKSCAN2Q63HK3 967 aa24.86■■□□□ 1.57
CMTM3-207ENST00000564060 ZNF804AQ7Z570 1209 aa24.86■■□□□ 1.57
CMTM3-207ENST00000564060 PLIN1O60240 522 aa24.85■■□□□ 1.57
CMTM3-207ENST00000564060 GNAI3P08754 354 aa24.85■■□□□ 1.57
CMTM3-207ENST00000564060 UBE4AQ14139 1066 aa24.85■■□□□ 1.57
CMTM3-207ENST00000564060 STRIP1Q5VSL9 837 aa24.85■■□□□ 1.57
CMTM3-207ENST00000564060 TXNRD3Q86VQ6 643 aa24.85■■□□□ 1.57
CMTM3-207ENST00000564060 POLR2AP24928 1970 aaKnown RBP24.84■■□□□ 1.57
CMTM3-207ENST00000564060 TRPM4Q8TD43 1214 aa24.84■■□□□ 1.57
CMTM3-207ENST00000564060 RIPOR2Q9Y4F9 1068 aa24.84■■□□□ 1.57
CMTM3-207ENST00000564060 KLRK1P26718 216 aa24.83■■□□□ 1.57
CMTM3-207ENST00000564060 HTRA3P83110 453 aa24.83■■□□□ 1.57
CMTM3-207ENST00000564060 DNAJC5GQ8N7S2 189 aa24.83■■□□□ 1.57
CMTM3-207ENST00000564060 FBXW7Q969H0 707 aa24.83■■□□□ 1.57
CMTM3-207ENST00000564060 KLRG1Q96E93 195 aa24.83■■□□□ 1.57
CMTM3-207ENST00000564060 PGAP2Q9UHJ9 254 aa24.83■■□□□ 1.57
CMTM3-207ENST00000564060 TMEM88BA6NKF7 163 aa24.82■■□□□ 1.56
CMTM3-207ENST00000564060 MMP14P50281 582 aa24.82■■□□□ 1.56
CMTM3-207ENST00000564060 MEIS3Q99687 375 aa24.82■■□□□ 1.56
CMTM3-207ENST00000564060 PUS3Q9BZE2 481 aaKnown RBP24.82■■□□□ 1.56
CMTM3-207ENST00000564060 CD209Q9NNX6 404 aa24.82■■□□□ 1.56
CMTM3-207ENST00000564060 IRS2Q9Y4H2 1338 aa24.82■■□□□ 1.56
CMTM3-207ENST00000564060 SHTN1A0MZ66 631 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 USP17L8P0C7I0 530 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 KIF4BQ2VIQ3 1234 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 TBC1D10BQ4KMP7 808 aaPredicted RBP24.81■■□□□ 1.56
CMTM3-207ENST00000564060 METTL24Q5JXM2 366 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 DACT2Q5SW24 774 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 TTLL5Q6EMB2 1281 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 SAMD7Q7Z3H4 446 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 FBXO3Q9UK99 471 aa24.81■■□□□ 1.56
CMTM3-207ENST00000564060 LRRFIP2Q9Y608 721 aaKnown RBP24.81■■□□□ 1.56
CMTM3-207ENST00000564060 SNAP23O00161 211 aa24.8■■□□□ 1.56
CMTM3-207ENST00000564060 HIRAP54198 1017 aaPredicted RBP24.8■■□□□ 1.56
CMTM3-207ENST00000564060 ZNF280AP59817 542 aaPredicted RBP24.8■■□□□ 1.56
CMTM3-207ENST00000564060 OGFOD1Q8N543 542 aa24.8■■□□□ 1.56
CMTM3-207ENST00000564060 GMLQ99445 158 aa24.8■■□□□ 1.56
CMTM3-207ENST00000564060 MYH13Q9UKX3 1938 aa24.79■■□□□ 1.56
CMTM3-207ENST00000564060 IL1R1P14778 569 aa24.79■■□□□ 1.56
CMTM3-207ENST00000564060 LRRC24Q50LG9 513 aa24.79■■□□□ 1.56
CMTM3-207ENST00000564060 CDC37L1Q7L3B6 337 aa24.79■■□□□ 1.56
CMTM3-207ENST00000564060 FTSJ3Q8IY81 847 aaKnown RBP24.79■■□□□ 1.56
CMTM3-207ENST00000564060 CLUAP1Q96AJ1 413 aa24.79■■□□□ 1.56
CMTM3-207ENST00000564060 ARAP2Q8WZ64 1704 aa24.78■■□□□ 1.56
CMTM3-207ENST00000564060 PDE8BO95263 885 aa24.78■■□□□ 1.56
CMTM3-207ENST00000564060 GTF2IP78347 998 aa24.78■■□□□ 1.56
CMTM3-207ENST00000564060 RBM26Q5T8P6 1007 aaKnown RBP24.78■■□□□ 1.56
CMTM3-207ENST00000564060 EYA2O00167 538 aa24.77■■□□□ 1.56
CMTM3-207ENST00000564060 RFX5P48382 616 aaPredicted RBP24.77■■□□□ 1.56
CMTM3-207ENST00000564060 PTPN12Q05209 780 aaKnown RBP24.77■■□□□ 1.56
CMTM3-207ENST00000564060 KLHDC4Q8TBB5 520 aa24.77■■□□□ 1.56
CMTM3-207ENST00000564060 DCPSQ96C86 337 aaKnown RBP24.77■■□□□ 1.56
CMTM3-207ENST00000564060 HDAC9Q9UKV0 1011 aa24.77■■□□□ 1.56
CMTM3-207ENST00000564060 MYOZ2Q9NPC6 264 aa24.76■■□□□ 1.55
CMTM3-207ENST00000564060 ECM29Q5VYK3 1845 aa24.75■■□□□ 1.55
CMTM3-207ENST00000564060 CIAO1O76071 339 aa24.75■■□□□ 1.55
CMTM3-207ENST00000564060 HIBADHP31937 336 aaKnown RBP24.75■■□□□ 1.55
CMTM3-207ENST00000564060 CAVIN4Q5BKX8 364 aa24.75■■□□□ 1.55
CMTM3-207ENST00000564060 VPS37DQ86XT2 251 aa24.75■■□□□ 1.55
CMTM3-207ENST00000564060 VGLL2Q8N8G2 317 aa24.75■■□□□ 1.55
CMTM3-207ENST00000564060 EGFRP00533 1210 aa24.74■■□□□ 1.55
CMTM3-207ENST00000564060 GNAI2P04899 355 aa24.74■■□□□ 1.55
CMTM3-207ENST00000564060 FKBP1AP62942 108 aaKnown RBP24.74■■□□□ 1.55
CMTM3-207ENST00000564060 PUM3Q15397 648 aaKnown RBP24.74■■□□□ 1.55
CMTM3-207ENST00000564060 DZIP1LQ8IYY4 767 aaKnown RBP24.74■■□□□ 1.55
CMTM3-207ENST00000564060 TMEM57Q8N5G2 664 aa24.74■■□□□ 1.55
CMTM3-207ENST00000564060 GLIS2Q9BZE0 524 aaPredicted RBP24.74■■□□□ 1.55
CMTM3-207ENST00000564060 TNNQ9UQP3 1299 aa24.74■■□□□ 1.55
CMTM3-207ENST00000564060 TRAF5O00463 557 aa24.73■■□□□ 1.55
CMTM3-207ENST00000564060 IFIT1P09914 478 aaKnown RBP24.73■■□□□ 1.55
CMTM3-207ENST00000564060 MTX1Q13505 466 aa24.73■■□□□ 1.55
CMTM3-207ENST00000564060 CNTNAP1P78357 1384 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 SASH1O94885 1247 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 MS4A1P11836 297 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 KRT26Q7Z3Y9 468 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 SULF1Q8IWU6 871 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 JMYQ8N9B5 988 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 FAM84BQ96KN1 310 aaPredicted RBP24.72■■□□□ 1.55
CMTM3-207ENST00000564060 MXD3Q9BW11 206 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 COPRSQ9NQ92 184 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 GGA3Q9NZ52 723 aa24.72■■□□□ 1.55
CMTM3-207ENST00000564060 ABT1Q9ULW3 272 aaKnown RBP24.72■■□□□ 1.55
CMTM3-207ENST00000564060 PITPNM2Q9BZ72 1349 aa24.71■■□□□ 1.55
CMTM3-207ENST00000564060 SRGAP3O43295 1099 aa24.71■■□□□ 1.55
CMTM3-207ENST00000564060 IL15P40933 162 aaPredicted RBP24.71■■□□□ 1.55
CMTM3-207ENST00000564060 GYG1P46976 350 aa24.71■■□□□ 1.55
CMTM3-207ENST00000564060 KIAA0825Q8IV33 1275 aa24.71■■□□□ 1.55
CMTM3-207ENST00000564060 TDRD7Q8NHU6 1098 aaKnown RBP24.71■■□□□ 1.55
CMTM3-207ENST00000564060 SIL1Q9H173 461 aa24.71■■□□□ 1.55
CMTM3-207ENST00000564060 FAM205AQ6ZU69 1335 aa24.7■■□□□ 1.54
CMTM3-207ENST00000564060 SLC5A1P13866 664 aa24.7■■□□□ 1.54
CMTM3-207ENST00000564060 SCARF1Q14162 830 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms