RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CHRNDQ07001 517 aa22.39■■□□□ 1.17
NME3-205ENST00000563854 TAF7LQ5H9L4 462 aa22.39■■□□□ 1.17
NME3-205ENST00000563854 EPHA10Q5JZY3 1008 aa22.39■■□□□ 1.17
NME3-205ENST00000563854 LMBR1LQ6UX01 489 aa22.39■■□□□ 1.17
NME3-205ENST00000563854 TNS4Q8IZW8 715 aa22.39■■□□□ 1.17
NME3-205ENST00000563854 AGBL3Q8NEM8 1001 aa22.39■■□□□ 1.17
NME3-205ENST00000563854 GGA3Q9NZ52 723 aa22.39■■□□□ 1.17
NME3-205ENST00000563854 ALDH1L1O75891 902 aa22.38■■□□□ 1.17
NME3-205ENST00000563854 ECE1P42892 770 aa22.38■■□□□ 1.17
NME3-205ENST00000563854 TXNRD3Q86VQ6 643 aa22.38■■□□□ 1.17
NME3-205ENST00000563854 HELBQ8NG08 1087 aaPredicted RBP22.38■■□□□ 1.17
NME3-205ENST00000563854 MXD3Q9BW11 206 aa22.38■■□□□ 1.17
NME3-205ENST00000563854 ASTN2O75129 1339 aaPredicted RBP22.37■■□□□ 1.17
NME3-205ENST00000563854 CCDC57Q2TAC2 916 aa22.37■■□□□ 1.17
NME3-205ENST00000563854 MRPL50Q8N5N7 158 aaKnown RBP22.37■■□□□ 1.17
NME3-205ENST00000563854 COA1Q9GZY4 146 aa22.37■■□□□ 1.17
NME3-205ENST00000563854 TAF5LO75529 589 aa22.36■■□□□ 1.17
NME3-205ENST00000563854 USP17L8P0C7I0 530 aa22.36■■□□□ 1.17
NME3-205ENST00000563854 SLFN5Q08AF3 891 aa22.36■■□□□ 1.17
NME3-205ENST00000563854 SAPCD2Q86UD0 394 aa22.36■■□□□ 1.17
NME3-205ENST00000563854 CDCA7LQ96GN5 454 aa22.36■■□□□ 1.17
NME3-205ENST00000563854 ZNF594Q96JF6 807 aaPredicted RBP22.36■■□□□ 1.17
NME3-205ENST00000563854 ZNF609O15014 1411 aa22.36■■□□□ 1.17
NME3-205ENST00000563854 SNAP23O00161 211 aa22.35■■□□□ 1.17
NME3-205ENST00000563854 ZNF280AP59817 542 aaPredicted RBP22.35■■□□□ 1.17
NME3-205ENST00000563854 SULF1Q8IWU6 871 aa22.35■■□□□ 1.17
NME3-205ENST00000563854 MYOZ2Q9NPC6 264 aa22.35■■□□□ 1.17
NME3-205ENST00000563854 WBP1LQ9NX94 342 aa22.35■■□□□ 1.17
NME3-205ENST00000563854 PLIN1O60240 522 aa22.34■■□□□ 1.17
NME3-205ENST00000563854 AOC2O75106 756 aa22.34■■□□□ 1.17
NME3-205ENST00000563854 MAP2K1Q02750 393 aaPredicted RBP22.34■■□□□ 1.17
NME3-205ENST00000563854 SCARF1Q14162 830 aa22.34■■□□□ 1.17
NME3-205ENST00000563854 ANGEL2Q5VTE6 544 aaKnown RBP22.34■■□□□ 1.17
NME3-205ENST00000563854 SSH1Q8WYL5 1049 aa22.34■■□□□ 1.17
NME3-205ENST00000563854 SUCLG2Q96I99 432 aa22.34■■□□□ 1.17
NME3-205ENST00000563854 GMLQ99445 158 aa22.34■■□□□ 1.17
NME3-205ENST00000563854 CNNM1Q9NRU3 951 aa22.34■■□□□ 1.17
NME3-205ENST00000563854 A0A1B0GUL6 1792 aa22.33■■□□□ 1.17
NME3-205ENST00000563854 THSD7BQ9C0I4 1608 aa22.33■■□□□ 1.17
NME3-205ENST00000563854 CTCFP49711 727 aaPredicted RBP22.33■■□□□ 1.17
NME3-205ENST00000563854 DACT2Q5SW24 774 aa22.33■■□□□ 1.17
NME3-205ENST00000563854 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.17
NME3-205ENST00000563854 CAPN15O75808 1086 aa22.32■■□□□ 1.16
NME3-205ENST00000563854 NBPF7P0C2Y1 421 aaPredicted RBP22.32■■□□□ 1.16
NME3-205ENST00000563854 HUNKP57058 714 aa22.32■■□□□ 1.16
NME3-205ENST00000563854 STRIP1Q5VSL9 837 aa22.32■■□□□ 1.16
NME3-205ENST00000563854 PTPRCP08575 1304 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 POLR2AP24928 1970 aaKnown RBP22.31■■□□□ 1.16
NME3-205ENST00000563854 CCER2I3L3R5 266 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 GTF2IP78347 998 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 TTLL5Q6EMB2 1281 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 OGFOD1Q8N543 542 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 BEGAINQ9BUH8 593 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 GBA2Q9HCG7 927 aaPredicted RBP22.31■■□□□ 1.16
NME3-205ENST00000563854 SMC4Q9NTJ3 1288 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 ZNF646O15015 1829 aaPredicted RBP22.31■■□□□ 1.16
NME3-205ENST00000563854 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
NME3-205ENST00000563854 LBX1P52954 281 aa22.3■■□□□ 1.16
NME3-205ENST00000563854 C2orf69Q8N8R5 385 aa22.3■■□□□ 1.16
NME3-205ENST00000563854 SCAF8Q9UPN6 1271 aaKnown RBP22.3■■□□□ 1.16
NME3-205ENST00000563854 KIAA0825Q8IV33 1275 aa22.29■■□□□ 1.16
NME3-205ENST00000563854 CDCA5Q96FF9 252 aa22.29■■□□□ 1.16
NME3-205ENST00000563854 BICC1Q9H694 974 aaKnown RBP22.29■■□□□ 1.16
NME3-205ENST00000563854 CD209Q9NNX6 404 aa22.29■■□□□ 1.16
NME3-205ENST00000563854 ZNF804AQ7Z570 1209 aa22.28■■□□□ 1.16
NME3-205ENST00000563854 KAZALD1Q96I82 304 aa22.28■■□□□ 1.16
NME3-205ENST00000563854 HHIPL1Q96JK4 782 aa22.28■■□□□ 1.16
NME3-205ENST00000563854 SASH1O94885 1247 aa22.27■■□□□ 1.16
NME3-205ENST00000563854 HSPA8P11142 646 aaKnown RBP22.27■■□□□ 1.16
NME3-205ENST00000563854 NBPF9Q3BBW0 867 aa22.27■■□□□ 1.16
NME3-205ENST00000563854 MAP2K2P36507 400 aa22.26■■□□□ 1.15
NME3-205ENST00000563854 ALDH1L2Q3SY69 923 aa22.26■■□□□ 1.15
NME3-205ENST00000563854 PUS3Q9BZE2 481 aaKnown RBP22.26■■□□□ 1.15
NME3-205ENST00000563854 PRDM10Q9NQV6 1147 aa22.26■■□□□ 1.15
NME3-205ENST00000563854 HDAC9Q9UKV0 1011 aa22.26■■□□□ 1.15
NME3-205ENST00000563854 JAG2Q9Y219 1238 aa22.26■■□□□ 1.15
NME3-205ENST00000563854 UTYO14607 1347 aa22.26■■□□□ 1.15
NME3-205ENST00000563854 IRS2Q9Y4H2 1338 aa22.26■■□□□ 1.15
NME3-205ENST00000563854 TSKSQ9UJT2 592 aa22.25■■□□□ 1.15
NME3-205ENST00000563854 PITPNM2Q9BZ72 1349 aa22.25■■□□□ 1.15
NME3-205ENST00000563854 RGMBQ6NW40 437 aa22.24■■□□□ 1.15
NME3-205ENST00000563854 C15orf52Q6ZUT6 534 aaKnown RBP22.24■■□□□ 1.15
NME3-205ENST00000563854 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
NME3-205ENST00000563854 WNT10BO00744 389 aa22.23■■□□□ 1.15
NME3-205ENST00000563854 ZNF157P51786 506 aaPredicted RBP22.23■■□□□ 1.15
NME3-205ENST00000563854 PRAMEF18Q5VWM3 479 aa22.23■■□□□ 1.15
NME3-205ENST00000563854 ANKRD44Q8N8A2 993 aa22.23■■□□□ 1.15
NME3-205ENST00000563854 NOGQ13253 232 aa22.22■■□□□ 1.15
NME3-205ENST00000563854 TRMT2AQ8IZ69 625 aaKnown RBP22.22■■□□□ 1.15
NME3-205ENST00000563854 IL1R1P14778 569 aa22.21■■□□□ 1.15
NME3-205ENST00000563854 RABL6Q3YEC7 729 aaPredicted RBP22.21■■□□□ 1.15
NME3-205ENST00000563854 CERS5Q8N5B7 392 aa22.21■■□□□ 1.15
NME3-205ENST00000563854 ZIC5Q96T25 663 aa22.21■■□□□ 1.15
NME3-205ENST00000563854 USP44Q9H0E7 712 aa22.21■■□□□ 1.15
NME3-205ENST00000563854 GYG1P46976 350 aa22.2■■□□□ 1.14
NME3-205ENST00000563854 BRPF1P55201 1214 aaPredicted RBP22.2■■□□□ 1.14
NME3-205ENST00000563854 TTLL12Q14166 644 aaPredicted RBP22.2■■□□□ 1.14
NME3-205ENST00000563854 LRRC24Q50LG9 513 aa22.2■■□□□ 1.14
NME3-205ENST00000563854 METTL24Q5JXM2 366 aa22.2■■□□□ 1.14
NME3-205ENST00000563854 KLHDC4Q8TBB5 520 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms