RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 FOXD4L5Q5VV16 416 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 NGEFQ8N5V2 710 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 FOXD4L4Q8WXT5 416 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 SLC10A4Q96EP9 437 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 ACSBG1Q96GR2 724 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 SLC52A2Q9HAB3 445 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 CDV3Q9UKY7 258 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
HERPUD1-207ENST00000563781 POM121CA8CG34 1229 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 BRD1O95696 1058 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 ALDH1A1P00352 501 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 ZNF853P0CG23 659 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 ARID5BQ14865 1188 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 FAM196AQ6ZSG2 479 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 VASH1Q7L8A9 365 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 PIGBQ92521 554 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 RTF1Q92541 710 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 PCDHB9Q9Y5E1 797 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 DOT1LQ8TEK3 1739 aa6.78□□□□□ -1.32
HERPUD1-207ENST00000563781 ZBED9Q6R2W3 1325 aa6.77□□□□□ -1.32
HERPUD1-207ENST00000563781 ADH1CP00326 375 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 SMPD1P17405 629 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 SOX11P35716 441 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 CABP4P57796 275 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 WDR63Q8IWG1 891 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 NFATC2IPQ8NCF5 419 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 ZNF592Q92610 1267 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 KCTD15Q96SI1 283 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 ALG2Q9H553 416 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 CEP126Q9P2H0 1117 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 NHSQ6T4R5 1651 aa6.77□□□□□ -1.33
HERPUD1-207ENST00000563781 IL16Q14005 1332 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 CHL1O00533 1208 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 NRG2O14511 850 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 KCNQ3O43525 872 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 TRIM37O94972 964 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 TEFQ10587 303 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 LAPTM4AQ15012 233 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 TAF7Q15545 349 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 ADAMTS19Q8TE59 1207 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 IRX2Q9BZI1 471 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 ATG3Q9NT62 314 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 IFT57Q9NWB7 429 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 TMOD3Q9NYL9 352 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 MIS18AQ9NYP9 233 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 SCN11AQ9UI33 1791 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 DLG5Q8TDM6 1919 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 KCPQ6ZWJ8 1503 aa6.76□□□□□ -1.33
HERPUD1-207ENST00000563781 ESPNB1AK53 854 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 GIGYF1O75420 1035 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 CALD1Q05682 793 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 SLFN5Q08AF3 891 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 NR5A1Q13285 461 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 SLC39A6Q13433 755 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 NBPF20Q3BBV1 942 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 TRMT2AQ8IZ69 625 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 ZNF428Q96B54 188 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 SYTL4Q96C24 671 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 YTHDC1Q96MU7 727 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 SLC4A9Q96Q91 983 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 BABAM1Q9NWV8 329 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 ASAP1Q9ULH1 1129 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 WASF2Q9Y6W5 498 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 PAPPAQ13219 1627 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 FANCIQ9NVI1 1328 aa6.75□□□□□ -1.33
HERPUD1-207ENST00000563781 SIPA1L3O60292 1781 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 PALLDQ8WX93 1383 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 HEG1Q9ULI3 1381 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 BTBD11A6QL63 1104 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 NR3C2P08235 984 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 EIF4A1P60842 406 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 GNAI1P63096 354 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 HDGFL1Q5TGJ6 251 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 DUSP27Q5VZP5 1158 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 ZNF790Q6PG37 636 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 PHTF2Q8N3S3 785 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 TSR2Q969E8 191 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 MBIPQ9NS73 344 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 TSPYL4Q9UJ04 414 aa6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 LAS1LQ9Y4W2 734 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-207ENST00000563781 TNS1Q9HBL0 1735 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 KDM3BQ7LBC6 1761 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 DGAT1O75907 488 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 FSHRP23945 695 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 NNTQ13423 1086 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 KRT24Q2M2I5 525 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 INTS6LQ5JSJ4 861 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 HPS1Q92902 700 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 PBXIP1Q96AQ6 731 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 SBF2Q86WG5 1849 aa6.73□□□□□ -1.33
HERPUD1-207ENST00000563781 BTAF1O14981 1849 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 ITGB4P16144 1822 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 LOC102724428A0A0B4J2F2 783 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 PRAMEF22A3QJZ6 481 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 FAM187AA6NFU0 413 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 PTCD1O75127 700 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 APBA3O96018 575 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 HMGB1P09429 215 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms