RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SCARF1Q14162 830 aa26.59■■□□□ 1.85
LINC01960-201ENST00000563759 CWC27Q6UX04 472 aaKnown RBP26.59■■□□□ 1.85
LINC01960-201ENST00000563759 SNRKQ9NRH2 765 aa26.59■■□□□ 1.85
LINC01960-201ENST00000563759 MCAMP43121 646 aa26.58■■□□□ 1.85
LINC01960-201ENST00000563759 RUFY2Q8WXA3 655 aa26.58■■□□□ 1.85
LINC01960-201ENST00000563759 KBTBD3Q8NAB2 608 aa26.57■■□□□ 1.84
LINC01960-201ENST00000563759 XDHP47989 1333 aa26.57■■□□□ 1.84
LINC01960-201ENST00000563759 MASTLQ96GX5 879 aa26.57■■□□□ 1.84
LINC01960-201ENST00000563759 DLEC1Q9Y238 1755 aa26.57■■□□□ 1.84
LINC01960-201ENST00000563759 DOCK2Q92608 1830 aa26.56■■□□□ 1.84
LINC01960-201ENST00000563759 PPEF1O14829 653 aaPredicted RBP26.56■■□□□ 1.84
LINC01960-201ENST00000563759 BCAMP50895 628 aa26.56■■□□□ 1.84
LINC01960-201ENST00000563759 CAVIN4Q5BKX8 364 aa26.56■■□□□ 1.84
LINC01960-201ENST00000563759 PI16Q6UXB8 463 aa26.56■■□□□ 1.84
LINC01960-201ENST00000563759 TMC4Q7Z404 712 aa26.56■■□□□ 1.84
LINC01960-201ENST00000563759 C2CD5Q86YS7 1000 aa26.56■■□□□ 1.84
LINC01960-201ENST00000563759 ZNF804BA4D1E1 1349 aa26.56■■□□□ 1.84
LINC01960-201ENST00000563759 ZAP70P43403 619 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 LTBP1Q14766 1721 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 WTIPA6NIX2 430 aaPredicted RBP26.55■■□□□ 1.84
LINC01960-201ENST00000563759 ALDH1B1P30837 517 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 SLC51AQ86UW1 340 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 VPS37DQ86XT2 251 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 ANTXR1Q9H6X2 564 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 ANO2Q9NQ90 1003 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 KIF13BQ9NQT8 1826 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 C10orf71Q711Q0 1435 aa26.55■■□□□ 1.84
LINC01960-201ENST00000563759 H0YIN7 160 aa26.54■■□□□ 1.84
LINC01960-201ENST00000563759 SGSM2O43147 1006 aa26.54■■□□□ 1.84
LINC01960-201ENST00000563759 GYG1P46976 350 aa26.54■■□□□ 1.84
LINC01960-201ENST00000563759 NMIQ13287 307 aaPredicted RBP26.53■■□□□ 1.84
LINC01960-201ENST00000563759 RASGRF1Q13972 1273 aa26.53■■□□□ 1.84
LINC01960-201ENST00000563759 ZNF622Q969S3 477 aaKnown RBP eCLIP26.53■■□□□ 1.84
LINC01960-201ENST00000563759 IL25Q9H293 177 aa26.53■■□□□ 1.84
LINC01960-201ENST00000563759 GNL3LQ9NVN8 582 aaKnown RBP26.53■■□□□ 1.84
LINC01960-201ENST00000563759 LEMD3Q9Y2U8 911 aa26.53■■□□□ 1.84
LINC01960-201ENST00000563759 ZBTB7AO95365 584 aa26.53■■□□□ 1.84
LINC01960-201ENST00000563759 R3HDM1Q15032 1099 aaKnown RBP26.53■■□□□ 1.84
LINC01960-201ENST00000563759 SPATA5Q8NB90 893 aa26.52■■□□□ 1.84
LINC01960-201ENST00000563759 FAM227BQ96M60 508 aa26.52■■□□□ 1.84
LINC01960-201ENST00000563759 NSFL1CQ9UNZ2 370 aaKnown RBP26.52■■□□□ 1.84
LINC01960-201ENST00000563759 RAD50Q92878 1312 aa26.51■■□□□ 1.83
LINC01960-201ENST00000563759 SLX4Q8IY92 1834 aa26.51■■□□□ 1.83
LINC01960-201ENST00000563759 KLRK1P26718 216 aa26.51■■□□□ 1.83
LINC01960-201ENST00000563759 RBM25P49756 843 aaKnown RBP26.51■■□□□ 1.83
LINC01960-201ENST00000563759 GPSM2P81274 684 aa26.51■■□□□ 1.83
LINC01960-201ENST00000563759 TTF1Q15361 905 aaPredicted RBP26.51■■□□□ 1.83
LINC01960-201ENST00000563759 HMG20BQ9P0W2 317 aa26.51■■□□□ 1.83
LINC01960-201ENST00000563759 LRRFIP1Q32MZ4 808 aaKnown RBP26.51■■□□□ 1.83
LINC01960-201ENST00000563759 TICAM2Q86XR7 235 aa26.51■■□□□ 1.83
LINC01960-201ENST00000563759 USP26Q9BXU7 913 aa26.51■■□□□ 1.83
LINC01960-201ENST00000563759 A0A0D9SFI3 127 aa26.5■■□□□ 1.83
LINC01960-201ENST00000563759 STYK1Q6J9G0 422 aa26.5■■□□□ 1.83
LINC01960-201ENST00000563759 MTFR1LQ9H019 292 aa26.5■■□□□ 1.83
LINC01960-201ENST00000563759 UFL1O94874 794 aa26.49■■□□□ 1.83
LINC01960-201ENST00000563759 KIAA1211Q6ZU35 1233 aa26.49■■□□□ 1.83
LINC01960-201ENST00000563759 SP8Q8IXZ3 490 aa26.49■■□□□ 1.83
LINC01960-201ENST00000563759 FAM84BQ96KN1 310 aaPredicted RBP26.49■■□□□ 1.83
LINC01960-201ENST00000563759 TMX4Q9H1E5 349 aaPredicted RBP26.49■■□□□ 1.83
LINC01960-201ENST00000563759 IQSEC3Q9UPP2 1182 aaPredicted RBP26.49■■□□□ 1.83
LINC01960-201ENST00000563759 ATP6V0A2Q9Y487 856 aa26.49■■□□□ 1.83
LINC01960-201ENST00000563759 CYP2E1P05181 493 aaPredicted RBP26.49■■□□□ 1.83
LINC01960-201ENST00000563759 GGA1Q9UJY5 639 aa26.49■■□□□ 1.83
LINC01960-201ENST00000563759 ATP2B4P23634 1241 aa26.48■■□□□ 1.83
LINC01960-201ENST00000563759 CHRNA5P30532 468 aa26.48■■□□□ 1.83
LINC01960-201ENST00000563759 POLD1P28340 1107 aa26.47■■□□□ 1.83
LINC01960-201ENST00000563759 HIBADHP31937 336 aaKnown RBP26.47■■□□□ 1.83
LINC01960-201ENST00000563759 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.47■■□□□ 1.83
LINC01960-201ENST00000563759 PODXL2Q9NZ53 605 aa26.47■■□□□ 1.83
LINC01960-201ENST00000563759 ATF5Q9Y2D1 282 aaPredicted RBP26.47■■□□□ 1.83
LINC01960-201ENST00000563759 MED23Q9ULK4 1368 aa26.46■■□□□ 1.83
LINC01960-201ENST00000563759 FRAT2O75474 233 aaPredicted RBP26.46■■□□□ 1.83
LINC01960-201ENST00000563759 FBXO33Q7Z6M2 555 aa26.46■■□□□ 1.83
LINC01960-201ENST00000563759 COL1A1P02452 1464 aaPredicted RBP26.46■■□□□ 1.83
LINC01960-201ENST00000563759 IRS2Q9Y4H2 1338 aa26.46■■□□□ 1.83
LINC01960-201ENST00000563759 RNF113AO15541 343 aaKnown RBP26.45■■□□□ 1.83
LINC01960-201ENST00000563759 CHGBP05060 677 aa26.45■■□□□ 1.83
LINC01960-201ENST00000563759 ZFYP08048 801 aaPredicted RBP26.45■■□□□ 1.83
LINC01960-201ENST00000563759 PRPF40BQ6NWY9 871 aaKnown RBP26.45■■□□□ 1.83
LINC01960-201ENST00000563759 CNKSR1Q969H4 720 aa26.45■■□□□ 1.83
LINC01960-201ENST00000563759 PIH1D3Q9NQM4 214 aaKnown RBP26.45■■□□□ 1.83
LINC01960-201ENST00000563759 SEMA3EO15041 775 aa26.45■■□□□ 1.82
LINC01960-201ENST00000563759 IDH1O75874 414 aaKnown RBP26.45■■□□□ 1.82
LINC01960-201ENST00000563759 MCCP23508 829 aa26.45■■□□□ 1.82
LINC01960-201ENST00000563759 TXNRD3Q86VQ6 643 aa26.45■■□□□ 1.82
LINC01960-201ENST00000563759 CCDC88AQ3V6T2 1871 aa26.44■■□□□ 1.82
LINC01960-201ENST00000563759 DUOX1Q9NRD9 1551 aa26.44■■□□□ 1.82
LINC01960-201ENST00000563759 PSDA5PKW4 1024 aaPredicted RBP26.44■■□□□ 1.82
LINC01960-201ENST00000563759 EPB41L2O43491 1005 aaKnown RBP26.44■■□□□ 1.82
LINC01960-201ENST00000563759 ZSCAN25Q6NSZ9 544 aa26.44■■□□□ 1.82
LINC01960-201ENST00000563759 GPR101Q96P66 508 aaPredicted RBP26.44■■□□□ 1.82
LINC01960-201ENST00000563759 DENND2AQ9ULE3 1009 aa26.44■■□□□ 1.82
LINC01960-201ENST00000563759 MCMDC2Q4G0Z9 681 aa26.43■■□□□ 1.82
LINC01960-201ENST00000563759 ZNF804AQ7Z570 1209 aa26.43■■□□□ 1.82
LINC01960-201ENST00000563759 TBC1D16Q8TBP0 767 aa26.43■■□□□ 1.82
LINC01960-201ENST00000563759 DDRGK1Q96HY6 314 aa26.43■■□□□ 1.82
LINC01960-201ENST00000563759 LSG1Q9H089 658 aaKnown RBP26.43■■□□□ 1.82
LINC01960-201ENST00000563759 C6orf229H3BNL8 230 aa26.42■■□□□ 1.82
LINC01960-201ENST00000563759 WASHC4Q2M389 1173 aa26.42■■□□□ 1.82
LINC01960-201ENST00000563759 C15orf52Q6ZUT6 534 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 1282.1 ms