RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 GREM2Q9H772 168 aa24■■□□□ 1.43
NME3-204ENST00000563498 MYO3BQ8WXR4 1341 aa24■■□□□ 1.43
NME3-204ENST00000563498 MMP14P50281 582 aa23.99■■□□□ 1.43
NME3-204ENST00000563498 CCT4P50991 539 aaKnown RBP23.99■■□□□ 1.43
NME3-204ENST00000563498 DACT2Q5SW24 774 aa23.99■■□□□ 1.43
NME3-204ENST00000563498 OGFOD1Q8N543 542 aa23.99■■□□□ 1.43
NME3-204ENST00000563498 STK31Q9BXU1 1019 aa23.99■■□□□ 1.43
NME3-204ENST00000563498 WTIPA6NIX2 430 aaPredicted RBP23.98■■□□□ 1.43
NME3-204ENST00000563498 STRIP1Q5VSL9 837 aa23.98■■□□□ 1.43
NME3-204ENST00000563498 COA1Q9GZY4 146 aa23.98■■□□□ 1.43
NME3-204ENST00000563498 ZNF646O15015 1829 aaPredicted RBP23.98■■□□□ 1.43
NME3-204ENST00000563498 NEURL1BA8MQ27 555 aa23.97■■□□□ 1.43
NME3-204ENST00000563498 NBPF9Q3BBW0 867 aa23.97■■□□□ 1.43
NME3-204ENST00000563498 LEMD3Q9Y2U8 911 aa23.97■■□□□ 1.43
NME3-204ENST00000563498 SPEF2Q9C093 1822 aa23.96■■□□□ 1.43
NME3-204ENST00000563498 H7C1W4 665 aa23.96■■□□□ 1.43
NME3-204ENST00000563498 CWF19L2Q2TBE0 894 aaKnown RBP23.96■■□□□ 1.43
NME3-204ENST00000563498 CTU1Q7Z7A3 348 aaKnown RBP23.96■■□□□ 1.43
NME3-204ENST00000563498 WNT10BO00744 389 aa23.95■■□□□ 1.42
NME3-204ENST00000563498 IGHMBP2P38935 993 aaKnown RBP23.95■■□□□ 1.42
NME3-204ENST00000563498 CCDC27Q2M243 656 aa23.95■■□□□ 1.42
NME3-204ENST00000563498 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
NME3-204ENST00000563498 TSR2Q969E8 191 aaKnown RBP23.95■■□□□ 1.42
NME3-204ENST00000563498 PLA2G12BQ9BX93 195 aa23.95■■□□□ 1.42
NME3-204ENST00000563498 UBE2Q2LH0YL09 131 aa23.93■■□□□ 1.42
NME3-204ENST00000563498 TWISTNBQ3B726 338 aaPredicted RBP23.93■■□□□ 1.42
NME3-204ENST00000563498 MOB2Q70IA6 237 aa23.93■■□□□ 1.42
NME3-204ENST00000563498 MXD3Q9BW11 206 aa23.93■■□□□ 1.42
NME3-204ENST00000563498 ANKRD2Q9GZV1 360 aa23.93■■□□□ 1.42
NME3-204ENST00000563498 SCAF8Q9UPN6 1271 aaKnown RBP23.93■■□□□ 1.42
NME3-204ENST00000563498 ZNF804BA4D1E1 1349 aa23.92■■□□□ 1.42
NME3-204ENST00000563498 NF2P35240 595 aa23.92■■□□□ 1.42
NME3-204ENST00000563498 TXNRD3Q86VQ6 643 aa23.92■■□□□ 1.42
NME3-204ENST00000563498 TNRC18O15417 2968 aaPredicted RBP23.91■■□□□ 1.42
NME3-204ENST00000563498 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
NME3-204ENST00000563498 GCKRQ14397 625 aa23.91■■□□□ 1.42
NME3-204ENST00000563498 PRAMEF18Q5VWM3 479 aa23.91■■□□□ 1.42
NME3-204ENST00000563498 G2E3Q7L622 706 aa23.91■■□□□ 1.42
NME3-204ENST00000563498 FBXW7Q969H0 707 aa23.91■■□□□ 1.42
NME3-204ENST00000563498 ITGA6P23229 1130 aa23.9■■□□□ 1.42
NME3-204ENST00000563498 TM4SF4P48230 202 aa23.9■■□□□ 1.42
NME3-204ENST00000563498 TTLL12Q14166 644 aaPredicted RBP23.9■■□□□ 1.42
NME3-204ENST00000563498 PKN2Q16513 984 aaKnown RBP23.9■■□□□ 1.42
NME3-204ENST00000563498 NOM1Q5C9Z4 860 aaKnown RBP23.9■■□□□ 1.42
NME3-204ENST00000563498 TTLL5Q6EMB2 1281 aa23.9■■□□□ 1.42
NME3-204ENST00000563498 WWC1Q8IX03 1113 aa23.9■■□□□ 1.42
NME3-204ENST00000563498 IL16Q14005 1332 aa23.89■■□□□ 1.42
NME3-204ENST00000563498 CSF1RP07333 972 aa23.89■■□□□ 1.41
NME3-204ENST00000563498 CASP7P55210 303 aa23.89■■□□□ 1.41
NME3-204ENST00000563498 SOX10P56693 466 aa23.89■■□□□ 1.41
NME3-204ENST00000563498 APOBEC3FQ8IUX4 373 aaKnown RBP23.89■■□□□ 1.41
NME3-204ENST00000563498 MPHOSPH8Q99549 860 aa23.89■■□□□ 1.41
NME3-204ENST00000563498 MYH16Q9H6N6 1097 aa23.89■■□□□ 1.41
NME3-204ENST00000563498 HDAC9Q9UKV0 1011 aa23.89■■□□□ 1.41
NME3-204ENST00000563498 SASH1O94885 1247 aa23.88■■□□□ 1.41
NME3-204ENST00000563498 FLIIQ13045 1269 aa23.88■■□□□ 1.41
NME3-204ENST00000563498 NCBP3Q53F19 620 aaKnown RBP23.88■■□□□ 1.41
NME3-204ENST00000563498 ZBED3Q96IU2 234 aaPredicted RBP23.88■■□□□ 1.41
NME3-204ENST00000563498 KLRK1P26718 216 aa23.87■■□□□ 1.41
NME3-204ENST00000563498 LINS1Q8NG48 757 aa23.87■■□□□ 1.41
NME3-204ENST00000563498 ZNF296Q8WUU4 475 aaPredicted RBP23.87■■□□□ 1.41
NME3-204ENST00000563498 TBC1D8O95759 1140 aa23.86■■□□□ 1.41
NME3-204ENST00000563498 SREBF2Q12772 1141 aa23.86■■□□□ 1.41
NME3-204ENST00000563498 ARMC9Q7Z3E5 817 aa23.86■■□□□ 1.41
NME3-204ENST00000563498 KIAA0825Q8IV33 1275 aa23.86■■□□□ 1.41
NME3-204ENST00000563498 CFHR5Q9BXR6 569 aa23.86■■□□□ 1.41
NME3-204ENST00000563498 HPS5Q9UPZ3 1129 aa23.86■■□□□ 1.41
NME3-204ENST00000563498 COL1A1P02452 1464 aaPredicted RBP23.86■■□□□ 1.41
NME3-204ENST00000563498 KCNJ4P48050 445 aa23.85■■□□□ 1.41
NME3-204ENST00000563498 GTF2IP78347 998 aa23.85■■□□□ 1.41
NME3-204ENST00000563498 CHRNDQ07001 517 aa23.85■■□□□ 1.41
NME3-204ENST00000563498 DNAAF4Q8WXU2 420 aa23.85■■□□□ 1.41
NME3-204ENST00000563498 PTPN12Q05209 780 aaKnown RBP23.84■■□□□ 1.41
NME3-204ENST00000563498 FKBP5Q13451 457 aaPredicted RBP23.84■■□□□ 1.41
NME3-204ENST00000563498 LDLRAD1Q5T700 205 aa23.84■■□□□ 1.41
NME3-204ENST00000563498 C15orf52Q6ZUT6 534 aaKnown RBP23.84■■□□□ 1.41
NME3-204ENST00000563498 CD209Q9NNX6 404 aa23.84■■□□□ 1.41
NME3-204ENST00000563498 PDE4DIPQ5VU43 2346 aa23.84■■□□□ 1.41
NME3-204ENST00000563498 ANKRD18BA2A2Z9 1011 aa23.83■■□□□ 1.41
NME3-204ENST00000563498 GPR25O00155 361 aa23.83■■□□□ 1.41
NME3-204ENST00000563498 CACNA1FO60840 1977 aa23.83■■□□□ 1.41
NME3-204ENST00000563498 IRS2Q9Y4H2 1338 aa23.83■■□□□ 1.4
NME3-204ENST00000563498 MTMR14Q8NCE2 650 aa23.82■■□□□ 1.4
NME3-204ENST00000563498 MKRN3Q13064 507 aaKnown RBP23.81■■□□□ 1.4
NME3-204ENST00000563498 CCDC184Q52MB2 194 aa23.81■■□□□ 1.4
NME3-204ENST00000563498 SPRYD7Q5W111 196 aa23.81■■□□□ 1.4
NME3-204ENST00000563498 DLGAP5Q15398 846 aa23.8■■□□□ 1.4
NME3-204ENST00000563498 DEFB129Q9H1M3 183 aa23.8■■□□□ 1.4
NME3-204ENST00000563498 ANGEL1Q9UNK9 670 aaKnown RBP23.8■■□□□ 1.4
NME3-204ENST00000563498 PPP2R3BQ9Y5P8 575 aa23.8■■□□□ 1.4
NME3-204ENST00000563498 FANCIQ9NVI1 1328 aa23.8■■□□□ 1.4
NME3-204ENST00000563498 ALDH1A1P00352 501 aa23.79■■□□□ 1.4
NME3-204ENST00000563498 FKBP1AP62942 108 aaKnown RBP23.79■■□□□ 1.4
NME3-204ENST00000563498 IFIT5Q13325 482 aaKnown RBP23.79■■□□□ 1.4
NME3-204ENST00000563498 PRKG1Q13976 671 aa23.79■■□□□ 1.4
NME3-204ENST00000563498 MAP3K11Q16584 847 aa23.79■■□□□ 1.4
NME3-204ENST00000563498 FBXO46Q6PJ61 603 aaPredicted RBP23.79■■□□□ 1.4
NME3-204ENST00000563498 CERS5Q8N5B7 392 aa23.79■■□□□ 1.4
NME3-204ENST00000563498 UNCXA6NJT0 531 aa23.78■■□□□ 1.4
NME3-204ENST00000563498 FKTNO75072 461 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms