RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 CSF1RP07333 972 aa26.79■■□□□ 1.88
CHD9-208ENST00000563410 EXOSC9Q06265 439 aaKnown RBP26.79■■□□□ 1.88
CHD9-208ENST00000563410 NOGQ13253 232 aa26.79■■□□□ 1.88
CHD9-208ENST00000563410 SCARF1Q14162 830 aa26.79■■□□□ 1.88
CHD9-208ENST00000563410 SULF1Q8IWU6 871 aa26.79■■□□□ 1.88
CHD9-208ENST00000563410 LINS1Q8NG48 757 aa26.79■■□□□ 1.88
CHD9-208ENST00000563410 FAM155AB1AL88 458 aaPredicted RBP26.78■■□□□ 1.88
CHD9-208ENST00000563410 CA12O43570 354 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 USP17L8P0C7I0 530 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 ITGA6P23229 1130 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
CHD9-208ENST00000563410 ANGEL2Q5VTE6 544 aaKnown RBP26.78■■□□□ 1.88
CHD9-208ENST00000563410 RGMBQ6NW40 437 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 TXNRD3Q86VQ6 643 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 C2orf69Q8N8R5 385 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 MYH16Q9H6N6 1097 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 MYOZ2Q9NPC6 264 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 SPINK5Q9NQ38 1064 aaPredicted RBP26.78■■□□□ 1.88
CHD9-208ENST00000563410 A0A1B0GUL6 1792 aa26.78■■□□□ 1.88
CHD9-208ENST00000563410 IGHMBP2P38935 993 aaKnown RBP26.77■■□□□ 1.88
CHD9-208ENST00000563410 FAM161AQ3B820 660 aa26.77■■□□□ 1.88
CHD9-208ENST00000563410 CDCA5Q96FF9 252 aa26.77■■□□□ 1.88
CHD9-208ENST00000563410 ABHD8Q96I13 439 aa26.77■■□□□ 1.88
CHD9-208ENST00000563410 LEMD3Q9Y2U8 911 aa26.76■■□□□ 1.87
CHD9-208ENST00000563410 DACT2Q5SW24 774 aa26.75■■□□□ 1.87
CHD9-208ENST00000563410 MXD3Q9BW11 206 aa26.75■■□□□ 1.87
CHD9-208ENST00000563410 COA1Q9GZY4 146 aa26.75■■□□□ 1.87
CHD9-208ENST00000563410 AKAP11Q9UKA4 1901 aa26.75■■□□□ 1.87
CHD9-208ENST00000563410 PITPNM2Q9BZ72 1349 aa26.73■■□□□ 1.87
CHD9-208ENST00000563410 KLRK1P26718 216 aa26.73■■□□□ 1.87
CHD9-208ENST00000563410 ZNF804BA4D1E1 1349 aa26.72■■□□□ 1.87
CHD9-208ENST00000563410 F6X3S4 739 aa26.72■■□□□ 1.87
CHD9-208ENST00000563410 ZNF157P51786 506 aaPredicted RBP26.72■■□□□ 1.87
CHD9-208ENST00000563410 STRIP1Q5VSL9 837 aa26.72■■□□□ 1.87
CHD9-208ENST00000563410 MPHOSPH8Q99549 860 aa26.72■■□□□ 1.87
CHD9-208ENST00000563410 ANKRD2Q9GZV1 360 aa26.72■■□□□ 1.87
CHD9-208ENST00000563410 PAPPA2Q9BXP8 1791 aa26.71■■□□□ 1.87
CHD9-208ENST00000563410 BEND3Q5T5X7 828 aa26.71■■□□□ 1.87
CHD9-208ENST00000563410 CCDC102AQ96A19 550 aa26.71■■□□□ 1.87
CHD9-208ENST00000563410 SCAF8Q9UPN6 1271 aaKnown RBP26.71■■□□□ 1.87
CHD9-208ENST00000563410 FOXO4P98177 505 aa26.7■■□□□ 1.86
CHD9-208ENST00000563410 CHRNDQ07001 517 aa26.7■■□□□ 1.86
CHD9-208ENST00000563410 NBPF9Q3BBW0 867 aa26.7■■□□□ 1.86
CHD9-208ENST00000563410 MYO3BQ8WXR4 1341 aa26.69■■□□□ 1.86
CHD9-208ENST00000563410 SLC10A3P09131 477 aa26.69■■□□□ 1.86
CHD9-208ENST00000563410 KIF23Q02241 960 aaPredicted RBP26.69■■□□□ 1.86
CHD9-208ENST00000563410 FBXW7Q969H0 707 aa26.69■■□□□ 1.86
CHD9-208ENST00000563410 IRS2Q9Y4H2 1338 aa26.68■■□□□ 1.86
CHD9-208ENST00000563410 ANKRD18BA2A2Z9 1011 aa26.68■■□□□ 1.86
CHD9-208ENST00000563410 SNAP23O00161 211 aa26.67■■□□□ 1.86
CHD9-208ENST00000563410 WNT10BO00744 389 aa26.67■■□□□ 1.86
CHD9-208ENST00000563410 TTLL5Q6EMB2 1281 aa26.67■■□□□ 1.86
CHD9-208ENST00000563410 FAM9BQ8IZU0 186 aa26.67■■□□□ 1.86
CHD9-208ENST00000563410 FKBP1BP68106 108 aa26.66■■□□□ 1.86
CHD9-208ENST00000563410 OGFOD1Q8N543 542 aa26.66■■□□□ 1.86
CHD9-208ENST00000563410 EPHA10Q5JZY3 1008 aa26.65■■□□□ 1.86
CHD9-208ENST00000563410 TAF5LO75529 589 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 GTF2IP78347 998 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 IFIT5Q13325 482 aaKnown RBP26.64■■□□□ 1.86
CHD9-208ENST00000563410 PRAMEF18Q5VWM3 479 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 MOB2Q70IA6 237 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 RASAL3Q86YV0 1011 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 HELBQ8NG08 1087 aaPredicted RBP26.64■■□□□ 1.86
CHD9-208ENST00000563410 CSRNP1Q96S65 589 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 MCOLN1Q9GZU1 580 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 CD209Q9NNX6 404 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 SAGE1Q9NXZ1 904 aa26.64■■□□□ 1.86
CHD9-208ENST00000563410 KCNJ4P48050 445 aa26.63■■□□□ 1.85
CHD9-208ENST00000563410 MMP14P50281 582 aa26.63■■□□□ 1.85
CHD9-208ENST00000563410 LMBR1LQ6UX01 489 aa26.63■■□□□ 1.85
CHD9-208ENST00000563410 C15orf52Q6ZUT6 534 aaKnown RBP26.63■■□□□ 1.85
CHD9-208ENST00000563410 ECM29Q5VYK3 1845 aa26.62■■□□□ 1.85
CHD9-208ENST00000563410 SASH1O94885 1247 aa26.62■■□□□ 1.85
CHD9-208ENST00000563410 KIAA0825Q8IV33 1275 aa26.62■■□□□ 1.85
CHD9-208ENST00000563410 RNF186Q9NXI6 227 aa26.62■■□□□ 1.85
CHD9-208ENST00000563410 CHMP3Q9Y3E7 222 aa26.62■■□□□ 1.85
CHD9-208ENST00000563410 GRM8O00222 908 aa26.61■■□□□ 1.85
CHD9-208ENST00000563410 ZBED3Q96IU2 234 aaPredicted RBP26.61■■□□□ 1.85
CHD9-208ENST00000563410 ZNF521Q96K83 1311 aa26.61■■□□□ 1.85
CHD9-208ENST00000563410 TRPA1O75762 1119 aa26.6■■□□□ 1.85
CHD9-208ENST00000563410 ZNF594Q96JF6 807 aaPredicted RBP26.6■■□□□ 1.85
CHD9-208ENST00000563410 CCDC85CA6NKD9 419 aa26.59■■□□□ 1.85
CHD9-208ENST00000563410 UBE2Q2LH0YL09 131 aa26.59■■□□□ 1.85
CHD9-208ENST00000563410 CERS5Q8N5B7 392 aa26.59■■□□□ 1.85
CHD9-208ENST00000563410 ALDH1L1O75891 902 aa26.58■■□□□ 1.85
CHD9-208ENST00000563410 DGKZQ13574 1117 aa26.58■■□□□ 1.85
CHD9-208ENST00000563410 HDAC9Q9UKV0 1011 aa26.58■■□□□ 1.85
CHD9-208ENST00000563410 IL1R1P14778 569 aa26.57■■□□□ 1.84
CHD9-208ENST00000563410 CCDC57Q2TAC2 916 aa26.57■■□□□ 1.84
CHD9-208ENST00000563410 SLC4A10Q6U841 1118 aa26.56■■□□□ 1.84
CHD9-208ENST00000563410 LDHAL6AQ6ZMR3 332 aa26.56■■□□□ 1.84
CHD9-208ENST00000563410 REM2Q8IYK8 340 aaPredicted RBP26.56■■□□□ 1.84
CHD9-208ENST00000563410 SRCIN1Q9C0H9 1055 aa26.56■■□□□ 1.84
CHD9-208ENST00000563410 C9orf78Q9NZ63 289 aaPredicted RBP26.56■■□□□ 1.84
CHD9-208ENST00000563410 KAZALD1Q96I82 304 aa26.55■■□□□ 1.84
CHD9-208ENST00000563410 ZNF804AQ7Z570 1209 aa26.54■■□□□ 1.84
CHD9-208ENST00000563410 APOBEC3FQ8IUX4 373 aaKnown RBP26.54■■□□□ 1.84
CHD9-208ENST00000563410 SUCLG2Q96I99 432 aa26.54■■□□□ 1.84
CHD9-208ENST00000563410 PLIN1O60240 522 aa26.53■■□□□ 1.84
CHD9-208ENST00000563410 NF2P35240 595 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 468.8 ms