RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 GCC1Q96CN9 775 aa23.2■■□□□ 1.3
RAB40C-207ENST00000563109 SNAP23O00161 211 aa23.19■■□□□ 1.3
RAB40C-207ENST00000563109 LRRCC1Q9C099 1032 aa23.19■■□□□ 1.3
RAB40C-207ENST00000563109 GPR108Q9NPR9 543 aa23.19■■□□□ 1.3
RAB40C-207ENST00000563109 RNF181Q9P0P0 153 aa23.19■■□□□ 1.3
RAB40C-207ENST00000563109 ZBTB47Q9UFB7 747 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-207ENST00000563109 CHD4Q14839 1912 aa23.18■■□□□ 1.3
RAB40C-207ENST00000563109 FGFR2P21802 821 aa23.18■■□□□ 1.3
RAB40C-207ENST00000563109 C15orf52Q6ZUT6 534 aaKnown RBP23.18■■□□□ 1.3
RAB40C-207ENST00000563109 NIM1KQ8IY84 436 aa23.18■■□□□ 1.3
RAB40C-207ENST00000563109 JDP2Q8WYK2 163 aa23.18■■□□□ 1.3
RAB40C-207ENST00000563109 WTIPA6NIX2 430 aaPredicted RBP23.17■■□□□ 1.3
RAB40C-207ENST00000563109 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
RAB40C-207ENST00000563109 ZNF804AQ7Z570 1209 aa23.17■■□□□ 1.3
RAB40C-207ENST00000563109 CLASRPQ8N2M8 674 aaKnown RBP23.17■■□□□ 1.3
RAB40C-207ENST00000563109 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
RAB40C-207ENST00000563109 A0A1B0GUL7 405 aa23.16■■□□□ 1.3
RAB40C-207ENST00000563109 IGHDP01880 384 aa23.16■■□□□ 1.3
RAB40C-207ENST00000563109 KLRK1P26718 216 aa23.16■■□□□ 1.3
RAB40C-207ENST00000563109 CAVIN4Q5BKX8 364 aa23.16■■□□□ 1.3
RAB40C-207ENST00000563109 C9orf131Q5VYM1 1079 aa23.16■■□□□ 1.3
RAB40C-207ENST00000563109 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
RAB40C-207ENST00000563109 NEUROD6Q96NK8 337 aa23.16■■□□□ 1.3
RAB40C-207ENST00000563109 PRELPP51888 382 aa23.15■■□□□ 1.3
RAB40C-207ENST00000563109 IL1RAPL2Q9NP60 686 aa23.15■■□□□ 1.3
RAB40C-207ENST00000563109 IRS2Q9Y4H2 1338 aa23.14■■□□□ 1.3
RAB40C-207ENST00000563109 MYH13Q9UKX3 1938 aa23.14■■□□□ 1.3
RAB40C-207ENST00000563109 COL4A5P29400 1685 aa23.14■■□□□ 1.29
RAB40C-207ENST00000563109 GORABQ5T7V8 394 aa23.14■■□□□ 1.29
RAB40C-207ENST00000563109 AACSQ86V21 672 aa23.14■■□□□ 1.29
RAB40C-207ENST00000563109 COA1Q9GZY4 146 aa23.14■■□□□ 1.29
RAB40C-207ENST00000563109 BCL11AQ9H165 835 aa23.14■■□□□ 1.29
RAB40C-207ENST00000563109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.14■■□□□ 1.29
RAB40C-207ENST00000563109 ECE2O60344 883 aa23.13■■□□□ 1.29
RAB40C-207ENST00000563109 TIMM10P62072 90 aa23.13■■□□□ 1.29
RAB40C-207ENST00000563109 DOK7Q18PE1 504 aa23.13■■□□□ 1.29
RAB40C-207ENST00000563109 TXNRD3Q86VQ6 643 aa23.13■■□□□ 1.29
RAB40C-207ENST00000563109 SMC5Q8IY18 1101 aa23.13■■□□□ 1.29
RAB40C-207ENST00000563109 CCDC136Q96JN2 1154 aa23.13■■□□□ 1.29
RAB40C-207ENST00000563109 DBNDD1Q9H9R9 158 aa23.13■■□□□ 1.29
RAB40C-207ENST00000563109 GOLGB1Q14789 3259 aaKnown RBP23.12■■□□□ 1.29
RAB40C-207ENST00000563109 IFIT2P09913 472 aaKnown RBP23.12■■□□□ 1.29
RAB40C-207ENST00000563109 HIBADHP31937 336 aaKnown RBP23.12■■□□□ 1.29
RAB40C-207ENST00000563109 GYG1P46976 350 aa23.12■■□□□ 1.29
RAB40C-207ENST00000563109 XAGE2Q96GT9 111 aa23.12■■□□□ 1.29
RAB40C-207ENST00000563109 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
RAB40C-207ENST00000563109 SMARCA5O60264 1052 aaPredicted RBP23.11■■□□□ 1.29
RAB40C-207ENST00000563109 ADORA1P30542 326 aa23.11■■□□□ 1.29
RAB40C-207ENST00000563109 ANKRD45Q5TZF3 282 aa23.11■■□□□ 1.29
RAB40C-207ENST00000563109 GNL3LQ9NVN8 582 aaKnown RBP23.11■■□□□ 1.29
RAB40C-207ENST00000563109 ZNRF3Q9ULT6 936 aa23.11■■□□□ 1.29
RAB40C-207ENST00000563109 PSME4Q14997 1843 aa23.1■■□□□ 1.29
RAB40C-207ENST00000563109 PODNQ7Z5L7 613 aa23.1■■□□□ 1.29
RAB40C-207ENST00000563109 EAF2Q96CJ1 260 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-207ENST00000563109 FAM84BQ96KN1 310 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-207ENST00000563109 CCDC8Q9H0W5 538 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-207ENST00000563109 PPP4R2Q9NY27 417 aa23.1■■□□□ 1.29
RAB40C-207ENST00000563109 EIF6P56537 245 aaKnown RBP23.09■■□□□ 1.29
RAB40C-207ENST00000563109 B4GALNT3Q6L9W6 998 aa23.09■■□□□ 1.29
RAB40C-207ENST00000563109 FBXO33Q7Z6M2 555 aa23.09■■□□□ 1.29
RAB40C-207ENST00000563109 CD209Q9NNX6 404 aa23.09■■□□□ 1.29
RAB40C-207ENST00000563109 FRAT2O75474 233 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-207ENST00000563109 BCAMP50895 628 aa23.08■■□□□ 1.29
RAB40C-207ENST00000563109 CCDC158Q5M9N0 1113 aa23.08■■□□□ 1.29
RAB40C-207ENST00000563109 CENPQQ7L2Z9 268 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-207ENST00000563109 DBNDD2Q9BQY9 259 aa23.08■■□□□ 1.29
RAB40C-207ENST00000563109 FZD9O00144 591 aa23.07■■□□□ 1.28
RAB40C-207ENST00000563109 IL1R1P14778 569 aa23.07■■□□□ 1.28
RAB40C-207ENST00000563109 TTC39AQ5SRH9 613 aa23.07■■□□□ 1.28
RAB40C-207ENST00000563109 CCDC102BQ68D86 513 aa23.07■■□□□ 1.28
RAB40C-207ENST00000563109 DBNLQ9UJU6 430 aaKnown RBP23.07■■□□□ 1.28
RAB40C-207ENST00000563109 SCN9AQ15858 1988 aa23.07■■□□□ 1.28
RAB40C-207ENST00000563109 PHKA1P46020 1223 aa23.06■■□□□ 1.28
RAB40C-207ENST00000563109 FBXW7Q969H0 707 aa23.06■■□□□ 1.28
RAB40C-207ENST00000563109 GPATCH3Q96I76 525 aa23.06■■□□□ 1.28
RAB40C-207ENST00000563109 TLR7Q9NYK1 1049 aaKnown RBP23.06■■□□□ 1.28
RAB40C-207ENST00000563109 YDJCA8MPS7 323 aa23.05■■□□□ 1.28
RAB40C-207ENST00000563109 UQCRFS1P1P0C7P4 283 aa23.05■■□□□ 1.28
RAB40C-207ENST00000563109 NUCB1Q02818 461 aa23.05■■□□□ 1.28
RAB40C-207ENST00000563109 CIAPIN1Q6FI81 312 aa23.05■■□□□ 1.28
RAB40C-207ENST00000563109 TDRD7Q8NHU6 1098 aaKnown RBP23.05■■□□□ 1.28
RAB40C-207ENST00000563109 SEMA3EO15041 775 aa23.04■■□□□ 1.28
RAB40C-207ENST00000563109 RAD17O75943 681 aa23.04■■□□□ 1.28
RAB40C-207ENST00000563109 TNIP1Q15025 636 aa23.04■■□□□ 1.28
RAB40C-207ENST00000563109 CHD1LQ86WJ1 897 aa23.04■■□□□ 1.28
RAB40C-207ENST00000563109 LNPKQ9C0E8 428 aa23.04■■□□□ 1.28
RAB40C-207ENST00000563109 IQSEC3Q9UPP2 1182 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-207ENST00000563109 KDM2BQ8NHM5 1336 aa23.04■■□□□ 1.28
RAB40C-207ENST00000563109 ZNF541Q9H0D2 1346 aa23.04■■□□□ 1.28
RAB40C-207ENST00000563109 USP17L3A6NCW0 530 aa23.03■■□□□ 1.28
RAB40C-207ENST00000563109 USP17L4A6NCW7 530 aa23.03■■□□□ 1.28
RAB40C-207ENST00000563109 USP17L1Q7RTZ2 530 aa23.03■■□□□ 1.28
RAB40C-207ENST00000563109 DENND2AQ9ULE3 1009 aa23.03■■□□□ 1.28
RAB40C-207ENST00000563109 ZNF646O15015 1829 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-207ENST00000563109 ARID4AP29374 1257 aaPredicted RBP23.02■■□□□ 1.28
RAB40C-207ENST00000563109 GTF2IP78347 998 aa23.02■■□□□ 1.28
RAB40C-207ENST00000563109 CXCL9Q07325 125 aa23.02■■□□□ 1.28
RAB40C-207ENST00000563109 CHAF1AQ13111 956 aaPredicted RBP23.02■■□□□ 1.28
RAB40C-207ENST00000563109 DPY19L2Q6NUT2 758 aa23.02■■□□□ 1.28
RAB40C-207ENST00000563109 STRIP1Q5VSL9 837 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms