RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 CASP8AP2Q9UKL3 1982 aa19.97■□□□□ 0.79
SF3B3-203ENST00000562874 ZNF804BA4D1E1 1349 aa19.97■□□□□ 0.79
SF3B3-203ENST00000562874 USP17L3A6NCW0 530 aa19.96■□□□□ 0.79
SF3B3-203ENST00000562874 USP17L4A6NCW7 530 aa19.96■□□□□ 0.79
SF3B3-203ENST00000562874 SNAP23O00161 211 aa19.96■□□□□ 0.79
SF3B3-203ENST00000562874 USP17L1Q7RTZ2 530 aa19.96■□□□□ 0.79
SF3B3-203ENST00000562874 KRT26Q7Z3Y9 468 aa19.96■□□□□ 0.79
SF3B3-203ENST00000562874 TNS4Q8IZW8 715 aa19.96■□□□□ 0.79
SF3B3-203ENST00000562874 AIDAQ96BJ3 306 aa19.96■□□□□ 0.79
SF3B3-203ENST00000562874 ZNF594Q96JF6 807 aaPredicted RBP19.96■□□□□ 0.79
SF3B3-203ENST00000562874 PAPPA2Q9BXP8 1791 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 TAF5LO75529 589 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 KCNJ4P48050 445 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 LMBR1LQ6UX01 489 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 PODNQ7Z5L7 613 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 SAPCD2Q86UD0 394 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 AGBL3Q8NEM8 1001 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 HELBQ8NG08 1087 aaPredicted RBP19.95■□□□□ 0.78
SF3B3-203ENST00000562874 CDCA7LQ96GN5 454 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 SRCIN1Q9C0H9 1055 aa19.95■□□□□ 0.78
SF3B3-203ENST00000562874 C9orf78Q9NZ63 289 aaPredicted RBP19.95■□□□□ 0.78
SF3B3-203ENST00000562874 E9PSI1 815 aa19.94■□□□□ 0.78
SF3B3-203ENST00000562874 AOC2O75106 756 aa19.94■□□□□ 0.78
SF3B3-203ENST00000562874 IFIT5Q13325 482 aaKnown RBP19.94■□□□□ 0.78
SF3B3-203ENST00000562874 MRPL50Q8N5N7 158 aaKnown RBP19.94■□□□□ 0.78
SF3B3-203ENST00000562874 DCPSQ96C86 337 aaKnown RBP19.94■□□□□ 0.78
SF3B3-203ENST00000562874 GMLQ99445 158 aa19.94■□□□□ 0.78
SF3B3-203ENST00000562874 ANKRD2Q9GZV1 360 aa19.94■□□□□ 0.78
SF3B3-203ENST00000562874 WBP1LQ9NX94 342 aa19.94■□□□□ 0.78
SF3B3-203ENST00000562874 SCAF8Q9UPN6 1271 aaKnown RBP19.94■□□□□ 0.78
SF3B3-203ENST00000562874 LEMD3Q9Y2U8 911 aa19.94■□□□□ 0.78
SF3B3-203ENST00000562874 CAPN15O75808 1086 aa19.93■□□□□ 0.78
SF3B3-203ENST00000562874 ECE1P42892 770 aa19.93■□□□□ 0.78
SF3B3-203ENST00000562874 ZNF280AP59817 542 aaPredicted RBP19.93■□□□□ 0.78
SF3B3-203ENST00000562874 DACT2Q5SW24 774 aa19.93■□□□□ 0.78
SF3B3-203ENST00000562874 SUCLG2Q96I99 432 aa19.93■□□□□ 0.78
SF3B3-203ENST00000562874 ALDH1L1O75891 902 aa19.92■□□□□ 0.78
SF3B3-203ENST00000562874 USP17L8P0C7I0 530 aa19.92■□□□□ 0.78
SF3B3-203ENST00000562874 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
SF3B3-203ENST00000562874 TAF7LQ5H9L4 462 aa19.92■□□□□ 0.78
SF3B3-203ENST00000562874 ANGEL2Q5VTE6 544 aaKnown RBP19.92■□□□□ 0.78
SF3B3-203ENST00000562874 SSH1Q8WYL5 1049 aa19.92■□□□□ 0.78
SF3B3-203ENST00000562874 COA1Q9GZY4 146 aa19.92■□□□□ 0.78
SF3B3-203ENST00000562874 MYOZ2Q9NPC6 264 aa19.92■□□□□ 0.78
SF3B3-203ENST00000562874 NBPF7P0C2Y1 421 aaPredicted RBP19.91■□□□□ 0.78
SF3B3-203ENST00000562874 CTCFP49711 727 aaPredicted RBP19.91■□□□□ 0.78
SF3B3-203ENST00000562874 SCARF1Q14162 830 aa19.91■□□□□ 0.78
SF3B3-203ENST00000562874 IRS2Q9Y4H2 1338 aa19.91■□□□□ 0.78
SF3B3-203ENST00000562874 HSPA8P11142 646 aaKnown RBP19.9■□□□□ 0.78
SF3B3-203ENST00000562874 LBX1P52954 281 aa19.9■□□□□ 0.78
SF3B3-203ENST00000562874 HUNKP57058 714 aa19.9■□□□□ 0.78
SF3B3-203ENST00000562874 CCDC57Q2TAC2 916 aa19.9■□□□□ 0.78
SF3B3-203ENST00000562874 SULF1Q8IWU6 871 aa19.9■□□□□ 0.78
SF3B3-203ENST00000562874 KAZALD1Q96I82 304 aa19.9■□□□□ 0.78
SF3B3-203ENST00000562874 PLIN1O60240 522 aa19.89■□□□□ 0.77
SF3B3-203ENST00000562874 SASH1O94885 1247 aa19.89■□□□□ 0.77
SF3B3-203ENST00000562874 GTF2IP78347 998 aa19.89■□□□□ 0.77
SF3B3-203ENST00000562874 CDCA5Q96FF9 252 aa19.89■□□□□ 0.77
SF3B3-203ENST00000562874 OTOFQ9HC10 1997 aa19.89■□□□□ 0.77
SF3B3-203ENST00000562874 GBA2Q9HCG7 927 aaPredicted RBP19.89■□□□□ 0.77
SF3B3-203ENST00000562874 CNNM1Q9NRU3 951 aa19.89■□□□□ 0.77
SF3B3-203ENST00000562874 TSKSQ9UJT2 592 aa19.89■□□□□ 0.77
SF3B3-203ENST00000562874 PTPRCP08575 1304 aa19.88■□□□□ 0.77
SF3B3-203ENST00000562874 MYO3BQ8WXR4 1341 aa19.88■□□□□ 0.77
SF3B3-203ENST00000562874 MAP2K1Q02750 393 aaPredicted RBP19.88■□□□□ 0.77
SF3B3-203ENST00000562874 NBPF9Q3BBW0 867 aa19.88■□□□□ 0.77
SF3B3-203ENST00000562874 STRIP1Q5VSL9 837 aa19.88■□□□□ 0.77
SF3B3-203ENST00000562874 KIAA0825Q8IV33 1275 aa19.88■□□□□ 0.77
SF3B3-203ENST00000562874 JAG2Q9Y219 1238 aa19.88■□□□□ 0.77
SF3B3-203ENST00000562874 TTLL5Q6EMB2 1281 aa19.87■□□□□ 0.77
SF3B3-203ENST00000562874 LDHAL6AQ6ZMR3 332 aa19.87■□□□□ 0.77
SF3B3-203ENST00000562874 BICC1Q9H694 974 aaKnown RBP19.87■□□□□ 0.77
SF3B3-203ENST00000562874 CD209Q9NNX6 404 aa19.87■□□□□ 0.77
SF3B3-203ENST00000562874 SMC4Q9NTJ3 1288 aa19.87■□□□□ 0.77
SF3B3-203ENST00000562874 HHIPL1Q96JK4 782 aa19.86■□□□□ 0.77
SF3B3-203ENST00000562874 ZIC5Q96T25 663 aa19.86■□□□□ 0.77
SF3B3-203ENST00000562874 PUS3Q9BZE2 481 aaKnown RBP19.86■□□□□ 0.77
SF3B3-203ENST00000562874 UTYO14607 1347 aa19.85■□□□□ 0.77
SF3B3-203ENST00000562874 CCER2I3L3R5 266 aa19.85■□□□□ 0.77
SF3B3-203ENST00000562874 PRDM10Q9NQV6 1147 aa19.85■□□□□ 0.77
SF3B3-203ENST00000562874 LAMB1P07942 1786 aa19.85■□□□□ 0.77
SF3B3-203ENST00000562874 PITPNM2Q9BZ72 1349 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 WNT10BO00744 389 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 PRAMEF18Q5VWM3 479 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 OGFOD1Q8N543 542 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 CERS5Q8N5B7 392 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 ANKRD44Q8N8A2 993 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 C2orf69Q8N8R5 385 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 BEGAINQ9BUH8 593 aa19.84■□□□□ 0.77
SF3B3-203ENST00000562874 F8W031 263 aaPredicted RBP19.83■□□□□ 0.77
SF3B3-203ENST00000562874 MAP2K2P36507 400 aa19.83■□□□□ 0.77
SF3B3-203ENST00000562874 RGMBQ6NW40 437 aa19.83■□□□□ 0.77
SF3B3-203ENST00000562874 ZNF804AQ7Z570 1209 aa19.83■□□□□ 0.77
SF3B3-203ENST00000562874 ALDH1L2Q3SY69 923 aa19.82■□□□□ 0.76
SF3B3-203ENST00000562874 C15orf52Q6ZUT6 534 aaKnown RBP19.82■□□□□ 0.76
SF3B3-203ENST00000562874 MOB2Q70IA6 237 aa19.82■□□□□ 0.76
SF3B3-203ENST00000562874 TRMT2AQ8IZ69 625 aaKnown RBP19.82■□□□□ 0.76
SF3B3-203ENST00000562874 KLHDC4Q8TBB5 520 aa19.82■□□□□ 0.76
SF3B3-203ENST00000562874 PCDHAC2Q9Y5I4 1007 aa19.82■□□□□ 0.76
SF3B3-203ENST00000562874 FAM155AB1AL88 458 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms