RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 C6orf229H3BNL8 230 aa20.89■□□□□ 0.93
CDT1-202ENST00000562747 PSME4Q14997 1843 aa20.89■□□□□ 0.93
CDT1-202ENST00000562747 CA12O43570 354 aa20.88■□□□□ 0.93
CDT1-202ENST00000562747 HUNKP57058 714 aa20.88■□□□□ 0.93
CDT1-202ENST00000562747 FOXO4P98177 505 aa20.88■□□□□ 0.93
CDT1-202ENST00000562747 TBC1D16Q8TBP0 767 aa20.88■□□□□ 0.93
CDT1-202ENST00000562747 MCOLN1Q9GZU1 580 aa20.88■□□□□ 0.93
CDT1-202ENST00000562747 CCT4P50991 539 aaKnown RBP20.87■□□□□ 0.93
CDT1-202ENST00000562747 KRT26Q7Z3Y9 468 aa20.87■□□□□ 0.93
CDT1-202ENST00000562747 ASTN2O75129 1339 aaPredicted RBP20.86■□□□□ 0.93
CDT1-202ENST00000562747 FAM155AB1AL88 458 aaPredicted RBP20.86■□□□□ 0.93
CDT1-202ENST00000562747 IPO8O15397 1037 aaKnown RBP20.86■□□□□ 0.93
CDT1-202ENST00000562747 NBPF7P0C2Y1 421 aaPredicted RBP20.86■□□□□ 0.93
CDT1-202ENST00000562747 ITGA6P23229 1130 aa20.86■□□□□ 0.93
CDT1-202ENST00000562747 RBM26Q5T8P6 1007 aaKnown RBP20.86■□□□□ 0.93
CDT1-202ENST00000562747 BSDC1Q9NW68 430 aaPredicted RBP20.86■□□□□ 0.93
CDT1-202ENST00000562747 PODXL2Q9NZ53 605 aa20.86■□□□□ 0.93
CDT1-202ENST00000562747 BCAR3O75815 825 aa20.85■□□□□ 0.93
CDT1-202ENST00000562747 RPS12P25398 132 aaKnown RBP20.85■□□□□ 0.93
CDT1-202ENST00000562747 IGHMBP2P38935 993 aaKnown RBP20.85■□□□□ 0.93
CDT1-202ENST00000562747 NOGQ13253 232 aa20.85■□□□□ 0.93
CDT1-202ENST00000562747 GBA2Q9HCG7 927 aaPredicted RBP20.85■□□□□ 0.93
CDT1-202ENST00000562747 ZNF646O15015 1829 aaPredicted RBP20.84■□□□□ 0.93
CDT1-202ENST00000562747 SPEF2Q9C093 1822 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 ANKRD18BA2A2Z9 1011 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 KIF4BQ2VIQ3 1234 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 EPHA10Q5JZY3 1008 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 LMBR1LQ6UX01 489 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 SUCLG2Q96I99 432 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 EYA3Q99504 573 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 USP44Q9H0E7 712 aa20.84■□□□□ 0.93
CDT1-202ENST00000562747 RGS19P49795 217 aa20.83■□□□□ 0.93
CDT1-202ENST00000562747 IFIT5Q13325 482 aaKnown RBP20.83■□□□□ 0.93
CDT1-202ENST00000562747 GGA3Q9NZ52 723 aa20.83■□□□□ 0.93
CDT1-202ENST00000562747 ANKIB1Q9P2G1 1089 aa20.83■□□□□ 0.93
CDT1-202ENST00000562747 XDHP47989 1333 aa20.82■□□□□ 0.92
CDT1-202ENST00000562747 UFL1O94874 794 aa20.82■□□□□ 0.92
CDT1-202ENST00000562747 VIL1P09327 827 aaKnown RBP20.82■□□□□ 0.92
CDT1-202ENST00000562747 RGMBQ6NW40 437 aa20.82■□□□□ 0.92
CDT1-202ENST00000562747 DCPSQ96C86 337 aaKnown RBP20.82■□□□□ 0.92
CDT1-202ENST00000562747 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
CDT1-202ENST00000562747 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
CDT1-202ENST00000562747 CHMP3Q9Y3E7 222 aa20.82■□□□□ 0.92
CDT1-202ENST00000562747 ZNF609O15014 1411 aa20.81■□□□□ 0.92
CDT1-202ENST00000562747 MLLT1Q03111 559 aaPredicted RBP20.81■□□□□ 0.92
CDT1-202ENST00000562747 DGKZQ13574 1117 aa20.81■□□□□ 0.92
CDT1-202ENST00000562747 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
CDT1-202ENST00000562747 ATF7IPQ6VMQ6 1270 aa20.81■□□□□ 0.92
CDT1-202ENST00000562747 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
CDT1-202ENST00000562747 GGA1Q9UJY5 639 aa20.81■□□□□ 0.92
CDT1-202ENST00000562747 MINPP1Q9UNW1 487 aa20.81■□□□□ 0.92
CDT1-202ENST00000562747 TRIM27P14373 513 aa20.8■□□□□ 0.92
CDT1-202ENST00000562747 RABL6Q3YEC7 729 aaPredicted RBP20.8■□□□□ 0.92
CDT1-202ENST00000562747 INTS3Q68E01 1043 aaKnown RBP20.8■□□□□ 0.92
CDT1-202ENST00000562747 C2orf69Q8N8R5 385 aa20.8■□□□□ 0.92
CDT1-202ENST00000562747 ZC3H12CQ9C0D7 883 aaKnown RBP20.8■□□□□ 0.92
CDT1-202ENST00000562747 BICC1Q9H694 974 aaKnown RBP20.8■□□□□ 0.92
CDT1-202ENST00000562747 ATP2B4P23634 1241 aa20.79■□□□□ 0.92
CDT1-202ENST00000562747 KIF23Q02241 960 aaPredicted RBP20.79■□□□□ 0.92
CDT1-202ENST00000562747 ZKSCAN2Q63HK3 967 aa20.79■□□□□ 0.92
CDT1-202ENST00000562747 AKAP11Q9UKA4 1901 aa20.78■□□□□ 0.92
CDT1-202ENST00000562747 ZNF157P51786 506 aaPredicted RBP20.78■□□□□ 0.92
CDT1-202ENST00000562747 CDCA5Q96FF9 252 aa20.78■□□□□ 0.92
CDT1-202ENST00000562747 HDAC5Q9UQL6 1122 aa20.78■□□□□ 0.92
CDT1-202ENST00000562747 WTIPA6NIX2 430 aaPredicted RBP20.77■□□□□ 0.92
CDT1-202ENST00000562747 SLC10A3P09131 477 aa20.77■□□□□ 0.92
CDT1-202ENST00000562747 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.92
CDT1-202ENST00000562747 ZNF280AP59817 542 aaPredicted RBP20.77■□□□□ 0.92
CDT1-202ENST00000562747 TAF7LQ5H9L4 462 aa20.77■□□□□ 0.92
CDT1-202ENST00000562747 ANGEL2Q5VTE6 544 aaKnown RBP20.77■□□□□ 0.92
CDT1-202ENST00000562747 RSBN1LQ6PCB5 846 aaPredicted RBP20.77■□□□□ 0.92
CDT1-202ENST00000562747 SULF1Q8IWU6 871 aa20.77■□□□□ 0.92
CDT1-202ENST00000562747 ANKRD44Q8N8A2 993 aa20.77■□□□□ 0.92
CDT1-202ENST00000562747 ANKRD2Q9GZV1 360 aa20.77■□□□□ 0.92
CDT1-202ENST00000562747 PAPPA2Q9BXP8 1791 aa20.77■□□□□ 0.91
CDT1-202ENST00000562747 SLC34A2O95436 690 aa20.76■□□□□ 0.91
CDT1-202ENST00000562747 CCDC102AQ96A19 550 aa20.76■□□□□ 0.91
CDT1-202ENST00000562747 GMLQ99445 158 aa20.76■□□□□ 0.91
CDT1-202ENST00000562747 RNF186Q9NXI6 227 aa20.76■□□□□ 0.91
CDT1-202ENST00000562747 SAGE1Q9NXZ1 904 aa20.76■□□□□ 0.91
CDT1-202ENST00000562747 LEMD3Q9Y2U8 911 aa20.76■□□□□ 0.91
CDT1-202ENST00000562747 SCARF1Q14162 830 aa20.75■□□□□ 0.91
CDT1-202ENST00000562747 TNRC18O15417 2968 aaPredicted RBP20.74■□□□□ 0.91
CDT1-202ENST00000562747 G3V3G9 751 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 TRPA1O75762 1119 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 CHRNDQ07001 517 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 DCAF8Q5TAQ9 597 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 LDHAL6AQ6ZMR3 332 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 AGBL3Q8NEM8 1001 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 ZNF594Q96JF6 807 aaPredicted RBP20.74■□□□□ 0.91
CDT1-202ENST00000562747 SCAF8Q9UPN6 1271 aaKnown RBP20.74■□□□□ 0.91
CDT1-202ENST00000562747 TNNQ9UQP3 1299 aa20.74■□□□□ 0.91
CDT1-202ENST00000562747 MED23Q9ULK4 1368 aa20.73■□□□□ 0.91
CDT1-202ENST00000562747 GNAI3P08754 354 aa20.73■□□□□ 0.91
CDT1-202ENST00000562747 CSRNP1Q96S65 589 aa20.73■□□□□ 0.91
CDT1-202ENST00000562747 MEIS3Q99687 375 aa20.73■□□□□ 0.91
CDT1-202ENST00000562747 CNNM1Q9NRU3 951 aa20.73■□□□□ 0.91
CDT1-202ENST00000562747 MYOZ2Q9NPC6 264 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms