RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 WDR66Q8TBY9 1149 aa8.82□□□□□ -1
TCF4-216ENST00000562680 ESR2Q92731 530 aa8.82□□□□□ -1
TCF4-216ENST00000562680 CEP131Q9UPN4 1083 aa8.82□□□□□ -1
TCF4-216ENST00000562680 AFF2P51816 1311 aa8.82□□□□□ -1
TCF4-216ENST00000562680 TRAK2O60296 914 aa8.82□□□□□ -1
TCF4-216ENST00000562680 TPM1P09493 284 aa8.82□□□□□ -1
TCF4-216ENST00000562680 SSFA2P28290 1259 aa8.82□□□□□ -1
TCF4-216ENST00000562680 SKAP1Q86WV1 359 aa8.82□□□□□ -1
TCF4-216ENST00000562680 SEPT12Q8IYM1 358 aa8.82□□□□□ -1
TCF4-216ENST00000562680 SDF4Q9BRK5 362 aa8.82□□□□□ -1
TCF4-216ENST00000562680 SCAND2PQ9GZW5 306 aaPredicted RBP8.82□□□□□ -1
TCF4-216ENST00000562680 OSBPL3Q9H4L5 887 aa8.82□□□□□ -1
TCF4-216ENST00000562680 STAP2Q9UGK3 403 aa8.82□□□□□ -1
TCF4-216ENST00000562680 ALDH1B1P30837 517 aa8.82□□□□□ -1
TCF4-216ENST00000562680 APPBP2Q92624 585 aa8.82□□□□□ -1
TCF4-216ENST00000562680 NSFL1CQ9UNZ2 370 aaKnown RBP8.82□□□□□ -1
TCF4-216ENST00000562680 CEMIPQ8WUJ3 1361 aa8.82□□□□□ -1
TCF4-216ENST00000562680 MTX1Q13505 466 aa8.81□□□□□ -1
TCF4-216ENST00000562680 XAGE2Q96GT9 111 aa8.81□□□□□ -1
TCF4-216ENST00000562680 DBNDD2Q9BQY9 259 aa8.81□□□□□ -1
TCF4-216ENST00000562680 RBM27Q9P2N5 1060 aaKnown RBP8.81□□□□□ -1
TCF4-216ENST00000562680 COL3A1P02461 1466 aaPredicted RBP8.81□□□□□ -1
TCF4-216ENST00000562680 RPS8P62241 208 aaKnown RBP8.81□□□□□ -1
TCF4-216ENST00000562680 PROSER3Q2NL68 480 aa8.81□□□□□ -1
TCF4-216ENST00000562680 MYO1BO43795 1136 aa8.81□□□□□ -1
TCF4-216ENST00000562680 HIBADHP31937 336 aaKnown RBP8.81□□□□□ -1
TCF4-216ENST00000562680 PDE6BP35913 854 aa8.81□□□□□ -1
TCF4-216ENST00000562680 RBM25P49756 843 aaKnown RBP8.81□□□□□ -1
TCF4-216ENST00000562680 GNAQP50148 359 aa8.81□□□□□ -1
TCF4-216ENST00000562680 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
TCF4-216ENST00000562680 CCDC83Q8IWF9 413 aa8.81□□□□□ -1
TCF4-216ENST00000562680 GGA1Q9UJY5 639 aa8.81□□□□□ -1
TCF4-216ENST00000562680 RANBP6O60518 1105 aaKnown RBP8.81□□□□□ -1
TCF4-216ENST00000562680 TBC1D22AQ8WUA7 517 aa8.81□□□□□ -1
TCF4-216ENST00000562680 CCDC12Q8WUD4 166 aaPredicted RBP8.81□□□□□ -1
TCF4-216ENST00000562680 PRDM10Q9NQV6 1147 aa8.81□□□□□ -1
TCF4-216ENST00000562680 MAGEB6P1A0A0J9YX57 407 aa8.81□□□□□ -1
TCF4-216ENST00000562680 GOLGA8AA7E2F4 631 aa8.81□□□□□ -1
TCF4-216ENST00000562680 GOLGA8BA8MQT2 603 aa8.81□□□□□ -1
TCF4-216ENST00000562680 RBM6P78332 1123 aaKnown RBP8.81□□□□□ -1
TCF4-216ENST00000562680 ATP2B2Q01814 1243 aa8.81□□□□□ -1
TCF4-216ENST00000562680 CCDC43Q96MW1 224 aaKnown RBP8.81□□□□□ -1
TCF4-216ENST00000562680 FIBPO43427 364 aa8.8□□□□□ -1
TCF4-216ENST00000562680 MCM4P33991 863 aa8.8□□□□□ -1
TCF4-216ENST00000562680 TRIM28Q13263 835 aaKnown RBP8.8□□□□□ -1
TCF4-216ENST00000562680 SLC4A4Q9Y6R1 1079 aa8.8□□□□□ -1
TCF4-216ENST00000562680 RPS6KA4O75676 772 aa8.8□□□□□ -1
TCF4-216ENST00000562680 LDHBP07195 334 aaKnown RBP8.8□□□□□ -1
TCF4-216ENST00000562680 FOSBP53539 338 aa8.8□□□□□ -1
TCF4-216ENST00000562680 TMEM67Q5HYA8 995 aa8.8□□□□□ -1
TCF4-216ENST00000562680 PXDNLA1KZ92 1463 aa8.8□□□□□ -1
TCF4-216ENST00000562680 SPATA31A1Q5TZJ5 1347 aa8.8□□□□□ -1
TCF4-216ENST00000562680 SGSM2O43147 1006 aa8.8□□□□□ -1
TCF4-216ENST00000562680 C8orf76Q96K31 380 aa8.8□□□□□ -1
TCF4-216ENST00000562680 SEC63Q9UGP8 760 aaKnown RBP8.8□□□□□ -1
TCF4-216ENST00000562680 OLFM4Q6UX06 510 aa8.8□□□□□ -1
TCF4-216ENST00000562680 SMAP1Q8IYB5 467 aaPredicted RBP8.8□□□□□ -1
TCF4-216ENST00000562680 OGFOD1Q8N543 542 aa8.8□□□□□ -1
TCF4-216ENST00000562680 H0YIN7 160 aa8.79□□□□□ -1
TCF4-216ENST00000562680 MRE11P49959 708 aa8.79□□□□□ -1
TCF4-216ENST00000562680 GJD4Q96KN9 370 aaPredicted RBP8.79□□□□□ -1
TCF4-216ENST00000562680 USP26Q9BXU7 913 aa8.79□□□□□ -1
TCF4-216ENST00000562680 SEMA3EO15041 775 aa8.79□□□□□ -1
TCF4-216ENST00000562680 PRPF40AO75400 957 aaKnown RBP8.79□□□□□ -1
TCF4-216ENST00000562680 CALM1P0DP23 149 aa8.79□□□□□ -1
TCF4-216ENST00000562680 CALM2P0DP24 149 aa8.79□□□□□ -1
TCF4-216ENST00000562680 CALM3P0DP25 149 aa8.79□□□□□ -1
TCF4-216ENST00000562680 UBE4AQ14139 1066 aa8.79□□□□□ -1
TCF4-216ENST00000562680 DHX8Q14562 1220 aaKnown RBP8.79□□□□□ -1
TCF4-216ENST00000562680 TMED8Q6PL24 325 aaPredicted RBP8.79□□□□□ -1
TCF4-216ENST00000562680 INTS4Q96HW7 963 aaKnown RBP8.79□□□□□ -1
TCF4-216ENST00000562680 CABP5Q9NP86 173 aa8.79□□□□□ -1
TCF4-216ENST00000562680 TSPY2A6NKD2 308 aa8.79□□□□□ -1
TCF4-216ENST00000562680 H7C1W4 665 aa8.79□□□□□ -1
TCF4-216ENST00000562680 TIMM10P62072 90 aa8.79□□□□□ -1
TCF4-216ENST00000562680 TSR1Q2NL82 804 aaKnown RBP8.79□□□□□ -1
TCF4-216ENST00000562680 SLC27A3Q5K4L6 730 aa8.79□□□□□ -1
TCF4-216ENST00000562680 NLRP10Q86W26 655 aa8.79□□□□□ -1
TCF4-216ENST00000562680 SPATA32Q96LK8 384 aa8.79□□□□□ -1
TCF4-216ENST00000562680 CDHR2Q9BYE9 1310 aa8.79□□□□□ -1
TCF4-216ENST00000562680 POLA2Q14181 598 aa8.79□□□□□ -1
TCF4-216ENST00000562680 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
TCF4-216ENST00000562680 HELBQ8NG08 1087 aaPredicted RBP8.79□□□□□ -1
TCF4-216ENST00000562680 MTMR7Q9Y216 660 aa8.79□□□□□ -1
TCF4-216ENST00000562680 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
TCF4-216ENST00000562680 CREB3L3Q68CJ9 461 aa8.79□□□□□ -1
TCF4-216ENST00000562680 UFL1O94874 794 aa8.78□□□□□ -1
TCF4-216ENST00000562680 ATP2B4P23634 1241 aa8.78□□□□□ -1
TCF4-216ENST00000562680 IARSP41252 1262 aaKnown RBP8.78□□□□□ -1
TCF4-216ENST00000562680 WTAPQ15007 396 aa8.78□□□□□ -1
TCF4-216ENST00000562680 MYOM1P52179 1685 aa8.78□□□□□ -1
TCF4-216ENST00000562680 RTL9Q8NET4 1388 aa8.78□□□□□ -1
TCF4-216ENST00000562680 SPATA31A5Q5VU36 1347 aa8.78□□□□□ -1
TCF4-216ENST00000562680 SPATA31A7Q8IWB4 1347 aa8.78□□□□□ -1
TCF4-216ENST00000562680 ME1P48163 572 aa8.78□□□□□ -1
TCF4-216ENST00000562680 DHX32Q7L7V1 743 aaKnown RBP8.78□□□□□ -1
TCF4-216ENST00000562680 JDP2Q8WYK2 163 aa8.78□□□□□ -1
TCF4-216ENST00000562680 ZSCAN16Q9H4T2 348 aaPredicted RBP8.78□□□□□ -1
TCF4-216ENST00000562680 KAT14Q9H8E8 782 aa8.78□□□□□ -1
TCF4-216ENST00000562680 DACH1Q9UI36 760 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms