RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 KLHDC4Q8TBB5 520 aa20.19■□□□□ 0.82
COMMD4-206ENST00000562610 CNOT7Q9UIV1 285 aaKnown RBP20.19■□□□□ 0.82
COMMD4-206ENST00000562610 POLR2AP24928 1970 aaKnown RBP20.19■□□□□ 0.82
COMMD4-206ENST00000562610 SHTN1A0MZ66 631 aa20.18■□□□□ 0.82
COMMD4-206ENST00000562610 GNAI3P08754 354 aa20.18■□□□□ 0.82
COMMD4-206ENST00000562610 RPS12P25398 132 aaKnown RBP20.18■□□□□ 0.82
COMMD4-206ENST00000562610 COA1Q9GZY4 146 aa20.18■□□□□ 0.82
COMMD4-206ENST00000562610 USP17L3A6NCW0 530 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 USP17L4A6NCW7 530 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 H7C1D1 291 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 MAP1SQ66K74 1059 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-206ENST00000562610 USP17L1Q7RTZ2 530 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 MROH5Q6ZUA9 1318 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 ZNF609O15014 1411 aa20.17■□□□□ 0.82
COMMD4-206ENST00000562610 VIL1P09327 827 aaKnown RBP20.16■□□□□ 0.82
COMMD4-206ENST00000562610 METTL24Q5JXM2 366 aa20.16■□□□□ 0.82
COMMD4-206ENST00000562610 RSBN1LQ6PCB5 846 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-206ENST00000562610 ZNF804AQ7Z570 1209 aa20.16■□□□□ 0.82
COMMD4-206ENST00000562610 TRPM4Q8TD43 1214 aa20.16■□□□□ 0.82
COMMD4-206ENST00000562610 DPF2Q92785 391 aa20.16■□□□□ 0.82
COMMD4-206ENST00000562610 HTRA3P83110 453 aa20.15■□□□□ 0.82
COMMD4-206ENST00000562610 RIPOR2Q9Y4F9 1068 aa20.15■□□□□ 0.82
COMMD4-206ENST00000562610 IRS2Q9Y4H2 1338 aa20.15■□□□□ 0.82
COMMD4-206ENST00000562610 ECM29Q5VYK3 1845 aa20.14■□□□□ 0.81
COMMD4-206ENST00000562610 RFX5P48382 616 aaPredicted RBP20.14■□□□□ 0.81
COMMD4-206ENST00000562610 ITPRIPQ8IWB1 547 aa20.14■□□□□ 0.81
COMMD4-206ENST00000562610 DZIP1LQ8IYY4 767 aaKnown RBP20.14■□□□□ 0.81
COMMD4-206ENST00000562610 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
COMMD4-206ENST00000562610 TBC1D10BQ4KMP7 808 aaPredicted RBP20.13■□□□□ 0.81
COMMD4-206ENST00000562610 C15orf52Q6ZUT6 534 aaKnown RBP20.13■□□□□ 0.81
COMMD4-206ENST00000562610 SAMD7Q7Z3H4 446 aa20.13■□□□□ 0.81
COMMD4-206ENST00000562610 CNTROBQ8N137 903 aa20.13■□□□□ 0.81
COMMD4-206ENST00000562610 AGBL3Q8NEM8 1001 aa20.13■□□□□ 0.81
COMMD4-206ENST00000562610 SIL1Q9H173 461 aa20.13■□□□□ 0.81
COMMD4-206ENST00000562610 PASKQ96RG2 1323 aa20.12■□□□□ 0.81
COMMD4-206ENST00000562610 EYA2O00167 538 aa20.12■□□□□ 0.81
COMMD4-206ENST00000562610 UBE4AQ14139 1066 aa20.12■□□□□ 0.81
COMMD4-206ENST00000562610 STRIP1Q5VSL9 837 aa20.12■□□□□ 0.81
COMMD4-206ENST00000562610 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
COMMD4-206ENST00000562610 MYO3BQ8WXR4 1341 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 GNAI2P04899 355 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 RLBP1P12271 317 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 GTF2IP78347 998 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 DACT2Q5SW24 774 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 RBM26Q5T8P6 1007 aaKnown RBP20.11■□□□□ 0.81
COMMD4-206ENST00000562610 YTHDC1Q96MU7 727 aaKnown RBP20.11■□□□□ 0.81
COMMD4-206ENST00000562610 MXD3Q9BW11 206 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 RCAN3Q9UKA8 241 aa20.11■□□□□ 0.81
COMMD4-206ENST00000562610 CEP350Q5VT06 3117 aa20.1■□□□□ 0.81
COMMD4-206ENST00000562610 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
COMMD4-206ENST00000562610 PDE8BO95263 885 aa20.1■□□□□ 0.81
COMMD4-206ENST00000562610 ITGBL1O95965 494 aaPredicted RBP20.1■□□□□ 0.81
COMMD4-206ENST00000562610 EGFRP00533 1210 aa20.1■□□□□ 0.81
COMMD4-206ENST00000562610 HIRAP54198 1017 aaPredicted RBP20.1■□□□□ 0.81
COMMD4-206ENST00000562610 TTLL5Q6EMB2 1281 aa20.1■□□□□ 0.81
COMMD4-206ENST00000562610 VGLL2Q8N8G2 317 aa20.1■□□□□ 0.81
COMMD4-206ENST00000562610 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
COMMD4-206ENST00000562610 USP17L8P0C7I0 530 aa20.09■□□□□ 0.81
COMMD4-206ENST00000562610 GYG1P46976 350 aa20.09■□□□□ 0.81
COMMD4-206ENST00000562610 GMLQ99445 158 aa20.09■□□□□ 0.81
COMMD4-206ENST00000562610 IL1R1P14778 569 aa20.08■□□□□ 0.81
COMMD4-206ENST00000562610 PUM3Q15397 648 aaKnown RBP20.08■□□□□ 0.81
COMMD4-206ENST00000562610 ATG9AQ7Z3C6 839 aa20.08■□□□□ 0.81
COMMD4-206ENST00000562610 VPS37DQ86XT2 251 aa20.08■□□□□ 0.81
COMMD4-206ENST00000562610 PANK1Q8TE04 598 aa20.08■□□□□ 0.81
COMMD4-206ENST00000562610 JAG2Q9Y219 1238 aa20.08■□□□□ 0.81
COMMD4-206ENST00000562610 CIAO1O76071 339 aa20.07■□□□□ 0.8
COMMD4-206ENST00000562610 HIBADHP31937 336 aaKnown RBP20.07■□□□□ 0.8
COMMD4-206ENST00000562610 MTX1Q13505 466 aa20.07■□□□□ 0.8
COMMD4-206ENST00000562610 ZC3H15Q8WU90 426 aaKnown RBP20.07■□□□□ 0.8
COMMD4-206ENST00000562610 C1orf115Q9H7X2 142 aa20.07■□□□□ 0.8
COMMD4-206ENST00000562610 MYOZ2Q9NPC6 264 aa20.07■□□□□ 0.8
COMMD4-206ENST00000562610 FBXO3Q9UK99 471 aa20.07■□□□□ 0.8
COMMD4-206ENST00000562610 TRAF5O00463 557 aa20.06■□□□□ 0.8
COMMD4-206ENST00000562610 IFIT1P09914 478 aaKnown RBP20.06■□□□□ 0.8
COMMD4-206ENST00000562610 MS4A1P11836 297 aa20.06■□□□□ 0.8
COMMD4-206ENST00000562610 ZNF280AP59817 542 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-206ENST00000562610 CAVIN4Q5BKX8 364 aa20.06■□□□□ 0.8
COMMD4-206ENST00000562610 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
COMMD4-206ENST00000562610 OGFOD1Q8N543 542 aa20.06■□□□□ 0.8
COMMD4-206ENST00000562610 FAM84BQ96KN1 310 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-206ENST00000562610 GLIS2Q9BZE0 524 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-206ENST00000562610 COPRSQ9NQ92 184 aa20.06■□□□□ 0.8
COMMD4-206ENST00000562610 CREBZFQ9NS37 354 aa20.06■□□□□ 0.8
COMMD4-206ENST00000562610 TMEM88BA6NKF7 163 aa20.05■□□□□ 0.8
COMMD4-206ENST00000562610 SLC5A1P13866 664 aa20.05■□□□□ 0.8
COMMD4-206ENST00000562610 IL15P40933 162 aaPredicted RBP20.05■□□□□ 0.8
COMMD4-206ENST00000562610 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
COMMD4-206ENST00000562610 GGA3Q9NZ52 723 aa20.05■□□□□ 0.8
COMMD4-206ENST00000562610 CEP126Q9P2H0 1117 aa20.05■□□□□ 0.8
COMMD4-206ENST00000562610 IQSEC3Q9UPP2 1182 aaPredicted RBP20.05■□□□□ 0.8
COMMD4-206ENST00000562610 PNMA6EA0A0J9YXQ4 647 aa20.04■□□□□ 0.8
COMMD4-206ENST00000562610 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
COMMD4-206ENST00000562610 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
COMMD4-206ENST00000562610 PGAP2Q9UHJ9 254 aa20.04■□□□□ 0.8
COMMD4-206ENST00000562610 HDAC9Q9UKV0 1011 aa20.04■□□□□ 0.8
COMMD4-206ENST00000562610 F8W031 263 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms