RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PTPRUQ92729 1446 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 NHSL1Q5SYE7 1610 aa8.62□□□□□ -1.03
UBR1-203ENST00000562173 AFF2P51816 1311 aa8.62□□□□□ -1.03
UBR1-203ENST00000562173 BRWD3Q6RI45 1802 aa8.62□□□□□ -1.03
UBR1-203ENST00000562173 NPR3P17342 541 aa8.62□□□□□ -1.03
UBR1-203ENST00000562173 MEX3CQ5U5Q3 659 aaKnown RBP8.62□□□□□ -1.03
UBR1-203ENST00000562173 HSH2DQ96JZ2 352 aa8.62□□□□□ -1.03
UBR1-203ENST00000562173 SAP130Q9H0E3 1048 aa8.62□□□□□ -1.03
UBR1-203ENST00000562173 DNMT3AQ9Y6K1 912 aaPredicted RBP8.62□□□□□ -1.03
UBR1-203ENST00000562173 EFSO43281 561 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 SLURP2P0DP57 97 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 TYRO3Q06418 890 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 LRRC69Q6ZNQ3 347 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 CFHR5Q9BXR6 569 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 NDFIP2Q9NV92 336 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 TMEM131LA2VDJ0 1609 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 NRXN3Q9Y4C0 1643 aa8.61□□□□□ -1.03
UBR1-203ENST00000562173 NALCNQ8IZF0 1738 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 NKTRP30414 1462 aaKnown RBP8.6□□□□□ -1.03
UBR1-203ENST00000562173 ATXN7O15265 892 aaPredicted RBP8.6□□□□□ -1.03
UBR1-203ENST00000562173 ICMTO60725 284 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 FAM13AO94988 1023 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 EPB42P16452 691 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 SERPINB4P48594 390 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 NAA30Q147X3 362 aaPredicted RBP8.6□□□□□ -1.03
UBR1-203ENST00000562173 ZNF385CQ66K41 422 aaPredicted RBP8.6□□□□□ -1.03
UBR1-203ENST00000562173 ALKBH2Q6NS38 261 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 WHAMMQ8TF30 809 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 ZCCHC2Q9C0B9 1178 aaKnown RBP8.6□□□□□ -1.03
UBR1-203ENST00000562173 C11orf16Q9NQ32 467 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 ABCC5O15440 1437 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 ZFYVE9O95405 1425 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 MSH6P52701 1360 aa8.6□□□□□ -1.03
UBR1-203ENST00000562173 DUOX2Q9NRD8 1548 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 LRRC9Q6ZRR7 1453 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 SCNN1AP37088 669 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 KCNQ4P56696 695 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 FKBP4Q02790 459 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR1-203ENST00000562173 GTPBP3Q969Y2 492 aaKnown RBP8.59□□□□□ -1.03
UBR1-203ENST00000562173 DMGDHQ9UI17 866 aaKnown RBP8.59□□□□□ -1.03
UBR1-203ENST00000562173 BCS1LQ9Y276 419 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 EP400Q96L91 3159 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 ADAMTS13Q76LX8 1427 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 KIF15Q9NS87 1388 aa8.59□□□□□ -1.03
UBR1-203ENST00000562173 H3BRB1 525 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 ABL1P00519 1130 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 RXRBP28702 533 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 ARSDP51689 593 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 FAM182BQ5T319 152 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 BRINP3Q76B58 766 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 ZNF280CQ8ND82 737 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 TUT1Q9H6E5 874 aaKnown RBP8.58□□□□□ -1.04
UBR1-203ENST00000562173 E9PCH4 1651 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 ASXL1Q8IXJ9 1541 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 PTPN23Q9H3S7 1636 aa8.58□□□□□ -1.04
UBR1-203ENST00000562173 NOS1P29475 1434 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 ARHGAP31Q2M1Z3 1444 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 RIMS2Q9UQ26 1411 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 SOWAHDA6NJG2 315 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 GPR25O00155 361 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 IDH3AP50213 366 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 TNP2Q05952 138 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 ZNF211Q13398 564 aaPredicted RBP8.57□□□□□ -1.04
UBR1-203ENST00000562173 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 ETFBKMTQ8IXQ9 262 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 CEP63Q96MT8 703 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 C8orf37Q96NL8 207 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 BRD7Q9NPI1 651 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 EID1Q9Y6B2 187 aa8.57□□□□□ -1.04
UBR1-203ENST00000562173 MICAL2O94851 1124 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 TSPY4P0CV99 314 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 TSPY10P0CW01 314 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 INPP5BP32019 993 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 KLRG1Q96E93 195 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 XRN1Q8IZH2 1706 aaKnown RBP8.56□□□□□ -1.04
UBR1-203ENST00000562173 UNC13BO14795 1591 aa8.56□□□□□ -1.04
UBR1-203ENST00000562173 DCDC2BA2VCK2 349 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 BNIP3LO60238 219 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 MAPTP10636 758 aaKnown RBP8.55□□□□□ -1.04
UBR1-203ENST00000562173 FGFR3P22607 806 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 MPSTP25325 297 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 ZAP70P43403 619 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 GSK3AP49840 483 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
UBR1-203ENST00000562173 NOM1Q5C9Z4 860 aaKnown RBP8.55□□□□□ -1.04
UBR1-203ENST00000562173 ABHD17AQ96GS6 310 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 NSFL1CQ9UNZ2 370 aaKnown RBP8.55□□□□□ -1.04
UBR1-203ENST00000562173 ADAMTS8Q9UP79 889 aa8.55□□□□□ -1.04
UBR1-203ENST00000562173 MST1RQ04912 1400 aa8.54□□□□□ -1.04
UBR1-203ENST00000562173 PNPLA6Q8IY17 1366 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms