RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.28
ITGAM-203ENST00000561838 MYD88Q99836 296 aa16.77■□□□□ 0.28
ITGAM-203ENST00000561838 BSDC1Q9NW68 430 aaPredicted RBP16.77■□□□□ 0.28
ITGAM-203ENST00000561838 UNCXA6NJT0 531 aa16.76■□□□□ 0.27
ITGAM-203ENST00000561838 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
ITGAM-203ENST00000561838 COA1Q9GZY4 146 aa16.76■□□□□ 0.27
ITGAM-203ENST00000561838 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
ITGAM-203ENST00000561838 WNT10BO00744 389 aa16.75■□□□□ 0.27
ITGAM-203ENST00000561838 NBPF9Q3BBW0 867 aa16.75■□□□□ 0.27
ITGAM-203ENST00000561838 DACT2Q5SW24 774 aa16.75■□□□□ 0.27
ITGAM-203ENST00000561838 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
ITGAM-203ENST00000561838 METTL22Q9BUU2 404 aaPredicted RBP16.75■□□□□ 0.27
ITGAM-203ENST00000561838 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
ITGAM-203ENST00000561838 GNAI1P63096 354 aa16.74■□□□□ 0.27
ITGAM-203ENST00000561838 MOB2Q70IA6 237 aa16.74■□□□□ 0.27
ITGAM-203ENST00000561838 IFT57Q9NWB7 429 aa16.74■□□□□ 0.27
ITGAM-203ENST00000561838 LEMD3Q9Y2U8 911 aa16.74■□□□□ 0.27
ITGAM-203ENST00000561838 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
ITGAM-203ENST00000561838 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
ITGAM-203ENST00000561838 ZNF853P0CG23 659 aa16.73■□□□□ 0.27
ITGAM-203ENST00000561838 CCT4P50991 539 aaKnown RBP16.73■□□□□ 0.27
ITGAM-203ENST00000561838 CTSWP56202 376 aa16.73■□□□□ 0.27
ITGAM-203ENST00000561838 LDLRAD1Q5T700 205 aa16.73■□□□□ 0.27
ITGAM-203ENST00000561838 PHAXQ9H814 394 aaKnown RBP16.73■□□□□ 0.27
ITGAM-203ENST00000561838 MINPP1Q9UNW1 487 aa16.73■□□□□ 0.27
ITGAM-203ENST00000561838 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
ITGAM-203ENST00000561838 NEXNQ0ZGT2 675 aa16.72■□□□□ 0.27
ITGAM-203ENST00000561838 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
ITGAM-203ENST00000561838 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
ITGAM-203ENST00000561838 ANKRD2Q9GZV1 360 aa16.72■□□□□ 0.27
ITGAM-203ENST00000561838 ZBTB48P10074 688 aaPredicted RBP16.71■□□□□ 0.27
ITGAM-203ENST00000561838 PRAMEF18Q5VWM3 479 aa16.71■□□□□ 0.27
ITGAM-203ENST00000561838 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
ITGAM-203ENST00000561838 TTLL11Q8NHH1 800 aa16.71■□□□□ 0.27
ITGAM-203ENST00000561838 CCDC85AQ96PX6 553 aaPredicted RBP16.71■□□□□ 0.27
ITGAM-203ENST00000561838 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.27
ITGAM-203ENST00000561838 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
ITGAM-203ENST00000561838 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
ITGAM-203ENST00000561838 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
ITGAM-203ENST00000561838 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
ITGAM-203ENST00000561838 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
ITGAM-203ENST00000561838 MYH3P11055 1940 aa16.7■□□□□ 0.26
ITGAM-203ENST00000561838 KSR2Q6VAB6 950 aa16.69■□□□□ 0.26
ITGAM-203ENST00000561838 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
ITGAM-203ENST00000561838 ZBED3Q96IU2 234 aaPredicted RBP16.69■□□□□ 0.26
ITGAM-203ENST00000561838 ANGEL1Q9UNK9 670 aaKnown RBP16.69■□□□□ 0.26
ITGAM-203ENST00000561838 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
ITGAM-203ENST00000561838 MKRN3Q13064 507 aaKnown RBP16.68■□□□□ 0.26
ITGAM-203ENST00000561838 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
ITGAM-203ENST00000561838 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
ITGAM-203ENST00000561838 MTMR14Q8NCE2 650 aa16.68■□□□□ 0.26
ITGAM-203ENST00000561838 ERO1AQ96HE7 468 aa16.68■□□□□ 0.26
ITGAM-203ENST00000561838 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
ITGAM-203ENST00000561838 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
ITGAM-203ENST00000561838 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
ITGAM-203ENST00000561838 MYO1BO43795 1136 aa16.67■□□□□ 0.26
ITGAM-203ENST00000561838 SASH1O94885 1247 aa16.67■□□□□ 0.26
ITGAM-203ENST00000561838 DLGAP5Q15398 846 aa16.67■□□□□ 0.26
ITGAM-203ENST00000561838 DEFB129Q9H1M3 183 aa16.67■□□□□ 0.26
ITGAM-203ENST00000561838 GREM2Q9H772 168 aa16.67■□□□□ 0.26
ITGAM-203ENST00000561838 TRIM17Q9Y577 477 aa16.67■□□□□ 0.26
ITGAM-203ENST00000561838 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
ITGAM-203ENST00000561838 ELL2O00472 640 aaPredicted RBP16.66■□□□□ 0.26
ITGAM-203ENST00000561838 ARHGEF6Q15052 776 aa16.66■□□□□ 0.26
ITGAM-203ENST00000561838 KIAA0825Q8IV33 1275 aa16.66■□□□□ 0.26
ITGAM-203ENST00000561838 JARID2Q92833 1246 aaPredicted RBP16.66■□□□□ 0.26
ITGAM-203ENST00000561838 MPHOSPH8Q99549 860 aa16.66■□□□□ 0.26
ITGAM-203ENST00000561838 MXD3Q9BW11 206 aa16.66■□□□□ 0.26
ITGAM-203ENST00000561838 LAMB1P07942 1786 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 PI4KAP2A4QPH2 592 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 IGKV5-2P06315 115 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 PRKG1Q13976 671 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
ITGAM-203ENST00000561838 OTOP1Q7RTM1 612 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 PLA2G12BQ9BX93 195 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 STK31Q9BXU1 1019 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 R3HDMLQ9H3Y0 253 aa16.65■□□□□ 0.26
ITGAM-203ENST00000561838 H7C1W4 665 aa16.64■□□□□ 0.25
ITGAM-203ENST00000561838 KCNJ4P48050 445 aa16.64■□□□□ 0.25
ITGAM-203ENST00000561838 IREB2P48200 963 aaKnown RBP16.64■□□□□ 0.25
ITGAM-203ENST00000561838 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
ITGAM-203ENST00000561838 GTF2IP78347 998 aa16.64■□□□□ 0.25
ITGAM-203ENST00000561838 WNK4Q96J92 1243 aa16.64■□□□□ 0.25
ITGAM-203ENST00000561838 RBBP6Q7Z6E9 1792 aaKnown RBP16.64■□□□□ 0.25
ITGAM-203ENST00000561838 WTIPA6NIX2 430 aaPredicted RBP16.63■□□□□ 0.25
ITGAM-203ENST00000561838 NEURL1BA8MQ27 555 aa16.63■□□□□ 0.25
ITGAM-203ENST00000561838 C15orf52Q6ZUT6 534 aaKnown RBP16.63■□□□□ 0.25
ITGAM-203ENST00000561838 TXNRD3Q86VQ6 643 aa16.63■□□□□ 0.25
ITGAM-203ENST00000561838 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
ITGAM-203ENST00000561838 ARMC5Q96C12 935 aa16.63■□□□□ 0.25
ITGAM-203ENST00000561838 CD209Q9NNX6 404 aa16.63■□□□□ 0.25
ITGAM-203ENST00000561838 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
ITGAM-203ENST00000561838 ECM29Q5VYK3 1845 aa16.62■□□□□ 0.25
ITGAM-203ENST00000561838 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
ITGAM-203ENST00000561838 ITGA6P23229 1130 aa16.62■□□□□ 0.25
ITGAM-203ENST00000561838 MYH16Q9H6N6 1097 aa16.62■□□□□ 0.25
ITGAM-203ENST00000561838 EFCC1Q9HA90 598 aa16.62■□□□□ 0.25
ITGAM-203ENST00000561838 TESPA1A2RU30 521 aaPredicted RBP16.61■□□□□ 0.25
ITGAM-203ENST00000561838 APAF1O14727 1248 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms