RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 NUP98P52948 1817 aa8.05□□□□□ -1.12
CAPN3-210ENST00000561817 TAF1LQ8IZX4 1826 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 ERVV-1B6SEH8 477 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 MX1P20591 662 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 CRKLP46109 303 aaKnown RBP8.04□□□□□ -1.12
CAPN3-210ENST00000561817 PTPN12Q05209 780 aaKnown RBP8.04□□□□□ -1.12
CAPN3-210ENST00000561817 TSR1Q2NL82 804 aaKnown RBP8.04□□□□□ -1.12
CAPN3-210ENST00000561817 HSP90AB4PQ58FF6 505 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 PI4K2BQ8TCG2 481 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 ZC3H15Q8WU90 426 aaKnown RBP8.04□□□□□ -1.12
CAPN3-210ENST00000561817 PLA2G12BQ9BX93 195 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 IL1RAPL2Q9NP60 686 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 CCDC87Q9NVE4 849 aa8.04□□□□□ -1.12
CAPN3-210ENST00000561817 CDC45O75419 566 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 PCCAP05165 728 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-210ENST00000561817 BAG6P46379 1132 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 RBM25P49756 843 aaKnown RBP8.03□□□□□ -1.12
CAPN3-210ENST00000561817 TSHZ3Q63HK5 1081 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 KIF6Q6ZMV9 814 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 DEFB132Q7Z7B7 95 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 NLRP10Q86W26 655 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 ZNF34Q8IZ26 560 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-210ENST00000561817 EP400Q96L91 3159 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 CDHR2Q9BYE9 1310 aa8.03□□□□□ -1.12
CAPN3-210ENST00000561817 BCORQ6W2J9 1755 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 GRXCR2A6NFK2 248 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 CAMTA2O94983 1202 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 ITGBL1O95965 494 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-210ENST00000561817 APBA3O96018 575 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 CSF1RP07333 972 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 ATP6V1AP38606 617 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 LMBR1LQ6UX01 489 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 NUTM1Q86Y26 1132 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 ERC1Q8IUD2 1116 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 ZBTB38Q8NAP3 1195 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-210ENST00000561817 LINC00116Q8NCU8 138 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 KLHDC4Q8TBB5 520 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 LRCH3Q96II8 777 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 KIF2CQ99661 725 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 TSKSQ9UJT2 592 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 MTMR7Q9Y216 660 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 UBN2Q6ZU65 1347 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 CNTNAP4Q9C0A0 1308 aa8.02□□□□□ -1.13
CAPN3-210ENST00000561817 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
CAPN3-210ENST00000561817 HSP90AB3PQ58FF7 597 aa8.01□□□□□ -1.13
CAPN3-210ENST00000561817 RC3H1Q5TC82 1133 aaKnown RBP8.01□□□□□ -1.13
CAPN3-210ENST00000561817 ATG9AQ7Z3C6 839 aa8.01□□□□□ -1.13
CAPN3-210ENST00000561817 DZIP3Q86Y13 1208 aaKnown RBP8.01□□□□□ -1.13
CAPN3-210ENST00000561817 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
CAPN3-210ENST00000561817 EAF2Q96CJ1 260 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-210ENST00000561817 TRAIPQ9BWF2 469 aa8.01□□□□□ -1.13
CAPN3-210ENST00000561817 C22orf23Q9BZE7 217 aa8.01□□□□□ -1.13
CAPN3-210ENST00000561817 TSR3Q9UJK0 312 aaKnown RBP8.01□□□□□ -1.13
CAPN3-210ENST00000561817 TBC1D2BQ9UPU7 963 aa8.01□□□□□ -1.13
CAPN3-210ENST00000561817 TTC41PQ6P2S7 1318 aa8.01□□□□□ -1.13
CAPN3-210ENST00000561817 BRD2P25440 801 aaKnown RBP8□□□□□ -1.13
CAPN3-210ENST00000561817 PRSS12P56730 875 aa8□□□□□ -1.13
CAPN3-210ENST00000561817 G3BP1Q13283 466 aaKnown RBP eCLIP8□□□□□ -1.13
CAPN3-210ENST00000561817 DDRGK1Q96HY6 314 aa8□□□□□ -1.13
CAPN3-210ENST00000561817 LRP5O75197 1615 aa8□□□□□ -1.13
CAPN3-210ENST00000561817 SCN7AQ01118 1682 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 CIAO1O76071 339 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 GPTP24298 496 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 CHMLP26374 656 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 EZH2Q15910 746 aaKnown RBP7.99□□□□□ -1.13
CAPN3-210ENST00000561817 CLASRPQ8N2M8 674 aaKnown RBP7.99□□□□□ -1.13
CAPN3-210ENST00000561817 FAM89AQ96GI7 184 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 USP26Q9BXU7 913 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 SIL1Q9H173 461 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 GPR108Q9NPR9 543 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 ECHDC1Q9NTX5 307 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 TLR7Q9NYK1 1049 aaKnown RBP7.99□□□□□ -1.13
CAPN3-210ENST00000561817 HPS5Q9UPZ3 1129 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 ZNF330Q9Y3S2 320 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-210ENST00000561817 MYH3P11055 1940 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 LAMB2P55268 1798 aa7.99□□□□□ -1.13
CAPN3-210ENST00000561817 DDX60Q8IY21 1712 aaKnown RBP7.98□□□□□ -1.13
CAPN3-210ENST00000561817 EYA2O00167 538 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 GLRX3O76003 335 aaKnown RBP7.98□□□□□ -1.13
CAPN3-210ENST00000561817 KCNQ4P56696 695 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 TFCP2Q12800 502 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 OS9Q13438 667 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-210ENST00000561817 TNNI3KQ59H18 835 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-210ENST00000561817 SUSD4Q5VX71 490 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 AACSQ86V21 672 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 AMIGO3Q86WK7 504 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 TTLL11Q8NHH1 800 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 IL17RAQ96F46 866 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 ESYT1Q9BSJ8 1104 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 BCL11AQ9H165 835 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 IL25Q9H293 177 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 UPF2Q9HAU5 1272 aaKnown RBP7.98□□□□□ -1.13
CAPN3-210ENST00000561817 DBNLQ9UJU6 430 aaKnown RBP7.98□□□□□ -1.13
CAPN3-210ENST00000561817 FPGT-TNNI3KV9GXZ4 949 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 C4BP0C0L5 1744 aa7.98□□□□□ -1.13
CAPN3-210ENST00000561817 AK9Q5TCS8 1911 aa7.97□□□□□ -1.13
CAPN3-210ENST00000561817 RIC1Q4ADV7 1423 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms