RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 TTC36A6NLP5 189 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 AP5Z1O43299 807 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 CLSTN1O94985 981 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 IRX1P78414 480 aaPredicted RBP8.49□□□□□ -1.05
CDH1-203ENST00000561751 DDR1Q08345 913 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 FUT2Q10981 343 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 ELF2Q15723 593 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 MORN1Q5T089 497 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 REXO1L1PQ8IX06 675 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 CCAR2Q8N163 923 aaKnown RBP8.49□□□□□ -1.05
CDH1-203ENST00000561751 RDH13Q8NBN7 331 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 SSH1Q8WYL5 1049 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 UBXN4Q92575 508 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 DDX19AQ9NUU7 478 aaKnown RBP8.49□□□□□ -1.05
CDH1-203ENST00000561751 ORC3Q9UBD5 711 aaPredicted RBP8.49□□□□□ -1.05
CDH1-203ENST00000561751 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDH1-203ENST00000561751 ZC3H13Q5T200 1668 aaKnown RBP8.49□□□□□ -1.05
CDH1-203ENST00000561751 UNC13BO14795 1591 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 ANKRD33BA6NCL7 494 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 EIF3CLB5ME19 914 aaKnown RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 ZSCAN22P10073 491 aaPredicted RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 TUBB2AQ13885 445 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 SMC1AQ14683 1233 aaKnown RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 BRD3Q15059 726 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 MAP3K11Q16584 847 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 LRCH2Q5VUJ6 765 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 RPAP2Q8IXW5 612 aaPredicted RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 THEMISQ8N1K5 641 aaPredicted RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 CACTINQ8WUQ7 758 aaKnown RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 SMARCE1Q969G3 411 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 EIF3CQ99613 913 aaKnown RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 SPSB2Q99619 263 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 PLCD4Q9BRC7 762 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 TUBB2BQ9BVA1 445 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 ADAM21Q9UKJ8 722 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 NOB1Q9ULX3 412 aaKnown RBP8.48□□□□□ -1.05
CDH1-203ENST00000561751 TNNQ9UQP3 1299 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 ABCC3O15438 1527 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 TTC41PQ6P2S7 1318 aa8.48□□□□□ -1.05
CDH1-203ENST00000561751 A6NNZ2 444 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 GOLIM4O00461 696 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 MAP2K7O14733 419 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 TRIM66O15016 1216 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 CTAGE5O15320 804 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
CDH1-203ENST00000561751 GSPT1P15170 499 aaKnown RBP8.47□□□□□ -1.05
CDH1-203ENST00000561751 IDI1Q13907 227 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 TSGA10IPQ3SY00 556 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 TUBB8Q3ZCM7 444 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 ZNF697Q5TEC3 545 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 DDX11Q96FC9 970 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 PSMD1Q99460 953 aa8.47□□□□□ -1.05
CDH1-203ENST00000561751 OSBPL5Q9H0X9 879 aaPredicted RBP8.47□□□□□ -1.05
CDH1-203ENST00000561751 ATXN2Q99700 1313 aaKnown RBP8.47□□□□□ -1.05
CDH1-203ENST00000561751 CCDC151A5D8V7 595 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 GDF9O60383 454 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 EIF3JO75822 258 aaKnown RBP8.46□□□□□ -1.06
CDH1-203ENST00000561751 SKILP12757 684 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 CASTP20810 708 aaKnown RBP8.46□□□□□ -1.06
CDH1-203ENST00000561751 GCGRP47871 477 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 NEK4P51957 841 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 PRR20EP86478 221 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 PRR20CP86479 221 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 PRR20DP86480 221 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 PRR20BP86481 221 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 PRR20AP86496 221 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 NAA30Q147X3 362 aaPredicted RBP8.46□□□□□ -1.06
CDH1-203ENST00000561751 LRRFIP1Q32MZ4 808 aaKnown RBP8.46□□□□□ -1.06
CDH1-203ENST00000561751 CCDC30Q5VVM6 783 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 TTLL5Q6EMB2 1281 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 FMNL3Q8IVF7 1028 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 DRC7Q8IY82 874 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 NEK11Q8NG66 645 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 DNAAF4Q8WXU2 420 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
CDH1-203ENST00000561751 DRC1Q96MC2 740 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 TRIM5Q9C035 493 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 ARFGAP3Q9NP61 516 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 CLIP2Q9UDT6 1046 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 LCMT1Q9UIC8 334 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 TTC21BQ7Z4L5 1316 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 MROH1Q8NDA8 1641 aa8.46□□□□□ -1.06
CDH1-203ENST00000561751 IQGAP3Q86VI3 1631 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 GOLGA6L9A6NEM1 432 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 PPFIA4O75335 1185 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 SMC2O95347 1197 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 TBC1D8O95759 1140 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 OAS2P29728 719 aaKnown RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 SRPK2P78362 688 aaKnown RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 EXOSC9Q06265 439 aaKnown RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 TYRO3Q06418 890 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 SNW1Q13573 536 aaKnown RBP8.45□□□□□ -1.06
CDH1-203ENST00000561751 ERCC6LQ2NKX8 1250 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 ARHGAP29Q52LW3 1261 aa8.45□□□□□ -1.06
CDH1-203ENST00000561751 DNAJC21Q5F1R6 531 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms