RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 ZNF408Q9H9D4 720 aa17.12■□□□□ 0.33
USB1-205ENST00000561743 C9orf78Q9NZ63 289 aaPredicted RBP17.12■□□□□ 0.33
USB1-205ENST00000561743 CHMP3Q9Y3E7 222 aa17.12■□□□□ 0.33
USB1-205ENST00000561743 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 FOXN1O15353 648 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 CYP4F22Q6NT55 531 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 DLK2Q6UY11 383 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 KRT26Q7Z3Y9 468 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 CDCA7LQ96GN5 454 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 CAPNS2Q96L46 248 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
USB1-205ENST00000561743 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
USB1-205ENST00000561743 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
USB1-205ENST00000561743 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
USB1-205ENST00000561743 WBP1LQ9NX94 342 aa17.1■□□□□ 0.33
USB1-205ENST00000561743 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
USB1-205ENST00000561743 ASTN2O75129 1339 aaPredicted RBP17.1■□□□□ 0.33
USB1-205ENST00000561743 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
USB1-205ENST00000561743 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 ECE1P42892 770 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
USB1-205ENST00000561743 KAZALD1Q96I82 304 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 SUCLG2Q96I99 432 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 MXD3Q9BW11 206 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 UTYO14607 1347 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 PTPRCP08575 1304 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
USB1-205ENST00000561743 SNAP23O00161 211 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 TAF5LO75529 589 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 KCNJ4P48050 445 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 GRM1Q13255 1194 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 CCDC57Q2TAC2 916 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.32
USB1-205ENST00000561743 HELBQ8NG08 1087 aaPredicted RBP17.08■□□□□ 0.32
USB1-205ENST00000561743 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 ZNF594Q96JF6 807 aaPredicted RBP17.08■□□□□ 0.32
USB1-205ENST00000561743 HHIPL1Q96JK4 782 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
USB1-205ENST00000561743 ECM29Q5VYK3 1845 aa17.07■□□□□ 0.32
USB1-205ENST00000561743 MYO3BQ8WXR4 1341 aa17.07■□□□□ 0.32
USB1-205ENST00000561743 SCARF1Q14162 830 aa17.07■□□□□ 0.32
USB1-205ENST00000561743 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
USB1-205ENST00000561743 FBXW7Q969H0 707 aa17.07■□□□□ 0.32
USB1-205ENST00000561743 MAP2K1Q02750 393 aaPredicted RBP17.06■□□□□ 0.32
USB1-205ENST00000561743 ANGEL2Q5VTE6 544 aaKnown RBP17.06■□□□□ 0.32
USB1-205ENST00000561743 LDHAL6AQ6ZMR3 332 aa17.06■□□□□ 0.32
USB1-205ENST00000561743 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
USB1-205ENST00000561743 SULF1Q8IWU6 871 aa17.06■□□□□ 0.32
USB1-205ENST00000561743 TNS4Q8IZW8 715 aa17.06■□□□□ 0.32
USB1-205ENST00000561743 ARAP2Q8WZ64 1704 aa17.05■□□□□ 0.32
USB1-205ENST00000561743 AOC2O75106 756 aa17.05■□□□□ 0.32
USB1-205ENST00000561743 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
USB1-205ENST00000561743 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
USB1-205ENST00000561743 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
USB1-205ENST00000561743 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
USB1-205ENST00000561743 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
USB1-205ENST00000561743 PITPNM2Q9BZ72 1349 aa17.04■□□□□ 0.32
USB1-205ENST00000561743 GTF2IP78347 998 aa17.04■□□□□ 0.32
USB1-205ENST00000561743 RABL6Q3YEC7 729 aaPredicted RBP17.04■□□□□ 0.32
USB1-205ENST00000561743 BICC1Q9H694 974 aaKnown RBP17.04■□□□□ 0.32
USB1-205ENST00000561743 GBA2Q9HCG7 927 aaPredicted RBP17.04■□□□□ 0.32
USB1-205ENST00000561743 CNNM1Q9NRU3 951 aa17.04■□□□□ 0.32
USB1-205ENST00000561743 PAPPA2Q9BXP8 1791 aa17.04■□□□□ 0.32
USB1-205ENST00000561743 MAP2K2P36507 400 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 HUNKP57058 714 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 OGFOD1Q8N543 542 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
USB1-205ENST00000561743 WNT10BO00744 389 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 PLIN1O60240 522 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 HSPA8P11142 646 aaKnown RBP17.02■□□□□ 0.32
USB1-205ENST00000561743 IL1R1P14778 569 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 LBX1P52954 281 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 ZNF804AQ7Z570 1209 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
USB1-205ENST00000561743 USP44Q9H0E7 712 aa17.02■□□□□ 0.32
USB1-205ENST00000561743 SCAF8Q9UPN6 1271 aaKnown RBP17.02■□□□□ 0.32
USB1-205ENST00000561743 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
USB1-205ENST00000561743 CERS5Q8N5B7 392 aa17.01■□□□□ 0.31
USB1-205ENST00000561743 SASH1O94885 1247 aa17■□□□□ 0.31
USB1-205ENST00000561743 MMP14P50281 582 aa17■□□□□ 0.31
USB1-205ENST00000561743 RIPOR2Q9Y4F9 1068 aa17■□□□□ 0.31
USB1-205ENST00000561743 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
USB1-205ENST00000561743 UBE4AQ14139 1066 aa16.99■□□□□ 0.31
USB1-205ENST00000561743 RGMBQ6NW40 437 aa16.99■□□□□ 0.31
USB1-205ENST00000561743 ZBED3Q96IU2 234 aaPredicted RBP16.99■□□□□ 0.31
USB1-205ENST00000561743 BEGAINQ9BUH8 593 aa16.99■□□□□ 0.31
USB1-205ENST00000561743 HDAC9Q9UKV0 1011 aa16.99■□□□□ 0.31
USB1-205ENST00000561743 AKAP11Q9UKA4 1901 aa16.99■□□□□ 0.31
USB1-205ENST00000561743 MYH13Q9UKX3 1938 aa16.99■□□□□ 0.31
USB1-205ENST00000561743 MROH5Q6ZUA9 1318 aa16.98■□□□□ 0.31
USB1-205ENST00000561743 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
USB1-205ENST00000561743 NOGQ13253 232 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms