RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ANKRD18AQ8IVF6 992 aa23.65■■□□□ 1.38
COMMD4-204ENST00000561662 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
COMMD4-204ENST00000561662 TRIM17Q9Y577 477 aa23.65■■□□□ 1.38
COMMD4-204ENST00000561662 BRCA2P51587 3418 aa23.64■■□□□ 1.38
COMMD4-204ENST00000561662 ATP2B4P23634 1241 aa23.64■■□□□ 1.37
COMMD4-204ENST00000561662 GOLGA2Q08379 1002 aa23.63■■□□□ 1.37
COMMD4-204ENST00000561662 NOM1Q5C9Z4 860 aaKnown RBP23.63■■□□□ 1.37
COMMD4-204ENST00000561662 DACT2Q5SW24 774 aa23.63■■□□□ 1.37
COMMD4-204ENST00000561662 PDE8AO60658 829 aa23.62■■□□□ 1.37
COMMD4-204ENST00000561662 ARMC9Q7Z3E5 817 aa23.62■■□□□ 1.37
COMMD4-204ENST00000561662 OGFOD1Q8N543 542 aa23.62■■□□□ 1.37
COMMD4-204ENST00000561662 ANGEL1Q9UNK9 670 aaKnown RBP23.62■■□□□ 1.37
COMMD4-204ENST00000561662 PCCAP05165 728 aaPredicted RBP23.61■■□□□ 1.37
COMMD4-204ENST00000561662 HOXB7P09629 217 aa23.61■■□□□ 1.37
COMMD4-204ENST00000561662 SPRYD7Q5W111 196 aa23.61■■□□□ 1.37
COMMD4-204ENST00000561662 ELL2O00472 640 aaPredicted RBP23.6■■□□□ 1.37
COMMD4-204ENST00000561662 OTOP1Q7RTM1 612 aa23.6■■□□□ 1.37
COMMD4-204ENST00000561662 HSP90B1P14625 803 aaKnown RBP23.59■■□□□ 1.37
COMMD4-204ENST00000561662 TXNRD3Q86VQ6 643 aa23.59■■□□□ 1.37
COMMD4-204ENST00000561662 CFHR5Q9BXR6 569 aa23.59■■□□□ 1.37
COMMD4-204ENST00000561662 CWC25Q9NXE8 425 aaPredicted RBP23.59■■□□□ 1.37
COMMD4-204ENST00000561662 MED23Q9ULK4 1368 aa23.58■■□□□ 1.37
COMMD4-204ENST00000561662 KIAA0825Q8IV33 1275 aa23.58■■□□□ 1.37
COMMD4-204ENST00000561662 CCDC191Q8NCU4 936 aa23.58■■□□□ 1.37
COMMD4-204ENST00000561662 CLMNQ96JQ2 1002 aa23.58■■□□□ 1.37
COMMD4-204ENST00000561662 MBIPQ9NS73 344 aa23.58■■□□□ 1.37
COMMD4-204ENST00000561662 MINPP1Q9UNW1 487 aa23.58■■□□□ 1.37
COMMD4-204ENST00000561662 LDLRAD1Q5T700 205 aa23.57■■□□□ 1.36
COMMD4-204ENST00000561662 IFNL1Q8IU54 200 aa23.57■■□□□ 1.36
COMMD4-204ENST00000561662 SPEF2Q9C093 1822 aa23.56■■□□□ 1.36
COMMD4-204ENST00000561662 IGF2BP3O00425 579 aaKnown RBP eCLIP23.56■■□□□ 1.36
COMMD4-204ENST00000561662 EN2P19622 333 aaPredicted RBP23.56■■□□□ 1.36
COMMD4-204ENST00000561662 KLRK1P26718 216 aa23.56■■□□□ 1.36
COMMD4-204ENST00000561662 CCT4P50991 539 aaKnown RBP23.56■■□□□ 1.36
COMMD4-204ENST00000561662 CTSWP56202 376 aa23.56■■□□□ 1.36
COMMD4-204ENST00000561662 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
COMMD4-204ENST00000561662 SLC10A4Q96EP9 437 aa23.56■■□□□ 1.36
COMMD4-204ENST00000561662 GREM2Q9H772 168 aa23.56■■□□□ 1.36
COMMD4-204ENST00000561662 ZNF646O15015 1829 aaPredicted RBP23.56■■□□□ 1.36
COMMD4-204ENST00000561662 APOBEC3FQ8IUX4 373 aaKnown RBP23.55■■□□□ 1.36
COMMD4-204ENST00000561662 CD99L2Q8TCZ2 262 aa23.55■■□□□ 1.36
COMMD4-204ENST00000561662 CDC5LQ99459 802 aaKnown RBP23.55■■□□□ 1.36
COMMD4-204ENST00000561662 KIAA0100Q14667 2235 aaKnown RBP23.55■■□□□ 1.36
COMMD4-204ENST00000561662 ALDH1A1P00352 501 aa23.54■■□□□ 1.36
COMMD4-204ENST00000561662 TTLL5Q6EMB2 1281 aa23.54■■□□□ 1.36
COMMD4-204ENST00000561662 RUNDC1Q96C34 613 aa23.53■■□□□ 1.36
COMMD4-204ENST00000561662 METTL22Q9BUU2 404 aaPredicted RBP23.53■■□□□ 1.36
COMMD4-204ENST00000561662 COA1Q9GZY4 146 aa23.53■■□□□ 1.36
COMMD4-204ENST00000561662 BSDC1Q9NW68 430 aaPredicted RBP23.53■■□□□ 1.36
COMMD4-204ENST00000561662 PCDHAC2Q9Y5I4 1007 aa23.53■■□□□ 1.36
COMMD4-204ENST00000561662 MYO3BQ8WXR4 1341 aa23.53■■□□□ 1.36
COMMD4-204ENST00000561662 MANSC4A6NHS7 340 aaPredicted RBP23.52■■□□□ 1.36
COMMD4-204ENST00000561662 FXR1P51114 621 aaKnown RBP eCLIP23.52■■□□□ 1.36
COMMD4-204ENST00000561662 GTF2IP78347 998 aa23.52■■□□□ 1.36
COMMD4-204ENST00000561662 CAP1Q01518 475 aa23.52■■□□□ 1.36
COMMD4-204ENST00000561662 INTS3Q68E01 1043 aaKnown RBP23.52■■□□□ 1.36
COMMD4-204ENST00000561662 TTLL11Q8NHH1 800 aa23.52■■□□□ 1.36
COMMD4-204ENST00000561662 WNK4Q96J92 1243 aa23.52■■□□□ 1.36
COMMD4-204ENST00000561662 DEFB129Q9H1M3 183 aa23.52■■□□□ 1.36
COMMD4-204ENST00000561662 PTPN22Q9Y2R2 807 aa23.52■■□□□ 1.36
COMMD4-204ENST00000561662 DIEXFQ68CQ4 756 aaKnown RBP23.51■■□□□ 1.35
COMMD4-204ENST00000561662 ZBED3Q96IU2 234 aaPredicted RBP23.51■■□□□ 1.35
COMMD4-204ENST00000561662 MAP3K2Q9Y2U5 619 aa23.51■■□□□ 1.35
COMMD4-204ENST00000561662 SSC5DA1L4H1 1573 aa23.5■■□□□ 1.35
COMMD4-204ENST00000561662 CRHR2Q13324 411 aa23.5■■□□□ 1.35
COMMD4-204ENST00000561662 CLRN2A0PK11 232 aa23.48■■□□□ 1.35
COMMD4-204ENST00000561662 F8W031 263 aaPredicted RBP23.48■■□□□ 1.35
COMMD4-204ENST00000561662 IGKV5-2P06315 115 aa23.48■■□□□ 1.35
COMMD4-204ENST00000561662 GJA5P36382 358 aa23.48■■□□□ 1.35
COMMD4-204ENST00000561662 INHBEP58166 350 aa23.48■■□□□ 1.35
COMMD4-204ENST00000561662 ERO1AQ96HE7 468 aa23.48■■□□□ 1.35
COMMD4-204ENST00000561662 EFCC1Q9HA90 598 aa23.48■■□□□ 1.35
COMMD4-204ENST00000561662 MYCP01106 439 aaPredicted RBP23.47■■□□□ 1.35
COMMD4-204ENST00000561662 DLGAP5Q15398 846 aa23.47■■□□□ 1.35
COMMD4-204ENST00000561662 C8orf58Q8NAV2 365 aa23.47■■□□□ 1.35
COMMD4-204ENST00000561662 ZNF804BA4D1E1 1349 aa23.47■■□□□ 1.35
COMMD4-204ENST00000561662 SNAP23O00161 211 aa23.46■■□□□ 1.35
COMMD4-204ENST00000561662 PPP1R12BO60237 982 aaPredicted RBP23.46■■□□□ 1.35
COMMD4-204ENST00000561662 ZBTB48P10074 688 aaPredicted RBP23.46■■□□□ 1.35
COMMD4-204ENST00000561662 AOX1Q06278 1338 aa23.46■■□□□ 1.35
COMMD4-204ENST00000561662 WDR43Q15061 677 aaKnown RBP eCLIP23.46■■□□□ 1.35
COMMD4-204ENST00000561662 RALBP1Q15311 655 aa23.46■■□□□ 1.35
COMMD4-204ENST00000561662 CWF19L2Q2TBE0 894 aaKnown RBP23.46■■□□□ 1.35
COMMD4-204ENST00000561662 CERS5Q8N5B7 392 aa23.46■■□□□ 1.35
COMMD4-204ENST00000561662 ADAMTS8Q9UP79 889 aa23.46■■□□□ 1.35
COMMD4-204ENST00000561662 COLQQ9Y215 455 aaPredicted RBP23.46■■□□□ 1.35
COMMD4-204ENST00000561662 DDX58O95786 925 aaKnown RBP23.45■■□□□ 1.34
COMMD4-204ENST00000561662 MAP3K11Q16584 847 aa23.45■■□□□ 1.34
COMMD4-204ENST00000561662 NBPF12Q5TAG4 269 aaPredicted RBP23.45■■□□□ 1.34
COMMD4-204ENST00000561662 ARMC5Q96C12 935 aa23.45■■□□□ 1.34
COMMD4-204ENST00000561662 PTPN18Q99952 460 aa23.45■■□□□ 1.34
COMMD4-204ENST00000561662 VEZTQ9HBM0 779 aa23.45■■□□□ 1.34
COMMD4-204ENST00000561662 LEMD3Q9Y2U8 911 aa23.45■■□□□ 1.34
COMMD4-204ENST00000561662 ZNF853P0CG23 659 aa23.44■■□□□ 1.34
COMMD4-204ENST00000561662 IGHMBP2P38935 993 aaKnown RBP23.44■■□□□ 1.34
COMMD4-204ENST00000561662 KCNJ4P48050 445 aa23.44■■□□□ 1.34
COMMD4-204ENST00000561662 JAG2Q9Y219 1238 aa23.44■■□□□ 1.34
COMMD4-204ENST00000561662 PI4KAP2A4QPH2 592 aa23.43■■□□□ 1.34
COMMD4-204ENST00000561662 SP3Q02447 781 aa23.43■■□□□ 1.34
COMMD4-204ENST00000561662 UBE3BQ7Z3V4 1068 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms