RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 PAK6Q9NQU5 681 aaPredicted RBP8.16□□□□□ -1.1
USP8-216ENST00000561206 SEC31BQ9NQW1 1179 aa8.16□□□□□ -1.1
USP8-216ENST00000561206 MEGF11A6BM72 1044 aa8.15□□□□□ -1.1
USP8-216ENST00000561206 HINFPQ9BQA5 517 aa8.15□□□□□ -1.1
USP8-216ENST00000561206 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
USP8-216ENST00000561206 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.15□□□□□ -1.1
USP8-216ENST00000561206 EPHA1P21709 976 aa8.14□□□□□ -1.11
USP8-216ENST00000561206 ATP11AP98196 1134 aa8.14□□□□□ -1.11
USP8-216ENST00000561206 COL13A1Q5TAT6 717 aaPredicted RBP8.14□□□□□ -1.11
USP8-216ENST00000561206 CEP135Q66GS9 1140 aa8.14□□□□□ -1.11
USP8-216ENST00000561206 TREML1Q86YW5 311 aa8.14□□□□□ -1.11
USP8-216ENST00000561206 ADAM19Q9H013 955 aa8.14□□□□□ -1.11
USP8-216ENST00000561206 LRFN2Q9ULH4 789 aa8.14□□□□□ -1.11
USP8-216ENST00000561206 KIF4AO95239 1232 aa8.13□□□□□ -1.11
USP8-216ENST00000561206 WEE1P30291 646 aa8.13□□□□□ -1.11
USP8-216ENST00000561206 OSGEPQ9NPF4 335 aa8.13□□□□□ -1.11
USP8-216ENST00000561206 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
USP8-216ENST00000561206 HYAL2Q12891 473 aa8.12□□□□□ -1.11
USP8-216ENST00000561206 TRIP4Q15650 581 aaPredicted RBP8.12□□□□□ -1.11
USP8-216ENST00000561206 ZNF124Q15973 351 aa8.12□□□□□ -1.11
USP8-216ENST00000561206 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
USP8-216ENST00000561206 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
USP8-216ENST00000561206 SGO2Q562F6 1265 aa8.11□□□□□ -1.11
USP8-216ENST00000561206 SPACA7Q96KW9 195 aa8.11□□□□□ -1.11
USP8-216ENST00000561206 RUSC1Q9BVN2 902 aa8.11□□□□□ -1.11
USP8-216ENST00000561206 POM121CA8CG34 1229 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 GAS2O43903 313 aaKnown RBP8.1□□□□□ -1.11
USP8-216ENST00000561206 PTPRAP18433 802 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 PTK7Q13308 1070 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 TPRNQ4KMQ1 711 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 FLCNQ8NFG4 579 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 PBX4Q9BYU1 374 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
USP8-216ENST00000561206 H3BRJ5 948 aa8.09□□□□□ -1.11
USP8-216ENST00000561206 CYP26A1O43174 497 aa8.09□□□□□ -1.11
USP8-216ENST00000561206 FARP2O94887 1054 aaPredicted RBP8.09□□□□□ -1.11
USP8-216ENST00000561206 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
USP8-216ENST00000561206 SHISA5Q8N114 240 aa8.09□□□□□ -1.11
USP8-216ENST00000561206 SUGCTQ9HAC7 445 aa8.09□□□□□ -1.11
USP8-216ENST00000561206 SH2B1Q9NRF2 756 aaPredicted RBP8.09□□□□□ -1.11
USP8-216ENST00000561206 BIN1O00499 593 aa8.08□□□□□ -1.12
USP8-216ENST00000561206 TIAF1O95411 115 aa8.08□□□□□ -1.12
USP8-216ENST00000561206 CDC25BP30305 580 aa8.08□□□□□ -1.12
USP8-216ENST00000561206 DPYDQ12882 1025 aa8.08□□□□□ -1.12
USP8-216ENST00000561206 ZMYND15Q9H091 742 aa8.08□□□□□ -1.12
USP8-216ENST00000561206 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.08□□□□□ -1.121e-9■■■■■ 40.9
USP8-216ENST00000561206 CRTC2Q53ET0 693 aaPredicted RBP8.07□□□□□ -1.12
USP8-216ENST00000561206 CEP120Q8N960 986 aa8.07□□□□□ -1.12
USP8-216ENST00000561206 SMG8Q8ND04 991 aaKnown RBP8.07□□□□□ -1.12
USP8-216ENST00000561206 LGR5O75473 907 aa8.06□□□□□ -1.12
USP8-216ENST00000561206 LARP1Q6PKG0 1096 aaKnown RBP8.06□□□□□ -1.12
USP8-216ENST00000561206 TMPRSS13Q9BYE2 586 aa8.06□□□□□ -1.12
USP8-216ENST00000561206 FAM95CA0A1B0GW59 222 aa8.05□□□□□ -1.12
USP8-216ENST00000561206 PAOXQ6QHF9 649 aa8.05□□□□□ -1.12
USP8-216ENST00000561206 ZAR1Q86SH2 424 aa8.05□□□□□ -1.12
USP8-216ENST00000561206 CILP2Q8IUL8 1156 aa8.05□□□□□ -1.12
USP8-216ENST00000561206 BHLHE22Q8NFJ8 381 aaPredicted RBP8.05□□□□□ -1.12
USP8-216ENST00000561206 GATA6Q92908 595 aa8.05□□□□□ -1.12
USP8-216ENST00000561206 VTI1AQ96AJ9 217 aa8.05□□□□□ -1.12
USP8-216ENST00000561206 POP1Q99575 1024 aaKnown RBP8.05□□□□□ -1.12
USP8-216ENST00000561206 ADMP35318 185 aa8.04□□□□□ -1.12
USP8-216ENST00000561206 PKN1Q16512 942 aa8.04□□□□□ -1.12
USP8-216ENST00000561206 COX20Q5RI15 118 aa8.04□□□□□ -1.12
USP8-216ENST00000561206 WFDC3Q8IUB2 231 aa8.04□□□□□ -1.12
USP8-216ENST00000561206 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
USP8-216ENST00000561206 EZH1Q92800 747 aaPredicted RBP8.04□□□□□ -1.12
USP8-216ENST00000561206 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
USP8-216ENST00000561206 KRTAP9-3Q9BYQ3 159 aa8.04□□□□□ -1.12
USP8-216ENST00000561206 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
USP8-216ENST00000561206 FAM196BA6NMK8 535 aa8.03□□□□□ -1.12
USP8-216ENST00000561206 RXRBP28702 533 aa8.03□□□□□ -1.12
USP8-216ENST00000561206 ETFBKMTQ8IXQ9 262 aa8.03□□□□□ -1.12
USP8-216ENST00000561206 PRKAG2Q9UGJ0 569 aa8.03□□□□□ -1.12
USP8-216ENST00000561206 FAM177BA6PVY3 158 aa8.02□□□□□ -1.13
USP8-216ENST00000561206 UBAP1LF5GYI3 381 aa8.02□□□□□ -1.13
USP8-216ENST00000561206 CABP4P57796 275 aa8.02□□□□□ -1.13
USP8-216ENST00000561206 NLRP12P59046 1061 aa8.02□□□□□ -1.13
USP8-216ENST00000561206 ATG4DQ86TL0 474 aaPredicted RBP8.02□□□□□ -1.13
USP8-216ENST00000561206 ZC3H7BQ9UGR2 993 aaKnown RBP8.02□□□□□ -1.13
USP8-216ENST00000561206 SCNN1AP37088 669 aa8.01□□□□□ -1.13
USP8-216ENST00000561206 KANK4Q5T7N3 995 aaPredicted RBP8.01□□□□□ -1.13
USP8-216ENST00000561206 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
USP8-216ENST00000561206 TMEM40Q8WWA1 233 aa8.01□□□□□ -1.13
USP8-216ENST00000561206 ARXQ96QS3 562 aa8.01□□□□□ -1.13
USP8-216ENST00000561206 CYP4F12Q9HCS2 524 aa8.01□□□□□ -1.13
USP8-216ENST00000561206 NCANO14594 1321 aa8.01□□□□□ -1.13
USP8-216ENST00000561206 USP17L15C9J2P7 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L10C9JJH3 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L13C9JLJ4 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L12C9JPN9 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L11C9JVI0 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L21D6R901 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L18D6R9N7 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L22D6RA61 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L17D6RBQ6 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L19D6RCP7 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L20D6RJB6 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 USP17L24Q0WX57 530 aa8□□□□□ -1.13
USP8-216ENST00000561206 NFKBIBQ15653 356 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms