RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 HSP90AB3PQ58FF7 597 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 TICAM2Q86XR7 235 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 GOLGA6L4A6NEF3 574 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 CCDC192P0DO97 292 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 PLCB2Q00722 1185 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 IFIT5Q13325 482 aaKnown RBP17.24■□□□□ 0.35
CRTC3-210ENST00000560927 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 LLPHQ9BRT6 129 aaKnown RBP17.24■□□□□ 0.35
CRTC3-210ENST00000560927 PLA2G12BQ9BX93 195 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 BTG4Q9NY30 223 aa17.24■□□□□ 0.35
CRTC3-210ENST00000560927 PTPDC1A2A3K4 754 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 ZAP70P43403 619 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 MAP3K11Q16584 847 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 AKAP2Q9Y2D5 859 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 SPEF2Q9C093 1822 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
CRTC3-210ENST00000560927 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
CRTC3-210ENST00000560927 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
CRTC3-210ENST00000560927 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
CRTC3-210ENST00000560927 NR1I2O75469 434 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 STARD3NLO95772 234 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 HAND2P61296 217 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 GPHNQ9NQX3 736 aaPredicted RBP17.22■□□□□ 0.35
CRTC3-210ENST00000560927 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
CRTC3-210ENST00000560927 PDIA3P30101 505 aaKnown RBP17.22■□□□□ 0.35
CRTC3-210ENST00000560927 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
CRTC3-210ENST00000560927 TYRO3Q06418 890 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 FTOQ9C0B1 505 aaKnown RBP eCLIP17.22■□□□□ 0.35
CRTC3-210ENST00000560927 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 GREM2Q9H772 168 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 RIC1Q4ADV7 1423 aa17.22■□□□□ 0.35
CRTC3-210ENST00000560927 ADD1P35611 737 aaKnown RBP17.21■□□□□ 0.35
CRTC3-210ENST00000560927 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
CRTC3-210ENST00000560927 PUS7LQ9H0K6 701 aaKnown RBP17.21■□□□□ 0.35
CRTC3-210ENST00000560927 ZSCAN16Q9H4T2 348 aaPredicted RBP17.21■□□□□ 0.35
CRTC3-210ENST00000560927 TTC12Q9H892 705 aaPredicted RBP17.21■□□□□ 0.35
CRTC3-210ENST00000560927 TTLL11Q8NHH1 800 aa17.21■□□□□ 0.34
CRTC3-210ENST00000560927 BICD2Q8TD16 824 aa17.21■□□□□ 0.34
CRTC3-210ENST00000560927 RIPOR2Q9Y4F9 1068 aa17.21■□□□□ 0.34
CRTC3-210ENST00000560927 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
CRTC3-210ENST00000560927 ITGA6P23229 1130 aa17.2■□□□□ 0.34
CRTC3-210ENST00000560927 NWD2Q9ULI1 1742 aa17.2■□□□□ 0.34
CRTC3-210ENST00000560927 FGAP02671 866 aa17.2■□□□□ 0.34
CRTC3-210ENST00000560927 ATP2B3Q16720 1220 aa17.2■□□□□ 0.34
CRTC3-210ENST00000560927 METTL24Q5JXM2 366 aa17.2■□□□□ 0.34
CRTC3-210ENST00000560927 LDHAL6AQ6ZMR3 332 aa17.2■□□□□ 0.34
CRTC3-210ENST00000560927 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.19■□□□□ 0.34
CRTC3-210ENST00000560927 TPM2P07951 284 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 NAA16Q6N069 864 aaPredicted RBP17.19■□□□□ 0.34
CRTC3-210ENST00000560927 CLSTN2Q9H4D0 955 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 DDX19AQ9NUU7 478 aaKnown RBP17.19■□□□□ 0.34
CRTC3-210ENST00000560927 ZBTB1Q9Y2K1 713 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 ZFYP08048 801 aaPredicted RBP17.19■□□□□ 0.34
CRTC3-210ENST00000560927 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
CRTC3-210ENST00000560927 MCAMP43121 646 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
CRTC3-210ENST00000560927 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 LUZP1Q86V48 1076 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 FAM200AQ8TCP9 573 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 ZNF274Q96GC6 653 aaPredicted RBP17.19■□□□□ 0.34
CRTC3-210ENST00000560927 ITGB4P16144 1822 aa17.19■□□□□ 0.34
CRTC3-210ENST00000560927 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
CRTC3-210ENST00000560927 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
CRTC3-210ENST00000560927 APPBP2Q92624 585 aa17.18■□□□□ 0.34
CRTC3-210ENST00000560927 CFAP45Q9UL16 551 aa17.18■□□□□ 0.34
CRTC3-210ENST00000560927 CTSWP56202 376 aa17.18■□□□□ 0.34
CRTC3-210ENST00000560927 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
CRTC3-210ENST00000560927 LRRFIP1Q32MZ4 808 aaKnown RBP17.18■□□□□ 0.34
CRTC3-210ENST00000560927 ANO6Q4KMQ2 910 aa17.18■□□□□ 0.34
CRTC3-210ENST00000560927 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
CRTC3-210ENST00000560927 BCL9O00512 1426 aa17.17■□□□□ 0.34
CRTC3-210ENST00000560927 FDPSP14324 419 aaKnown RBP17.17■□□□□ 0.34
CRTC3-210ENST00000560927 SYTL4Q96C24 671 aaPredicted RBP17.17■□□□□ 0.34
CRTC3-210ENST00000560927 CTNNA3Q9UI47 895 aa17.17■□□□□ 0.34
CRTC3-210ENST00000560927 IRS4O14654 1257 aaPredicted RBP17.16■□□□□ 0.34
CRTC3-210ENST00000560927 GPAA1O43292 621 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
CRTC3-210ENST00000560927 C17orf53Q8N3J3 647 aaPredicted RBP17.16■□□□□ 0.34
CRTC3-210ENST00000560927 DISP2A7MBM2 1401 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 VGLL2Q8N8G2 317 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 CBX8Q9HC52 389 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 CNNM1Q9NRU3 951 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
CRTC3-210ENST00000560927 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 CARMIL3Q8ND23 1372 aa17.16■□□□□ 0.34
CRTC3-210ENST00000560927 ANKRD18BA2A2Z9 1011 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 EVCP57679 992 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 RAB11FIP4Q86YS3 637 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 FBXL16Q8N461 479 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 KAT6BQ8WYB5 2073 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 LRP6O75581 1613 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms