RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 HSP90AB4PQ58FF6 505 aa9.94□□□□□ -0.82
CPNE6-218ENST00000560845 EPHA10Q5JZY3 1008 aa9.94□□□□□ -0.82
CPNE6-218ENST00000560845 NLRP3Q96P20 1036 aa9.94□□□□□ -0.82
CPNE6-218ENST00000560845 TMX4Q9H1E5 349 aaPredicted RBP9.94□□□□□ -0.82
CPNE6-218ENST00000560845 TSKSQ9UJT2 592 aa9.94□□□□□ -0.82
CPNE6-218ENST00000560845 ATP6V0A2Q9Y487 856 aa9.94□□□□□ -0.82
CPNE6-218ENST00000560845 RAB11FIP3O75154 756 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 SURF6O75683 361 aaKnown RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 CELF2O95319 508 aaKnown RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 GMPSP49915 693 aaPredicted RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 MLLT1Q03111 559 aaPredicted RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 CXCL9Q07325 125 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 OS9Q13438 667 aaPredicted RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 SAPCD2Q86UD0 394 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 ZBTB38Q8NAP3 1195 aaPredicted RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 SUPT20HQ8NEM7 779 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 RTFDC1Q9BY42 306 aaPredicted RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 GLIS2Q9BZE0 524 aaPredicted RBP9.93□□□□□ -0.82
CPNE6-218ENST00000560845 LRRCC1Q9C099 1032 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 VPS33BQ9H267 617 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 ZNRF3Q9ULT6 936 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 NUP98P52948 1817 aa9.93□□□□□ -0.82
CPNE6-218ENST00000560845 CA12O43570 354 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 SMARCA5O60264 1052 aaPredicted RBP9.92□□□□□ -0.82
CPNE6-218ENST00000560845 RGS19P49795 217 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 FOXO4P98177 505 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 DPP8Q6V1X1 898 aaPredicted RBP9.92□□□□□ -0.82
CPNE6-218ENST00000560845 ERC1Q8IUD2 1116 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 KIF1BPQ96EK5 621 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 HHIPL1Q96JK4 782 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 UTP14AQ9BVJ6 771 aaKnown RBP9.92□□□□□ -0.82
CPNE6-218ENST00000560845 PLA2G12BQ9BX93 195 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 TRMT112Q9UI30 125 aaKnown RBP9.92□□□□□ -0.82
CPNE6-218ENST00000560845 CHMP3Q9Y3E7 222 aa9.92□□□□□ -0.82
CPNE6-218ENST00000560845 TRPM7Q96QT4 1865 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 SLC10A5Q5PT55 438 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 CIAPIN1Q6FI81 312 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 LMBR1LQ6UX01 489 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 RHPN1Q8TCX5 695 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 TRPM4Q8TD43 1214 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 MCOLN1Q9GZU1 580 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 BCL11AQ9H165 835 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 ZNF408Q9H9D4 720 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 PGAP2Q9UHJ9 254 aa9.91□□□□□ -0.82
CPNE6-218ENST00000560845 PA2G4Q9UQ80 394 aaKnown RBP9.91□□□□□ -0.82
CPNE6-218ENST00000560845 SH3TC1Q8TE82 1336 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 IRS4O14654 1257 aaPredicted RBP9.9□□□□□ -0.82
CPNE6-218ENST00000560845 BBOX1O75936 387 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 RAD17O75943 681 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 RFX5P48382 616 aaPredicted RBP9.9□□□□□ -0.82
CPNE6-218ENST00000560845 CTSWP56202 376 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 TNIP1Q15025 636 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 SP8Q8IXZ3 490 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 MPNDQ8N594 471 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 OTUD7AQ8TE49 926 aaPredicted RBP9.9□□□□□ -0.82
CPNE6-218ENST00000560845 ZC3H15Q8WU90 426 aaKnown RBP9.9□□□□□ -0.82
CPNE6-218ENST00000560845 COPRSQ9NQ92 184 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 LAMB2P55268 1798 aa9.9□□□□□ -0.82
CPNE6-218ENST00000560845 SHTN1A0MZ66 631 aa9.89□□□□□ -0.83
CPNE6-218ENST00000560845 HCLS1P14317 486 aaPredicted RBP9.89□□□□□ -0.83
CPNE6-218ENST00000560845 HSP90B1P14625 803 aaKnown RBP9.89□□□□□ -0.83
CPNE6-218ENST00000560845 HIRAP54198 1017 aaPredicted RBP9.89□□□□□ -0.83
CPNE6-218ENST00000560845 G3BP1Q13283 466 aaKnown RBP eCLIP9.89□□□□□ -0.83
CPNE6-218ENST00000560845 CDC37L1Q7L3B6 337 aa9.89□□□□□ -0.83
CPNE6-218ENST00000560845 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
CPNE6-218ENST00000560845 SIL1Q9H173 461 aa9.89□□□□□ -0.83
CPNE6-218ENST00000560845 IL1RAPL2Q9NP60 686 aa9.89□□□□□ -0.83
CPNE6-218ENST00000560845 DUOX1Q9NRD9 1551 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 YDJCA8MPS7 323 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 PDE8AO60658 829 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
CPNE6-218ENST00000560845 NOGQ13253 232 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 GRAPQ13588 217 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 BMP2KLQ5H9B9 411 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 DDX46Q7L014 1031 aaKnown RBP9.88□□□□□ -0.83
CPNE6-218ENST00000560845 ERICH6Q7L0X2 663 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 KLHDC4Q8TBB5 520 aa9.88□□□□□ -0.83
CPNE6-218ENST00000560845 GRAPLQ8TC17 118 aaPredicted RBP9.88□□□□□ -0.83
CPNE6-218ENST00000560845 CNOT7Q9UIV1 285 aaKnown RBP9.88□□□□□ -0.83
CPNE6-218ENST00000560845 AOX1Q06278 1338 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 SALL3Q9BXA9 1300 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 H7C1D1 291 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 CSF1RP07333 972 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 MX1P20591 662 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 HUNKP57058 714 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 DGKZQ13574 1117 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 CCDC57Q2TAC2 916 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 TAF7LQ5H9L4 462 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 TTC22Q5TAA0 569 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 USP48Q86UV5 1035 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 CLASRPQ8N2M8 674 aaKnown RBP9.87□□□□□ -0.83
CPNE6-218ENST00000560845 ZIC5Q96T25 663 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 PCDH10Q9P2E7 1040 aa9.87□□□□□ -0.83
CPNE6-218ENST00000560845 DDX60Q8IY21 1712 aaKnown RBP9.87□□□□□ -0.83
CPNE6-218ENST00000560845 CIAO1O76071 339 aa9.86□□□□□ -0.83
CPNE6-218ENST00000560845 SASH1O94885 1247 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms