RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 RPAP2Q8IXW5 612 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 KLHDC4Q8TBB5 520 aa8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 CRAMP1Q96RY5 1269 aa8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 PPP1R1BQ9UD71 204 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 ZNF646O15015 1829 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL2-210ENST00000560834 ANKRD18BA2A2Z9 1011 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 IFIT5Q13325 482 aaKnown RBP8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 PRPF40BQ6NWY9 871 aaKnown RBP8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 RBM17Q96I25 401 aaKnown RBP8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 HS3ST6Q96QI5 342 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 SYT17Q9BSW7 474 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 ZNF609O15014 1411 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 UTRNP46939 3433 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 TIAM2Q8IVF5 1701 aa8.76□□□□□ -1.01
CTDSPL2-210ENST00000560834 TTLL13PA6NNM8 815 aa8.75□□□□□ -1.01
CTDSPL2-210ENST00000560834 ANKRD18AQ8IVF6 992 aa8.75□□□□□ -1.01
CTDSPL2-210ENST00000560834 ZNF622Q969S3 477 aaKnown RBP eCLIP8.75□□□□□ -1.015e-7■■□□□ 13.1
CTDSPL2-210ENST00000560834 MAP3K13O43283 966 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 IGHMBP2P38935 993 aaKnown RBP8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 HDAC1Q13547 482 aaPredicted RBP8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 LRRC24Q50LG9 513 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 OLFM4Q6UX06 510 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 ATG9AQ7Z3C6 839 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 CNKSR1Q969H4 720 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 PUS3Q9BZE2 481 aaKnown RBP8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 SIL1Q9H173 461 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 PIM2Q9P1W9 311 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 WWC3Q9ULE0 1092 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 NOP58Q9Y2X3 529 aaKnown RBP8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 MYH13Q9UKX3 1938 aa8.74□□□□□ -1.01
CTDSPL2-210ENST00000560834 PSME4Q14997 1843 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 COL4A5P29400 1685 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 EYA2O00167 538 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 HMMRO75330 724 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 CIAO1O76071 339 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 IGHDP01880 384 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 ALDH1B1P30837 517 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 RPS8P62241 208 aaKnown RBP8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 LDHAL6AQ6ZMR3 332 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 TMC4Q7Z404 712 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 TTLL6Q8N841 843 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 VGLL2Q8N8G2 317 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 FBXO22Q8NEZ5 403 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 KCNV2Q8TDN2 545 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 BSDC1Q9NW68 430 aaPredicted RBP8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 WDR70Q9NW82 654 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 EXOC6BQ9Y2D4 811 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 ATP6V0A2Q9Y487 856 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 RIPOR2Q9Y4F9 1068 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 KDM2BQ8NHM5 1336 aa8.73□□□□□ -1.01
CTDSPL2-210ENST00000560834 SBF1O95248 1867 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 DICER1Q9UPY3 1922 aaKnown RBP8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 FAM205CA6NFA0 338 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 BBOX1O75936 387 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 SASH1O94885 1247 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 CHRNDQ07001 517 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 DALRD3Q5D0E6 543 aaKnown RBP8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 MPHOSPH8Q99549 860 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 CNNM1Q9NRU3 951 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 MINPP1Q9UNW1 487 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 MROH5Q6ZUA9 1318 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 IRS2Q9Y4H2 1338 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 CCDC88AQ3V6T2 1871 aa8.72□□□□□ -1.01
CTDSPL2-210ENST00000560834 C21orf2O43822 256 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 SURF6O75683 361 aaKnown RBP8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 IL15P40933 162 aaPredicted RBP8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 GPSM2P81274 684 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 CCDC93Q567U6 631 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 SP8Q8IXZ3 490 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 SMC5Q8IY18 1101 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 EFCAB3Q8N7B9 438 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 DCTPP1Q9H773 170 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 XDHP47989 1333 aa8.71□□□□□ -1.02
CTDSPL2-210ENST00000560834 POTEB3A0JP26 581 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 WTIPA6NIX2 430 aaPredicted RBP8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 SNAP23O00161 211 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 NFKBIEO00221 500 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 FGFR2P21802 821 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 METTL24Q5JXM2 366 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 POTEBQ6S5H4 581 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 MED23Q9ULK4 1368 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 SCN9AQ15858 1988 aa8.7□□□□□ -1.02
CTDSPL2-210ENST00000560834 MAST2Q6P0Q8 1798 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 DOCK2Q92608 1830 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 RAB11FIP3O75154 756 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 TAF5LO75529 589 aa8.69□□□□□ -1.02
CTDSPL2-210ENST00000560834 PDE8BO95263 885 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms