RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
TPM1-225ENST00000560679 FZD1Q9UP38 647 aa12.92□□□□□ -0.34
TPM1-225ENST00000560679 CAP1Q01518 475 aa12.91□□□□□ -0.34
TPM1-225ENST00000560679 PRKG1Q13976 671 aa12.91□□□□□ -0.34
TPM1-225ENST00000560679 JARID2Q92833 1246 aaPredicted RBP12.91□□□□□ -0.34
TPM1-225ENST00000560679 HYPKQ9NX55 129 aa12.91□□□□□ -0.34
TPM1-225ENST00000560679 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
TPM1-225ENST00000560679 TRIM17Q9Y577 477 aa12.91□□□□□ -0.34
TPM1-225ENST00000560679 MYH3P11055 1940 aa12.9□□□□□ -0.34
TPM1-225ENST00000560679 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
TPM1-225ENST00000560679 PCCAP05165 728 aaPredicted RBP12.9□□□□□ -0.34
TPM1-225ENST00000560679 ATP2B4P23634 1241 aa12.9□□□□□ -0.34
TPM1-225ENST00000560679 NF2P35240 595 aa12.9□□□□□ -0.34
TPM1-225ENST00000560679 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
TPM1-225ENST00000560679 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
TPM1-225ENST00000560679 COL1A1P02452 1464 aaPredicted RBP12.9□□□□□ -0.34
TPM1-225ENST00000560679 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
TPM1-225ENST00000560679 RANBP2P49792 3224 aaKnown RBP12.9□□□□□ -0.34
TPM1-225ENST00000560679 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
TPM1-225ENST00000560679 PDE8AO60658 829 aa12.89□□□□□ -0.35
TPM1-225ENST00000560679 ARMC9Q7Z3E5 817 aa12.89□□□□□ -0.35
TPM1-225ENST00000560679 ANKRD18AQ8IVF6 992 aa12.89□□□□□ -0.35
TPM1-225ENST00000560679 ARMC5Q96C12 935 aa12.89□□□□□ -0.35
TPM1-225ENST00000560679 ZBED3Q96IU2 234 aaPredicted RBP12.89□□□□□ -0.35
TPM1-225ENST00000560679 MYD88Q99836 296 aa12.89□□□□□ -0.35
TPM1-225ENST00000560679 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
TPM1-225ENST00000560679 ANGEL1Q9UNK9 670 aaKnown RBP12.89□□□□□ -0.35
TPM1-225ENST00000560679 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 EN2P19622 333 aaPredicted RBP12.88□□□□□ -0.35
TPM1-225ENST00000560679 NEUROD2Q15784 382 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
TPM1-225ENST00000560679 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 APOBEC3FQ8IUX4 373 aaKnown RBP12.88□□□□□ -0.35
TPM1-225ENST00000560679 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 CD99L2Q8TCZ2 262 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 MINPP1Q9UNW1 487 aa12.88□□□□□ -0.35
TPM1-225ENST00000560679 CEP290O15078 2479 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 MANSC4A6NHS7 340 aaPredicted RBP12.87□□□□□ -0.35
TPM1-225ENST00000560679 KLRK1P26718 216 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 GJA5P36382 358 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 CTSWP56202 376 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 OGFOD1Q8N543 542 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 WNK4Q96J92 1243 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
TPM1-225ENST00000560679 PTPN22Q9Y2R2 807 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 TRIOBPQ9H2D6 2365 aa12.87□□□□□ -0.35
TPM1-225ENST00000560679 ZBTB48P10074 688 aaPredicted RBP12.86□□□□□ -0.35
TPM1-225ENST00000560679 HSP90B1P14625 803 aaKnown RBP12.86□□□□□ -0.35
TPM1-225ENST00000560679 CCT4P50991 539 aaKnown RBP12.86□□□□□ -0.35
TPM1-225ENST00000560679 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
TPM1-225ENST00000560679 GREM2Q9H772 168 aa12.86□□□□□ -0.35
TPM1-225ENST00000560679 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
TPM1-225ENST00000560679 A0A1B0GUL6 1792 aa12.86□□□□□ -0.35
TPM1-225ENST00000560679 CRHR2Q13324 411 aa12.85□□□□□ -0.35
TPM1-225ENST00000560679 KIAA0825Q8IV33 1275 aa12.85□□□□□ -0.35
TPM1-225ENST00000560679 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
TPM1-225ENST00000560679 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
TPM1-225ENST00000560679 BSDC1Q9NW68 430 aaPredicted RBP12.85□□□□□ -0.35
TPM1-225ENST00000560679 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
TPM1-225ENST00000560679 AOX1Q06278 1338 aa12.85□□□□□ -0.35
TPM1-225ENST00000560679 ZSWIM8A7E2V4 1837 aa12.84□□□□□ -0.35
TPM1-225ENST00000560679 INHBEP58166 350 aa12.84□□□□□ -0.35
TPM1-225ENST00000560679 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
TPM1-225ENST00000560679 SLC10A4Q96EP9 437 aa12.84□□□□□ -0.35
TPM1-225ENST00000560679 ERO1AQ96HE7 468 aa12.84□□□□□ -0.35
TPM1-225ENST00000560679 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
TPM1-225ENST00000560679 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
TPM1-225ENST00000560679 PCDHAC2Q9Y5I4 1007 aa12.84□□□□□ -0.35
TPM1-225ENST00000560679 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 ZNF853P0CG23 659 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 MMP14P50281 582 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 CERS5Q8N5B7 392 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 ZNF333Q96JL9 665 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 PTPN18Q99952 460 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 EFCC1Q9HA90 598 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
TPM1-225ENST00000560679 GTF2IP78347 998 aa12.82□□□□□ -0.36
TPM1-225ENST00000560679 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
TPM1-225ENST00000560679 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
TPM1-225ENST00000560679 ZNF804BA4D1E1 1349 aa12.82□□□□□ -0.36
TPM1-225ENST00000560679 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
TPM1-225ENST00000560679 SP3Q02447 781 aa12.81□□□□□ -0.36
TPM1-225ENST00000560679 MTMR14Q8NCE2 650 aa12.81□□□□□ -0.36
TPM1-225ENST00000560679 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
TPM1-225ENST00000560679 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
TPM1-225ENST00000560679 CLRN2A0PK11 232 aa12.8□□□□□ -0.36
TPM1-225ENST00000560679 UNCXA6NJT0 531 aa12.8□□□□□ -0.36
TPM1-225ENST00000560679 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
TPM1-225ENST00000560679 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
TPM1-225ENST00000560679 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
TPM1-225ENST00000560679 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms