RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 A0A1B0GUL7 405 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 PSDA5PKW4 1024 aaPredicted RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 GOLGA6L3A6NEY3 463 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 GOLGA6L22H0YM25 854 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 CASTP20810 708 aaKnown RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 EIF5P55010 431 aaKnown RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 MCMDC2Q4G0Z9 681 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 HSP90AB3PQ58FF7 597 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 ZMYM1Q5SVZ6 1142 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 INTS5Q6P9B9 1019 aaKnown RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 MARCH10Q8NA82 808 aaPredicted RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 TTLL11Q8NHH1 800 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 ZSCAN31Q96LW9 406 aaPredicted RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 NEUROD6Q96NK8 337 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 SEC62Q99442 399 aaKnown RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 LARP6Q9BRS8 491 aaKnown RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 CEP126Q9P2H0 1117 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 ISY1Q9ULR0 285 aaKnown RBP7.24□□□□□ -1.25
PCAT29-204ENST00000560655 RIPOR2Q9Y4F9 1068 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 CYP46A1Q9Y6A2 500 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 PLCH1Q4KWH8 1693 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 ZNF609O15014 1411 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 SPATA31A5Q5VU36 1347 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 SPATA31A7Q8IWB4 1347 aa7.24□□□□□ -1.25
PCAT29-204ENST00000560655 PALLDQ8WX93 1383 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 PRPF40AO75400 957 aaKnown RBP7.23□□□□□ -1.25
PCAT29-204ENST00000560655 ADAMTS2O95450 1211 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 ZKSCAN1P17029 563 aaPredicted RBP7.23□□□□□ -1.25
PCAT29-204ENST00000560655 RPS6KB1P23443 525 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 GPTP24298 496 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 PSMA5P28066 241 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 ADORA1P30542 326 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 TOB2Q14106 344 aaPredicted RBP7.23□□□□□ -1.25
PCAT29-204ENST00000560655 ME3Q16798 604 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 CCDC57Q2TAC2 916 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 SLFNL1Q499Z3 407 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 ZNF787Q6DD87 383 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 CCDC129Q6ZRS4 1044 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 BARGINQ6ZT62 677 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 DDX46Q7L014 1031 aaKnown RBP7.23□□□□□ -1.25
PCAT29-204ENST00000560655 GPT2Q8TD30 523 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 DNAJC2Q99543 621 aaKnown RBP7.23□□□□□ -1.25
PCAT29-204ENST00000560655 HELLSQ9NRZ9 838 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 HMG20BQ9P0W2 317 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 TPCN1Q9ULQ1 816 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 ZNF330Q9Y3S2 320 aaPredicted RBP7.23□□□□□ -1.25
PCAT29-204ENST00000560655 SH3TC1Q8TE82 1336 aa7.23□□□□□ -1.25
PCAT29-204ENST00000560655 SLIT2O94813 1529 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 NRAPQ86VF7 1730 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 GOLIM4O00461 696 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 GFRA3O60609 400 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 IFIT1P09914 478 aaKnown RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 MRE11P49959 708 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 ZNF445P59923 1031 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 IFIT5Q13325 482 aaKnown RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 ITPK1Q13572 414 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 DDB1Q16531 1140 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 RNF20Q5VTR2 975 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 DZIP3Q86Y13 1208 aaKnown RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 FOXD4L4Q8WXT5 416 aaPredicted RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 GREM2Q9H772 168 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 SH2B1Q9NRF2 756 aaPredicted RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 PAG1Q9NWQ8 432 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 NSFL1CQ9UNZ2 370 aaKnown RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 TBC1D2BQ9UPU7 963 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 AKAP2Q9Y2D5 859 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 DDX49Q9Y6V7 483 aaKnown RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 UBN2Q6ZU65 1347 aa7.22□□□□□ -1.25
PCAT29-204ENST00000560655 WDR33Q9C0J8 1336 aaKnown RBP7.22□□□□□ -1.25
PCAT29-204ENST00000560655 IRS4O14654 1257 aaPredicted RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 RNF113AO15541 343 aaKnown RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 PDE8AO60658 829 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 CAMTA2O94983 1202 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 CYP21A2P08686 494 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 ZSCAN22P10073 491 aaPredicted RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 SYT1P21579 422 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 ITGA6P23229 1130 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 KCNJ4P48050 445 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 CTSWP56202 376 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 SCARF1Q14162 830 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 BLOC1S2Q6QNY1 142 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 STOX1Q6ZVD7 989 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 CCDC83Q8IWF9 413 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 VGLL2Q8N8G2 317 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 NECAB1Q8N987 351 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 TMEM87AQ8NBN3 555 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 ZNF775Q96BV0 537 aaPredicted RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 ACSBG1Q96GR2 724 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 ZNF512BQ96KM6 892 aaPredicted RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 CCDC85AQ96PX6 553 aaPredicted RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 DSCC1Q9BVC3 393 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 GRPEL1Q9HAV7 217 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 CCDC87Q9NVE4 849 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
PCAT29-204ENST00000560655 MTMR6Q9Y217 621 aa7.21□□□□□ -1.26
PCAT29-204ENST00000560655 CCDC9Q9Y3X0 531 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms