RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 MTRF1LQ9UGC7 380 aaKnown RBP14.97□□□□□ -0.01
CSPG4P11-201ENST00000560634 PCDHB15Q9Y5E8 787 aa14.97□□□□□ -0.01
CSPG4P11-201ENST00000560634 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 DAAM2Q86T65 1068 aa14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 PTGS1P23219 599 aa14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 GNAT2P19087 354 aa14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 RAB3IL1Q8TBN0 382 aa14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 C14orf93Q9H972 538 aaKnown RBP14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 SLC4A4Q9Y6R1 1079 aa14.96□□□□□ -0.01
CSPG4P11-201ENST00000560634 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
CSPG4P11-201ENST00000560634 MARCKSP29966 332 aaPredicted RBP14.96□□□□□ -0.02
CSPG4P11-201ENST00000560634 TNNC1P63316 161 aa14.96□□□□□ -0.02
CSPG4P11-201ENST00000560634 RAB3GAP1Q15042 981 aa14.96□□□□□ -0.02
CSPG4P11-201ENST00000560634 PAIP2Q9BPZ3 127 aaKnown RBP14.96□□□□□ -0.02
CSPG4P11-201ENST00000560634 GRM8O00222 908 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 PPP1R2P41236 205 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 PRIM1P49642 420 aaKnown RBP14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 CNGA4Q8IV77 575 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 TMEM87AQ8NBN3 555 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 NEK11Q8NG66 645 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 LUC7L2Q9Y383 392 aaKnown RBP14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 CPLX4Q7Z7G2 160 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 JAKMIP2Q96AA8 810 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 DDX23Q9BUQ8 820 aaKnown RBP14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 KSR2Q6VAB6 950 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 TRMT1LQ7Z2T5 733 aaKnown RBP14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 DHX58Q96C10 678 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 STIM2Q9P246 746 aa14.95□□□□□ -0.02
CSPG4P11-201ENST00000560634 LRRC2Q9BYS8 371 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 RTL9Q8NET4 1388 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 NAPAP54920 295 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 MICALL1Q8N3F8 863 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 IQUBQ8NA54 791 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 TCEANC2Q96MN5 208 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 TTLL12Q14166 644 aaPredicted RBP14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 HEATR3Q7Z4Q2 680 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 CCDC94Q9BW85 323 aaPredicted RBP14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 RAD50Q92878 1312 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 ATP2A2P16615 1042 aaKnown RBP14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 TUBB2AQ13885 445 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 HSP90AA4PQ58FG1 418 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 TUBB2BQ9BVA1 445 aa14.94□□□□□ -0.02
CSPG4P11-201ENST00000560634 FAM83GA6ND36 823 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 SLC9C2Q5TAH2 1124 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 NAA16Q6N069 864 aaPredicted RBP14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 MSANTD4Q8NCY6 345 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 MRVI1Q9Y6F6 885 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 GSTA5Q7RTV2 222 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 CCDC110Q8TBZ0 833 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 MTUS1Q9ULD2 1270 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 ALDH3A1P30838 453 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 IDI1Q13907 227 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 CFAP58Q5T655 872 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 DCTPP1Q9H773 170 aa14.93□□□□□ -0.02
CSPG4P11-201ENST00000560634 PLCB3Q01970 1234 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 SETDB1Q15047 1291 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 LINS1Q8NG48 757 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 ANAPC4Q9UJX5 808 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 GUCA1BQ9UMX6 200 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 A6NNZ2 444 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 GNA11P29992 359 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 TUBB8Q3ZCM7 444 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 HDXQ7Z353 690 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 OGFRQ9NZT2 677 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 SAMD15Q9P1V8 674 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 ABCC5O15440 1437 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 UBXN1Q04323 297 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 CALCOCO2Q13137 446 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 ZNF569Q5MCW4 686 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 LMBR1LQ6UX01 489 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 DHX32Q7L7V1 743 aaKnown RBP14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 CCDC114Q96M63 670 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 TSGA10Q9BZW7 698 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 MRPL50Q8N5N7 158 aaKnown RBP14.92□□□□□ -0.02
CSPG4P11-201ENST00000560634 MAP3K9P80192 1104 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 XAGE3Q8WTP9 111 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 SELENOSQ9BQE4 189 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 IFNKQ9P0W0 207 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 CEP83Q9Y592 693 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 B4DLN1 442 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 PPM1FP49593 454 aaPredicted RBP14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 MRPL12P52815 198 aaKnown RBP14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 MYL5Q02045 173 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 SMARCC2Q8TAQ2 1214 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 FAM76AQ8TAV0 307 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 PAG1Q9NWQ8 432 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 SERPINA10Q9UK55 444 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 NDC80O14777 642 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 RPL13P26373 211 aaKnown RBP14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 COPS6Q7L5N1 327 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 VPS18Q9P253 973 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 CHPF2Q9P2E5 772 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 KRT2P35908 639 aa14.91□□□□□ -0.02
CSPG4P11-201ENST00000560634 MAP7D1Q3KQU3 841 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms