RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 RIC3Q7Z5B4 369 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 XAGE3Q8WTP9 111 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 METTL22Q9BUU2 404 aaPredicted RBP10.12□□□□□ -0.79
CCDC33-209ENST00000560565 ANO2Q9NQ90 1003 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 OGFRQ9NZT2 677 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 PIM2Q9P1W9 311 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 MAP3K2Q9Y2U5 619 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 ZDHHC9Q9Y397 364 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 UTYO14607 1347 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 NPHP1O15259 732 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 ANXA1P04083 346 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 ANKRD1Q15327 319 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 ZGPATQ8N5A5 531 aaKnown RBP10.11□□□□□ -0.79
CCDC33-209ENST00000560565 GPATCH3Q96I76 525 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 MEIS3Q99687 375 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 USP44Q9H0E7 712 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 LIMCH1Q9UPQ0 1083 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 SMC3Q9UQE7 1217 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 BCS1LQ9Y276 419 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 SCN7AQ01118 1682 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 CARMIL3Q8ND23 1372 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 LAMB2P55268 1798 aa10.11□□□□□ -0.79
CCDC33-209ENST00000560565 KIAA1551Q9HCM1 1747 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 ELP1O95163 1332 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 SMTNL1A8MU46 457 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 DLL1O00548 723 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 RGL2O15211 777 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 KCNA3P22001 575 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 CHRNA5P30532 468 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 HSPA4P34932 840 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 DALRD3Q5D0E6 543 aaKnown RBP10.1□□□□□ -0.79
CCDC33-209ENST00000560565 KIF6Q6ZMV9 814 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 CNTROBQ8N137 903 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 RNF214Q8ND24 703 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 ABHD8Q96I13 439 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 TM6SF1Q9BZW5 370 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 SCAND2PQ9GZW5 306 aaPredicted RBP10.1□□□□□ -0.79
CCDC33-209ENST00000560565 TSPYL1Q9H0U9 437 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
CCDC33-209ENST00000560565 NRXN2Q9P2S2 1712 aa10.1□□□□□ -0.79
CCDC33-209ENST00000560565 PITPNM2Q9BZ72 1349 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 BRCA1P38398 1863 aaKnown RBP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 ERVV-1B6SEH8 477 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 H0YIN7 160 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 CTIFO43310 598 aaKnown RBP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 STX6O43752 255 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 CHMLP26374 656 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 ATP8B2P98198 1209 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 AIMP1Q12904 312 aaKnown RBP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 TRIM28Q13263 835 aaKnown RBP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 HLFQ16534 295 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 HSP90AB3PQ58FF7 597 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 CNBD1Q8NA66 436 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 BRIP1Q9BX63 1249 aa10.09□□□□□ -0.79
CCDC33-209ENST00000560565 DDX19AQ9NUU7 478 aaKnown RBP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 C9orf78Q9NZ63 289 aaPredicted RBP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 NIP7Q9Y221 180 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC33-209ENST00000560565 MAP3K15Q6ZN16 1313 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 GOLGA6L4A6NEF3 574 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 NEURL1BA8MQ27 555 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 GRM8O00222 908 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 TOMM70O94826 608 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
CCDC33-209ENST00000560565 PSMA5P28066 241 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 PDE6BP35913 854 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 KRT85P78386 507 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 ST5P78524 1137 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 MTX1Q13505 466 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 PPP4R3BQ5MIZ7 849 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 PRR5LQ6MZQ0 368 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 TPTE2Q6XPS3 522 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 ARHGAP27Q6ZUM4 889 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 C2CD5Q86YS7 1000 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 KIAA1524Q8TCG1 905 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 ANKRD7Q92527 254 aa10.08□□□□□ -0.8
CCDC33-209ENST00000560565 TTC41PQ6P2S7 1318 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 RAD50Q92878 1312 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 PDE4DIPQ5VU43 2346 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 RPAP1Q9BWH6 1393 aaPredicted RBP10.07□□□□□ -0.8
CCDC33-209ENST00000560565 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 CTAGE5O15320 804 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 CCP110O43303 1012 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 F13A1P00488 732 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 GTF2E1P29083 439 aaPredicted RBP10.07□□□□□ -0.8
CCDC33-209ENST00000560565 CDC25BP30305 580 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 PKP1Q13835 747 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 GCKRQ14397 625 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 MAP3K11Q16584 847 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 VPS53Q5VIR6 699 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 MPNDQ8N594 471 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 ZBTB3Q9H5J0 574 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 ARFGEF1Q9Y6D6 1849 aa10.07□□□□□ -0.8
CCDC33-209ENST00000560565 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms