RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 DCAF8Q5TAQ9 597 aa19.25■□□□□ 0.67
LYSMD2-204ENST00000560491 KCNQ5Q9NR82 932 aa19.25■□□□□ 0.67
LYSMD2-204ENST00000560491 ARAP2Q8WZ64 1704 aa19.25■□□□□ 0.67
LYSMD2-204ENST00000560491 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
LYSMD2-204ENST00000560491 CXCL9Q07325 125 aa19.24■□□□□ 0.67
LYSMD2-204ENST00000560491 DPY19L2Q6NUT2 758 aa19.24■□□□□ 0.67
LYSMD2-204ENST00000560491 C15orf52Q6ZUT6 534 aaKnown RBP19.24■□□□□ 0.67
LYSMD2-204ENST00000560491 RPAP2Q8IXW5 612 aaPredicted RBP19.24■□□□□ 0.67
LYSMD2-204ENST00000560491 CEP126Q9P2H0 1117 aa19.24■□□□□ 0.67
LYSMD2-204ENST00000560491 GJA3Q9Y6H8 435 aa19.24■□□□□ 0.67
LYSMD2-204ENST00000560491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.24■□□□□ 0.67
LYSMD2-204ENST00000560491 SURF6O75683 361 aaKnown RBP19.23■□□□□ 0.67
LYSMD2-204ENST00000560491 TFCP2Q12800 502 aa19.23■□□□□ 0.67
LYSMD2-204ENST00000560491 G3BP1Q13283 466 aaKnown RBP eCLIP19.23■□□□□ 0.67
LYSMD2-204ENST00000560491 PUM3Q15397 648 aaKnown RBP19.23■□□□□ 0.67
LYSMD2-204ENST00000560491 GPBP1L1Q9HC44 474 aaPredicted RBP19.23■□□□□ 0.67
LYSMD2-204ENST00000560491 NMRK2Q9NPI5 230 aa19.23■□□□□ 0.67
LYSMD2-204ENST00000560491 FGFR2P21802 821 aa19.22■□□□□ 0.67
LYSMD2-204ENST00000560491 GYG1P46976 350 aa19.22■□□□□ 0.67
LYSMD2-204ENST00000560491 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
LYSMD2-204ENST00000560491 OS9Q13438 667 aaPredicted RBP19.22■□□□□ 0.67
LYSMD2-204ENST00000560491 CIAPIN1Q6FI81 312 aa19.22■□□□□ 0.67
LYSMD2-204ENST00000560491 GPC2Q8N158 579 aa19.22■□□□□ 0.67
LYSMD2-204ENST00000560491 EXOC6BQ9Y2D4 811 aa19.22■□□□□ 0.67
LYSMD2-204ENST00000560491 PSMD14O00487 310 aa19.21■□□□□ 0.67
LYSMD2-204ENST00000560491 SASH1O94885 1247 aa19.21■□□□□ 0.67
LYSMD2-204ENST00000560491 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
LYSMD2-204ENST00000560491 COA1Q9GZY4 146 aa19.21■□□□□ 0.67
LYSMD2-204ENST00000560491 RRAGCQ9HB90 399 aa19.21■□□□□ 0.67
LYSMD2-204ENST00000560491 NOP58Q9Y2X3 529 aaKnown RBP19.21■□□□□ 0.67
LYSMD2-204ENST00000560491 MYH13Q9UKX3 1938 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 HMMRO75330 724 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 SLC5A1P13866 664 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 ZNF804AQ7Z570 1209 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 PODNQ7Z5L7 613 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 EXOC6Q8TAG9 804 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 LPIN2Q92539 896 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 FAM84BQ96KN1 310 aaPredicted RBP19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 CD209Q9NNX6 404 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 PCDHB15Q9Y5E8 787 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 SCN4AP35499 1836 aa19.2■□□□□ 0.66
LYSMD2-204ENST00000560491 ZNF609O15014 1411 aa19.19■□□□□ 0.66
LYSMD2-204ENST00000560491 IFIT1P09914 478 aaKnown RBP19.19■□□□□ 0.66
LYSMD2-204ENST00000560491 TNIP1Q15025 636 aa19.19■□□□□ 0.66
LYSMD2-204ENST00000560491 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
LYSMD2-204ENST00000560491 POTECB2RU33 542 aa19.18■□□□□ 0.66
LYSMD2-204ENST00000560491 ADORA1P30542 326 aa19.18■□□□□ 0.66
LYSMD2-204ENST00000560491 HIBADHP31937 336 aaKnown RBP19.18■□□□□ 0.66
LYSMD2-204ENST00000560491 L3MBTL3Q96JM7 780 aaPredicted RBP19.18■□□□□ 0.66
LYSMD2-204ENST00000560491 ZBTB12Q9Y330 459 aaPredicted RBP19.18■□□□□ 0.66
LYSMD2-204ENST00000560491 A0A1B0GUL7 405 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 IL1R1P14778 569 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 GMPSP49915 693 aaPredicted RBP19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 BCAMP50895 628 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 SCNN1DP51172 638 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 TIMM10P62072 90 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 FBXO33Q7Z6M2 555 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 MXD3Q9BW11 206 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 IQSEC3Q9UPP2 1182 aaPredicted RBP19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 JAG2Q9Y219 1238 aa19.17■□□□□ 0.66
LYSMD2-204ENST00000560491 USP17L3A6NCW0 530 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 USP17L4A6NCW7 530 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 APBB1O00213 710 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 KIF3CO14782 793 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 GTF2IP78347 998 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 CAVIN4Q5BKX8 364 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 USP17L1Q7RTZ2 530 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 VPS37DQ86XT2 251 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 AKAP2Q9Y2D5 859 aa19.16■□□□□ 0.66
LYSMD2-204ENST00000560491 VIL1P09327 827 aaKnown RBP19.15■□□□□ 0.66
LYSMD2-204ENST00000560491 DACT2Q5SW24 774 aa19.15■□□□□ 0.66
LYSMD2-204ENST00000560491 TDRD7Q8NHU6 1098 aaKnown RBP19.15■□□□□ 0.66
LYSMD2-204ENST00000560491 NEUROD6Q96NK8 337 aa19.15■□□□□ 0.66
LYSMD2-204ENST00000560491 SHTN1A0MZ66 631 aa19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 VEGFAP15692 232 aaPredicted RBP19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 TNNI3KQ59H18 835 aa19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 TTLL5Q6EMB2 1281 aa19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 RSBN1LQ6PCB5 846 aaPredicted RBP19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 XAGE2Q96GT9 111 aa19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 HACL1Q9UJ83 578 aa19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 FPGT-TNNI3KV9GXZ4 949 aa19.14■□□□□ 0.65
LYSMD2-204ENST00000560491 IQCA1LA6NCM1 817 aa19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 LMOD1P29536 600 aaPredicted RBP19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 EPS15P42566 896 aa19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 PHKA1P46020 1223 aa19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 STRIP1Q5VSL9 837 aa19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 ERC1Q8IUD2 1116 aa19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 GPRC5DQ9NZD1 345 aa19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 COL1A1P02452 1464 aaPredicted RBP19.13■□□□□ 0.65
LYSMD2-204ENST00000560491 RHPN1Q8TCX5 695 aa19.12■□□□□ 0.65
LYSMD2-204ENST00000560491 TAF1DQ9H5J8 278 aaPredicted RBP19.12■□□□□ 0.65
LYSMD2-204ENST00000560491 IL1RAPL2Q9NP60 686 aa19.12■□□□□ 0.65
LYSMD2-204ENST00000560491 GPR108Q9NPR9 543 aa19.12■□□□□ 0.65
LYSMD2-204ENST00000560491 FRAT2O75474 233 aaPredicted RBP19.11■□□□□ 0.65
LYSMD2-204ENST00000560491 RPS12P25398 132 aaKnown RBP19.11■□□□□ 0.65
LYSMD2-204ENST00000560491 EPHX2P34913 555 aa19.11■□□□□ 0.65
LYSMD2-204ENST00000560491 CHAF1AQ13111 956 aaPredicted RBP19.11■□□□□ 0.65
LYSMD2-204ENST00000560491 CCDC102BQ68D86 513 aa19.11■□□□□ 0.65
LYSMD2-204ENST00000560491 MICALL2Q8IY33 904 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms