RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ZGPATQ8N5A5 531 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 M0R2C6 588 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 KLRK1P26718 216 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 GYG1P46976 350 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 SLC10A5Q5PT55 438 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 MINPP1Q9UNW1 487 aa13.08□□□□□ -0.32
SNRPA1-211ENST00000560433 MYO5AQ9Y4I1 1855 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 LAMB2P55268 1798 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 IDH1O75874 414 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 SLC5A1P13866 664 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 ANAPC15P60006 121 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 SLC27A2O14975 620 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 RNF113AO15541 343 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 TM4SF1P30408 202 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 PUS7LQ9H0K6 701 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
SNRPA1-211ENST00000560433 AKAP11Q9UKA4 1901 aa13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 CARMIL3Q8ND23 1372 aa13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 LRP5O75197 1615 aa13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 SERPINB2P05120 415 aa13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 SSFA2P28290 1259 aa13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 BSDC1Q9NW68 430 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 MAST3O60307 1309 aa13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 TNRC6CQ9HCJ0 1690 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-211ENST00000560433 DDR1Q08345 913 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 ADRA2BP18089 450 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 SLC9C2Q5TAH2 1124 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
SNRPA1-211ENST00000560433 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 SPATA5Q8NB90 893 aa13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 JAG2Q9Y219 1238 aa13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 COL24A1Q17RW2 1714 aa13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 PLSCR1O15162 318 aa13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 AK2P54819 239 aa13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 PKP1Q13835 747 aa13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 TTLL5Q6EMB2 1281 aa13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 GPR101Q96P66 508 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-211ENST00000560433 CYP21A2P08686 494 aa13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 DDIT3P35638 169 aa13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 TXNRD3Q86VQ6 643 aa13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 CHMP5Q9NZZ3 219 aa13.03□□□□□ -0.32
SNRPA1-211ENST00000560433 VPS37DQ86XT2 251 aa13.02□□□□□ -0.32
SNRPA1-211ENST00000560433 AKT1S1Q96B36 256 aa13.02□□□□□ -0.32
SNRPA1-211ENST00000560433 POLRMTO00411 1230 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 RGL2O15211 777 aa13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 LARGE1O95461 756 aa13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 HAND2P61296 217 aa13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 FOXD4L5Q5VV16 416 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 RUFY3Q7L099 469 aa13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 TTC14Q96N46 770 aa13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 ABCF2Q9UG63 623 aa13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 ZNF532Q9HCE3 1301 aa13.02□□□□□ -0.33
SNRPA1-211ENST00000560433 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 MAGEB6Q8N7X4 407 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 PDRG1Q9NUG6 133 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 ANKIB1Q9P2G1 1089 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 FOXP2O15409 715 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 ADD2P35612 726 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 ILDR2Q71H61 639 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 ZNF512BQ96KM6 892 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 RFX7Q2KHR2 1363 aa13.01□□□□□ -0.33
SNRPA1-211ENST00000560433 GPAA1O43292 621 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 PDE6AP16499 860 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 ST5P78524 1137 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 RNF20Q5VTR2 975 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 STOX1Q6ZVD7 989 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 APPBP2Q92624 585 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 KCNB2Q92953 911 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 IL17RAQ96F46 866 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 CHST3Q7LGC8 479 aa13□□□□□ -0.33
SNRPA1-211ENST00000560433 DDX24Q9GZR7 859 aaKnown RBP eCLIP13□□□□□ -0.33
SNRPA1-211ENST00000560433 SRCAPQ6ZRS2 3230 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms