RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 SLC4A10Q6U841 1118 aa11.46□□□□□ -0.57
IDH3A-217ENST00000559889 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.57
IDH3A-217ENST00000559889 TRMT2AQ8IZ69 625 aaKnown RBP11.46□□□□□ -0.57
IDH3A-217ENST00000559889 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.57
IDH3A-217ENST00000559889 LEMD3Q9Y2U8 911 aa11.46□□□□□ -0.57
IDH3A-217ENST00000559889 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.57
IDH3A-217ENST00000559889 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.58
IDH3A-217ENST00000559889 CHRNDQ07001 517 aa11.46□□□□□ -0.58
IDH3A-217ENST00000559889 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.58
IDH3A-217ENST00000559889 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.58
IDH3A-217ENST00000559889 AGBL3Q8NEM8 1001 aa11.46□□□□□ -0.58
IDH3A-217ENST00000559889 SSH1Q8WYL5 1049 aa11.46□□□□□ -0.58
IDH3A-217ENST00000559889 KAZALD1Q96I82 304 aa11.46□□□□□ -0.58
IDH3A-217ENST00000559889 ZNF804BA4D1E1 1349 aa11.46□□□□□ -0.58
IDH3A-217ENST00000559889 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 SNAP23O00161 211 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 CELF2O95319 508 aaKnown RBP11.45□□□□□ -0.58
IDH3A-217ENST00000559889 IFIT5Q13325 482 aaKnown RBP11.45□□□□□ -0.58
IDH3A-217ENST00000559889 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 SAPCD2Q86UD0 394 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.45□□□□□ -0.58
IDH3A-217ENST00000559889 SRCIN1Q9C0H9 1055 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 ASTN2O75129 1339 aaPredicted RBP11.45□□□□□ -0.58
IDH3A-217ENST00000559889 WDR33Q9C0J8 1336 aaKnown RBP11.45□□□□□ -0.58
IDH3A-217ENST00000559889 IRS2Q9Y4H2 1338 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 BCAR3O75815 825 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
IDH3A-217ENST00000559889 KIF4BQ2VIQ3 1234 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 USP48Q86UV5 1035 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 COA1Q9GZY4 146 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 UTYO14607 1347 aa11.45□□□□□ -0.58
IDH3A-217ENST00000559889 DACT2Q5SW24 774 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 MXD3Q9BW11 206 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 WBP1LQ9NX94 342 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 C9orf78Q9NZ63 289 aaPredicted RBP11.44□□□□□ -0.58
IDH3A-217ENST00000559889 PSME4Q14997 1843 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 FOXN1O15353 648 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 TAF5LO75529 589 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 CYP4F22Q6NT55 531 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 KRT26Q7Z3Y9 468 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
IDH3A-217ENST00000559889 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
IDH3A-217ENST00000559889 ZNF646O15015 1829 aaPredicted RBP11.43□□□□□ -0.58
IDH3A-217ENST00000559889 USP17L8P0C7I0 530 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 HELBQ8NG08 1087 aaPredicted RBP11.43□□□□□ -0.58
IDH3A-217ENST00000559889 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 CHMP3Q9Y3E7 222 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 PTPRCP08575 1304 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 ADM5C9JUS6 153 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 STRIP1Q5VSL9 837 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 ZNF408Q9H9D4 720 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 GGA3Q9NZ52 723 aa11.43□□□□□ -0.58
IDH3A-217ENST00000559889 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
IDH3A-217ENST00000559889 CCDC57Q2TAC2 916 aa11.42□□□□□ -0.58
IDH3A-217ENST00000559889 C15orf52Q6ZUT6 534 aaKnown RBP11.42□□□□□ -0.58
IDH3A-217ENST00000559889 DCPSQ96C86 337 aaKnown RBP11.42□□□□□ -0.58
IDH3A-217ENST00000559889 HHIPL1Q96JK4 782 aa11.42□□□□□ -0.58
IDH3A-217ENST00000559889 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
IDH3A-217ENST00000559889 SCARF1Q14162 830 aa11.42□□□□□ -0.58
IDH3A-217ENST00000559889 ALDH1L2Q3SY69 923 aa11.42□□□□□ -0.58
IDH3A-217ENST00000559889 LDHAL6AQ6ZMR3 332 aa11.42□□□□□ -0.58
IDH3A-217ENST00000559889 RABL6Q3YEC7 729 aaPredicted RBP11.41□□□□□ -0.58
IDH3A-217ENST00000559889 ANGEL2Q5VTE6 544 aaKnown RBP11.41□□□□□ -0.58
IDH3A-217ENST00000559889 CD209Q9NNX6 404 aa11.41□□□□□ -0.58
IDH3A-217ENST00000559889 ECE1P42892 770 aa11.41□□□□□ -0.58
IDH3A-217ENST00000559889 KCNJ4P48050 445 aa11.41□□□□□ -0.58
IDH3A-217ENST00000559889 TTLL5Q6EMB2 1281 aa11.41□□□□□ -0.58
IDH3A-217ENST00000559889 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
IDH3A-217ENST00000559889 FRAT1Q92837 279 aaPredicted RBP11.41□□□□□ -0.58
IDH3A-217ENST00000559889 USP44Q9H0E7 712 aa11.41□□□□□ -0.58
IDH3A-217ENST00000559889 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
IDH3A-217ENST00000559889 A0A1B0GUL6 1792 aa11.4□□□□□ -0.58
IDH3A-217ENST00000559889 AOC2O75106 756 aa11.4□□□□□ -0.58
IDH3A-217ENST00000559889 GRM1Q13255 1194 aa11.4□□□□□ -0.58
IDH3A-217ENST00000559889 PAXIP1Q6ZW49 1069 aaPredicted RBP11.4□□□□□ -0.58
IDH3A-217ENST00000559889 PUS3Q9BZE2 481 aaKnown RBP11.4□□□□□ -0.58
IDH3A-217ENST00000559889 MYO3BQ8WXR4 1341 aa11.4□□□□□ -0.59
IDH3A-217ENST00000559889 GTF2IP78347 998 aa11.4□□□□□ -0.59
IDH3A-217ENST00000559889 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.59
IDH3A-217ENST00000559889 NBPF9Q3BBW0 867 aa11.4□□□□□ -0.59
IDH3A-217ENST00000559889 SULF1Q8IWU6 871 aa11.4□□□□□ -0.59
IDH3A-217ENST00000559889 POLR2AP24928 1970 aaKnown RBP11.39□□□□□ -0.59
IDH3A-217ENST00000559889 IL1R1P14778 569 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 CERS5Q8N5B7 392 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 CNNM1Q9NRU3 951 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
IDH3A-217ENST00000559889 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 PITPNM2Q9BZ72 1349 aa11.39□□□□□ -0.59
IDH3A-217ENST00000559889 WNT10BO00744 389 aa11.38□□□□□ -0.59
IDH3A-217ENST00000559889 CT47B1P0C2W7 299 aaPredicted RBP11.38□□□□□ -0.59
IDH3A-217ENST00000559889 MAP2K2P36507 400 aa11.38□□□□□ -0.59
IDH3A-217ENST00000559889 CTCFP49711 727 aaPredicted RBP11.38□□□□□ -0.59
IDH3A-217ENST00000559889 HUNKP57058 714 aa11.38□□□□□ -0.59
IDH3A-217ENST00000559889 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms