RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 SLC27A2O14975 620 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 STK3Q13188 491 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 EP400NLQ6ZTU2 488 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 ERC1Q8IUD2 1116 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 CEP120Q8N960 986 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 CNNM3Q8NE01 707 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 MAP4K1Q92918 833 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 GBP3Q9H0R5 595 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 KIAA1468Q9P260 1216 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 DNAJC5BQ9UF47 199 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 ANKRD65E5RJM6 399 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 TDO2P48775 406 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 CHMP4BP1P59074 171 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 TOB2Q14106 344 aaPredicted RBP7.67□□□□□ -1.18
ZEB1-217ENST00000559858 POLA2Q14181 598 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 HSP90AB4PQ58FF6 505 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 SRGAP1Q7Z6B7 1085 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 DDX11Q96FC9 970 aa7.67□□□□□ -1.18
ZEB1-217ENST00000559858 CLTCQ00610 1675 aaKnown RBP7.67□□□□□ -1.18
ZEB1-217ENST00000559858 HIP1O00291 1037 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 IKBKBO14920 756 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 JAK2O60674 1132 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 N4BP1O75113 896 aaKnown RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 ERLIN2O94905 339 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 TUBBP07437 444 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 ME1P48163 572 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 MNAT1P51948 309 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NLRP12P59046 1061 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 FLIIQ13045 1269 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 DPCR1Q3MIW9 517 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NUTM2DQ5VT03 806 aaPredicted RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NBPF6Q5VWK0 638 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NAA16Q6N069 864 aaPredicted RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 PPP1R42Q7Z4L9 355 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 FMR1NBQ8N0W7 255 aaPredicted RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 CEP112Q8N8E3 955 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 MSANTD4Q8NCY6 345 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 CCDC102AQ96A19 550 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 DHX58Q96C10 678 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NBPF4Q96M43 638 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 FMNL2Q96PY5 1086 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 USP44Q9H0E7 712 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NEXMIFQ5QGS0 1516 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 ARAP3Q8WWN8 1544 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NPM3O75607 178 aaKnown RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 UBASH3AP57075 661 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 TUBB2AQ13885 445 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 NCAPHQ15003 741 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 MRPS27Q92552 414 aaKnown RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 ERCC4Q92889 916 aaPredicted RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 KIFC2Q96AC6 838 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 TACO1Q9BSH4 297 aaKnown RBP7.66□□□□□ -1.18
ZEB1-217ENST00000559858 TUBB2BQ9BVA1 445 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 KCNG1Q9UIX4 513 aa7.66□□□□□ -1.18
ZEB1-217ENST00000559858 TOP1P11387 765 aaKnown RBP7.65□□□□□ -1.18
ZEB1-217ENST00000559858 HNRNPH1P31943 449 aaKnown RBP7.65□□□□□ -1.18
ZEB1-217ENST00000559858 TRDNQ13061 729 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 VSTM4Q8IW00 320 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 EVI5LQ96CN4 794 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 TCEANC2Q96MN5 208 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 BICC1Q9H694 974 aaKnown RBP7.65□□□□□ -1.18
ZEB1-217ENST00000559858 ANKZF1Q9H8Y5 726 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 ABCB6Q9NP58 842 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 TSPYL4Q9UJ04 414 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 CRB1P82279 1406 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 ATP7BP35670 1465 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 CUTAO60888 179 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.18
ZEB1-217ENST00000559858 CASP8Q14790 479 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 DHX37Q8IY37 1157 aaKnown RBP7.65□□□□□ -1.18
ZEB1-217ENST00000559858 CCDC12Q8WUD4 166 aaPredicted RBP7.65□□□□□ -1.18
ZEB1-217ENST00000559858 GPATCH3Q96I76 525 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 USP28Q96RU2 1077 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 FAM204AQ9H8W3 233 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 HMG20BQ9P0W2 317 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 CRYBG1Q9Y4K1 1723 aa7.65□□□□□ -1.18
ZEB1-217ENST00000559858 A0A1W2PQ27 194 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 A0A1W2PQ64 194 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 A0A1W2PQD8 194 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 MYO1BO43795 1136 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 STX10O60499 249 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 SERPINC1P01008 464 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 SLC3A2P08195 630 aaKnown RBP7.65□□□□□ -1.19
ZEB1-217ENST00000559858 SETQ01105 290 aaPredicted RBP7.65□□□□□ -1.19
ZEB1-217ENST00000559858 ADALQ6DHV7 355 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 SULT6B1Q6IMI4 303 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 TMEM139Q8IV31 216 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 AFAP1L1Q8TED9 768 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 BAG1Q99933 345 aaPredicted RBP7.65□□□□□ -1.19
ZEB1-217ENST00000559858 LLPHQ9BRT6 129 aaKnown RBP7.65□□□□□ -1.19
ZEB1-217ENST00000559858 ECHDC1Q9NTX5 307 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 MIS18AQ9NYP9 233 aa7.65□□□□□ -1.19
ZEB1-217ENST00000559858 PTPRMP28827 1452 aa7.64□□□□□ -1.19
ZEB1-217ENST00000559858 CFAP100Q494V2 611 aa7.64□□□□□ -1.19
ZEB1-217ENST00000559858 FTOQ9C0B1 505 aaKnown RBP eCLIP7.64□□□□□ -1.19
ZEB1-217ENST00000559858 ZSWIM4Q9H7M6 989 aa7.64□□□□□ -1.19
ZEB1-217ENST00000559858 A1CFQ9NQ94 594 aaKnown RBP7.64□□□□□ -1.19
ZEB1-217ENST00000559858 SNRKQ9NRH2 765 aa7.64□□□□□ -1.19
ZEB1-217ENST00000559858 CDC23Q9UJX2 597 aa7.64□□□□□ -1.19
ZEB1-217ENST00000559858 NPATQ14207 1427 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms