RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TLR7Q9NYK1 1049 aaKnown RBP21.45■■□□□ 1.02
SNX1-208ENST00000559844 ALDH1B1P30837 517 aa21.45■■□□□ 1.02
SNX1-208ENST00000559844 IGHMBP2P38935 993 aaKnown RBP21.45■■□□□ 1.02
SNX1-208ENST00000559844 RPS8P62241 208 aaKnown RBP21.45■■□□□ 1.02
SNX1-208ENST00000559844 CWC27Q6UX04 472 aaKnown RBP21.45■■□□□ 1.02
SNX1-208ENST00000559844 CNKSR1Q969H4 720 aa21.44■■□□□ 1.02
SNX1-208ENST00000559844 SYT17Q9BSW7 474 aa21.44■■□□□ 1.02
SNX1-208ENST00000559844 IL25Q9H293 177 aa21.44■■□□□ 1.02
SNX1-208ENST00000559844 GPR108Q9NPR9 543 aa21.44■■□□□ 1.02
SNX1-208ENST00000559844 WWC3Q9ULE0 1092 aa21.44■■□□□ 1.02
SNX1-208ENST00000559844 ATP5JP18859 108 aa21.43■■□□□ 1.02
SNX1-208ENST00000559844 IL15P40933 162 aaPredicted RBP21.43■■□□□ 1.02
SNX1-208ENST00000559844 MPHOSPH8Q99549 860 aa21.43■■□□□ 1.02
SNX1-208ENST00000559844 LSG1Q9H089 658 aaKnown RBP21.43■■□□□ 1.02
SNX1-208ENST00000559844 NEK4P51957 841 aa21.43■■□□□ 1.02
SNX1-208ENST00000559844 PIM2Q9P1W9 311 aa21.43■■□□□ 1.02
SNX1-208ENST00000559844 GOLGB1Q14789 3259 aaKnown RBP21.42■■□□□ 1.02
SNX1-208ENST00000559844 CIAO1O76071 339 aa21.42■■□□□ 1.02
SNX1-208ENST00000559844 PRPF40BQ6NWY9 871 aaKnown RBP21.42■■□□□ 1.02
SNX1-208ENST00000559844 LDHAL6AQ6ZMR3 332 aa21.42■■□□□ 1.02
SNX1-208ENST00000559844 PALD1Q9ULE6 856 aa21.42■■□□□ 1.02
SNX1-208ENST00000559844 TTLL6Q8N841 843 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 BOLA2Q9H3K6 86 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 CWC22Q9HCG8 908 aaKnown RBP21.41■■□□□ 1.02
SNX1-208ENST00000559844 DBNLQ9UJU6 430 aaKnown RBP21.41■■□□□ 1.02
SNX1-208ENST00000559844 FBXO3Q9UK99 471 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 PPEF1O14829 653 aaPredicted RBP21.41■■□□□ 1.02
SNX1-208ENST00000559844 BBOX1O75936 387 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 MCM4P33991 863 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 RAB3GAP1Q15042 981 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 PUS3Q9BZE2 481 aaKnown RBP21.41■■□□□ 1.02
SNX1-208ENST00000559844 CNNM1Q9NRU3 951 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
SNX1-208ENST00000559844 EYA2O00167 538 aa21.4■■□□□ 1.02
SNX1-208ENST00000559844 RFX7Q2KHR2 1363 aa21.4■■□□□ 1.02
SNX1-208ENST00000559844 LRRC24Q50LG9 513 aa21.4■■□□□ 1.02
SNX1-208ENST00000559844 FOXD4L1Q9NU39 408 aa21.4■■□□□ 1.02
SNX1-208ENST00000559844 BSDC1Q9NW68 430 aaPredicted RBP21.4■■□□□ 1.02
SNX1-208ENST00000559844 LRRC37AA6NMS7 1700 aa21.4■■□□□ 1.02
SNX1-208ENST00000559844 ATG9AQ7Z3C6 839 aa21.39■■□□□ 1.02
SNX1-208ENST00000559844 FSD1Q9BTV5 496 aa21.39■■□□□ 1.02
SNX1-208ENST00000559844 SLC51AQ86UW1 340 aa21.39■■□□□ 1.01
SNX1-208ENST00000559844 DALRD3Q5D0E6 543 aaKnown RBP21.38■■□□□ 1.01
SNX1-208ENST00000559844 SNRKQ9NRH2 765 aa21.38■■□□□ 1.01
SNX1-208ENST00000559844 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
SNX1-208ENST00000559844 GSE1Q14687 1217 aa21.37■■□□□ 1.01
SNX1-208ENST00000559844 TMC4Q7Z404 712 aa21.37■■□□□ 1.01
SNX1-208ENST00000559844 GBP4Q96PP9 640 aa21.37■■□□□ 1.01
SNX1-208ENST00000559844 ARFGEF1Q9Y6D6 1849 aa21.37■■□□□ 1.01
SNX1-208ENST00000559844 DDX11L8A8MPP1 907 aa21.37■■□□□ 1.01
SNX1-208ENST00000559844 DBNDD2Q9BQY9 259 aa21.37■■□□□ 1.01
SNX1-208ENST00000559844 ATP6V0A2Q9Y487 856 aa21.37■■□□□ 1.01
SNX1-208ENST00000559844 NUCB2P80303 420 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 OLFM4Q6UX06 510 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 MINPP1Q9UNW1 487 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 BCS1LQ9Y276 419 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 RIPOR2Q9Y4F9 1068 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 SNX14Q9Y5W7 946 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 NMIQ13287 307 aaPredicted RBP21.36■■□□□ 1.01
SNX1-208ENST00000559844 TICAM2Q86XR7 235 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 TNPO1Q92973 898 aaKnown RBP21.36■■□□□ 1.01
SNX1-208ENST00000559844 HAUS7Q99871 368 aa21.36■■□□□ 1.01
SNX1-208ENST00000559844 CCDC171Q6TFL3 1326 aa21.35■■□□□ 1.01
SNX1-208ENST00000559844 C21orf2O43822 256 aa21.35■■□□□ 1.01
SNX1-208ENST00000559844 CHRNDQ07001 517 aa21.35■■□□□ 1.01
SNX1-208ENST00000559844 SP8Q8IXZ3 490 aa21.35■■□□□ 1.01
SNX1-208ENST00000559844 TMX4Q9H1E5 349 aaPredicted RBP21.35■■□□□ 1.01
SNX1-208ENST00000559844 ZNF609O15014 1411 aa21.35■■□□□ 1.01
SNX1-208ENST00000559844 PTMSP20962 102 aa21.34■■□□□ 1.01
SNX1-208ENST00000559844 METTL24Q5JXM2 366 aa21.34■■□□□ 1.01
SNX1-208ENST00000559844 MROH5Q6ZUA9 1318 aa21.34■■□□□ 1.01
SNX1-208ENST00000559844 HELBQ8NG08 1087 aaPredicted RBP21.34■■□□□ 1.01
SNX1-208ENST00000559844 C7orf43Q8WVR3 580 aa21.34■■□□□ 1.01
SNX1-208ENST00000559844 KCNB2Q92953 911 aa21.34■■□□□ 1.01
SNX1-208ENST00000559844 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
SNX1-208ENST00000559844 CEP126Q9P2H0 1117 aa21.34■■□□□ 1.01
SNX1-208ENST00000559844 NEUROD6Q96NK8 337 aa21.33■■□□□ 1.01
SNX1-208ENST00000559844 AKAP2Q9Y2D5 859 aa21.33■■□□□ 1.01
SNX1-208ENST00000559844 LTBP1Q14766 1721 aa21.32■■□□□ 1
SNX1-208ENST00000559844 FAM227BQ96M60 508 aa21.32■■□□□ 1
SNX1-208ENST00000559844 ANKIB1Q9P2G1 1089 aa21.32■■□□□ 1
SNX1-208ENST00000559844 MED23Q9ULK4 1368 aa21.32■■□□□ 1
SNX1-208ENST00000559844 TAF5LO75529 589 aa21.32■■□□□ 1
SNX1-208ENST00000559844 PTH1RQ03431 593 aa21.32■■□□□ 1
SNX1-208ENST00000559844 CUL4AQ13619 759 aa21.32■■□□□ 1
SNX1-208ENST00000559844 INTS4Q96HW7 963 aaKnown RBP21.32■■□□□ 1
SNX1-208ENST00000559844 NSFL1CQ9UNZ2 370 aaKnown RBP21.32■■□□□ 1
SNX1-208ENST00000559844 GPSM2P81274 684 aa21.31■■□□□ 1
SNX1-208ENST00000559844 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.31■■□□□ 1
SNX1-208ENST00000559844 MAP4K1Q92918 833 aa21.31■■□□□ 1
SNX1-208ENST00000559844 UPF3BQ9BZI7 483 aaKnown RBP21.31■■□□□ 1
SNX1-208ENST00000559844 ANKRD2Q9GZV1 360 aa21.31■■□□□ 1
SNX1-208ENST00000559844 A0A0D9SFI3 127 aa21.3■■□□□ 1
SNX1-208ENST00000559844 CLEC17AQ6ZS10 378 aa21.3■■□□□ 1
SNX1-208ENST00000559844 VGLL2Q8N8G2 317 aa21.3■■□□□ 1
SNX1-208ENST00000559844 DNAJC2Q99543 621 aaKnown RBP21.3■■□□□ 1
SNX1-208ENST00000559844 TM6SF1Q9BZW5 370 aa21.3■■□□□ 1
SNX1-208ENST00000559844 XDHP47989 1333 aa21.3■■□□□ 1
SNX1-208ENST00000559844 A0A1B0GUL7 405 aa21.3■■□□□ 1
SNX1-208ENST00000559844 PDE8BO95263 885 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms