RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 NPR3P17342 541 aa6.28□□□□□ -1.4
CASC4-210ENST00000559550 TARSP26639 723 aaKnown RBP6.28□□□□□ -1.4
CASC4-210ENST00000559550 EIF1AXP47813 144 aaKnown RBP6.28□□□□□ -1.4
CASC4-210ENST00000559550 FKBP4Q02790 459 aaKnown RBP eCLIP6.28□□□□□ -1.4
CASC4-210ENST00000559550 TRIP4Q15650 581 aaPredicted RBP6.28□□□□□ -1.4
CASC4-210ENST00000559550 ECM1Q16610 540 aa6.28□□□□□ -1.4
CASC4-210ENST00000559550 CMTR1Q8N1G2 835 aaKnown RBP6.28□□□□□ -1.4
CASC4-210ENST00000559550 ABTB2Q8N961 1025 aa6.28□□□□□ -1.4
CASC4-210ENST00000559550 GPR152Q8TDT2 470 aa6.28□□□□□ -1.4
CASC4-210ENST00000559550 C7orf69Q9H7B7 122 aa6.28□□□□□ -1.4
CASC4-210ENST00000559550 MTMR7Q9Y216 660 aa6.28□□□□□ -1.4
CASC4-210ENST00000559550 KCNMB2Q9Y691 235 aa6.28□□□□□ -1.4
CASC4-210ENST00000559550 H3BRB1 525 aa6.27□□□□□ -1.41
CASC4-210ENST00000559550 DHX15O43143 795 aaKnown RBP6.27□□□□□ -1.41
CASC4-210ENST00000559550 ICMTO60725 284 aa6.27□□□□□ -1.41
CASC4-210ENST00000559550 EPB42P16452 691 aa6.27□□□□□ -1.41
CASC4-210ENST00000559550 NOM1Q5C9Z4 860 aaKnown RBP6.27□□□□□ -1.41
CASC4-210ENST00000559550 RNF43Q68DV7 783 aa6.27□□□□□ -1.41
CASC4-210ENST00000559550 ABI1Q8IZP0 508 aa6.27□□□□□ -1.41
CASC4-210ENST00000559550 TUT1Q9H6E5 874 aaKnown RBP6.27□□□□□ -1.41
CASC4-210ENST00000559550 SRA1Q9HD15 236 aaKnown RBP6.27□□□□□ -1.41
CASC4-210ENST00000559550 EGFL7Q9UHF1 273 aa6.27□□□□□ -1.41
CASC4-210ENST00000559550 XYLBO75191 536 aa6.26□□□□□ -1.41
CASC4-210ENST00000559550 SASH3O75995 380 aa6.26□□□□□ -1.41
CASC4-210ENST00000559550 SF3B2Q13435 895 aaKnown RBP6.26□□□□□ -1.41
CASC4-210ENST00000559550 HFE2Q6ZVN8 426 aa6.26□□□□□ -1.41
CASC4-210ENST00000559550 CBLL1Q75N03 491 aa6.26□□□□□ -1.41
CASC4-210ENST00000559550 KRT25Q7Z3Z0 450 aa6.26□□□□□ -1.41
CASC4-210ENST00000559550 TRIM42Q8IWZ5 723 aa6.26□□□□□ -1.41
CASC4-210ENST00000559550 DBNDD2Q9BQY9 259 aa6.26□□□□□ -1.41
CASC4-210ENST00000559550 GNEQ9Y223 722 aaKnown RBP6.26□□□□□ -1.41
CASC4-210ENST00000559550 HMX2A2RU54 273 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 TM4SF5O14894 197 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 FAM13AO94988 1023 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 EGFRP00533 1210 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 PDIA4P13667 645 aaKnown RBP6.25□□□□□ -1.41
CASC4-210ENST00000559550 NRLP54845 237 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 DNM1Q05193 864 aaKnown RBP6.25□□□□□ -1.41
CASC4-210ENST00000559550 MAP4K3Q8IVH8 894 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 CCER1Q8TC90 406 aaPredicted RBP6.25□□□□□ -1.41
CASC4-210ENST00000559550 PIK3R5Q8WYR1 880 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 EDEM1Q92611 657 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 FAM46AQ96IP4 442 aaKnown RBP6.25□□□□□ -1.41
CASC4-210ENST00000559550 C11orf16Q9NQ32 467 aa6.25□□□□□ -1.41
CASC4-210ENST00000559550 FZD6O60353 706 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 WISP1O95388 367 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 PDGFAP04085 211 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 ARHGAP4P98171 946 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 IL22RA1Q8N6P7 574 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 PLD4Q96BZ4 506 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 NUDT16Q96DE0 195 aaKnown RBP6.24□□□□□ -1.41
CASC4-210ENST00000559550 CCDC87Q9NVE4 849 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 IVNS1ABPQ9Y6Y0 642 aa6.24□□□□□ -1.41
CASC4-210ENST00000559550 A6NHS1 94 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 SOWAHDA6NJG2 315 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 UBAP1LF5GYI3 381 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 RARAP10276 462 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 EIF2AK2P19525 551 aaKnown RBP6.23□□□□□ -1.41
CASC4-210ENST00000559550 HOXA10P31260 410 aaPredicted RBP6.23□□□□□ -1.41
CASC4-210ENST00000559550 UVSSAQ2YD98 709 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 NFXL1Q6ZNB6 911 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 GLYCTKQ8IVS8 523 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 GALNT11Q8NCW6 608 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 SHKBP1Q8TBC3 707 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 GGNBP2Q9H3C7 697 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 POLIQ9UNA4 740 aa6.23□□□□□ -1.41
CASC4-210ENST00000559550 MZF1P28698 734 aaPredicted RBP6.22□□□□□ -1.41
CASC4-210ENST00000559550 KCNA1Q09470 495 aa6.22□□□□□ -1.41
CASC4-210ENST00000559550 AAMPQ13685 434 aa6.22□□□□□ -1.41
CASC4-210ENST00000559550 GDF6Q6KF10 455 aaPredicted RBP6.22□□□□□ -1.41
CASC4-210ENST00000559550 ALKBH2Q6NS38 261 aa6.22□□□□□ -1.41
CASC4-210ENST00000559550 DCAF11Q8TEB1 546 aa6.22□□□□□ -1.41
CASC4-210ENST00000559550 FAM13BQ9NYF5 915 aa6.22□□□□□ -1.41
CASC4-210ENST00000559550 TLR7Q9NYK1 1049 aaKnown RBP6.22□□□□□ -1.41
CASC4-210ENST00000559550 J3QW42 95 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 MMP20O60882 483 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 ITGB5P18084 799 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 NLRP13Q86W25 1043 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 AEBP1Q8IUX7 1158 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 UTP4Q969X6 686 aaKnown RBP6.21□□□□□ -1.42
CASC4-210ENST00000559550 MYRFLQ96LU7 910 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 FAM83CQ9BQN1 747 aa6.21□□□□□ -1.42
CASC4-210ENST00000559550 LOC102724428A0A0B4J2F2 783 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 SIK1P57059 783 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 COL19A1Q14993 1142 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 C8orf34Q49A92 452 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 FBLN7Q53RD9 439 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 CEP41Q9BYV8 373 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 KCNK4Q9NYG8 393 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 TMEM63CQ9P1W3 806 aa6.2□□□□□ -1.42
CASC4-210ENST00000559550 CYP2E1P05181 493 aaPredicted RBP6.19□□□□□ -1.42
CASC4-210ENST00000559550 HOXD8P13378 290 aaPredicted RBP6.19□□□□□ -1.42
CASC4-210ENST00000559550 SPOCD1Q6ZMY3 1216 aa6.19□□□□□ -1.42
CASC4-210ENST00000559550 CLEC10AQ8IUN9 316 aa6.19□□□□□ -1.42
CASC4-210ENST00000559550 ASIC4Q96FT7 647 aa6.19□□□□□ -1.42
CASC4-210ENST00000559550 ELP3Q9H9T3 547 aa6.19□□□□□ -1.42
CASC4-210ENST00000559550 FNDC3AQ9Y2H6 1198 aaKnown RBP6.19□□□□□ -1.42
CASC4-210ENST00000559550 MSMPQ1L6U9 139 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms