RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 LEMD3Q9Y2U8 911 aa19.03■□□□□ 0.64
LRRC28-213ENST00000559399 ASTN2O75129 1339 aaPredicted RBP19.02■□□□□ 0.64
LRRC28-213ENST00000559399 CA12O43570 354 aa19.02■□□□□ 0.64
LRRC28-213ENST00000559399 CSF1RP07333 972 aa19.02■□□□□ 0.64
LRRC28-213ENST00000559399 NOGQ13253 232 aa19.02■□□□□ 0.64
LRRC28-213ENST00000559399 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.64
LRRC28-213ENST00000559399 ANKRD2Q9GZV1 360 aa19.02■□□□□ 0.64
LRRC28-213ENST00000559399 COA1Q9GZY4 146 aa19.02■□□□□ 0.64
LRRC28-213ENST00000559399 MYOZ2Q9NPC6 264 aa19.02■□□□□ 0.64
LRRC28-213ENST00000559399 SCARF1Q14162 830 aa19.01■□□□□ 0.63
LRRC28-213ENST00000559399 ANGEL2Q5VTE6 544 aaKnown RBP19.01■□□□□ 0.63
LRRC28-213ENST00000559399 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
LRRC28-213ENST00000559399 F6X3S4 739 aa19■□□□□ 0.63
LRRC28-213ENST00000559399 DACT2Q5SW24 774 aa19■□□□□ 0.63
LRRC28-213ENST00000559399 BEND3Q5T5X7 828 aa19■□□□□ 0.63
LRRC28-213ENST00000559399 FBXW7Q969H0 707 aa19■□□□□ 0.63
LRRC28-213ENST00000559399 TRPM7Q96QT4 1865 aa19■□□□□ 0.63
LRRC28-213ENST00000559399 MYO3BQ8WXR4 1341 aa19■□□□□ 0.63
LRRC28-213ENST00000559399 ANKRD18BA2A2Z9 1011 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 KCNJ4P48050 445 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 STRIP1Q5VSL9 837 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 RGMBQ6NW40 437 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 OGFOD1Q8N543 542 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 CDCA5Q96FF9 252 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 TSKSQ9UJT2 592 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 PITPNM2Q9BZ72 1349 aa18.99■□□□□ 0.63
LRRC28-213ENST00000559399 KLRK1P26718 216 aa18.98■□□□□ 0.63
LRRC28-213ENST00000559399 CHRNDQ07001 517 aa18.98■□□□□ 0.63
LRRC28-213ENST00000559399 IFIT5Q13325 482 aaKnown RBP18.98■□□□□ 0.63
LRRC28-213ENST00000559399 TXNRD3Q86VQ6 643 aa18.98■□□□□ 0.63
LRRC28-213ENST00000559399 CCDC102AQ96A19 550 aa18.98■□□□□ 0.63
LRRC28-213ENST00000559399 SCN9AQ15858 1988 aa18.98■□□□□ 0.63
LRRC28-213ENST00000559399 MXD3Q9BW11 206 aa18.97■□□□□ 0.63
LRRC28-213ENST00000559399 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
LRRC28-213ENST00000559399 FAM155AB1AL88 458 aaPredicted RBP18.96■□□□□ 0.63
LRRC28-213ENST00000559399 GRM8O00222 908 aa18.96■□□□□ 0.63
LRRC28-213ENST00000559399 ZNF157P51786 506 aaPredicted RBP18.96■□□□□ 0.63
LRRC28-213ENST00000559399 FOXO4P98177 505 aa18.96■□□□□ 0.63
LRRC28-213ENST00000559399 ZIC5Q96T25 663 aa18.96■□□□□ 0.63
LRRC28-213ENST00000559399 MMP14P50281 582 aa18.94■□□□□ 0.62
LRRC28-213ENST00000559399 FKBP1BP68106 108 aa18.94■□□□□ 0.62
LRRC28-213ENST00000559399 NBPF9Q3BBW0 867 aa18.94■□□□□ 0.62
LRRC28-213ENST00000559399 TTLL5Q6EMB2 1281 aa18.94■□□□□ 0.62
LRRC28-213ENST00000559399 ABHD8Q96I13 439 aa18.94■□□□□ 0.62
LRRC28-213ENST00000559399 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
LRRC28-213ENST00000559399 ALDH1L1O75891 902 aa18.93■□□□□ 0.62
LRRC28-213ENST00000559399 SLC10A3P09131 477 aa18.93■□□□□ 0.62
LRRC28-213ENST00000559399 GTF2IP78347 998 aa18.93■□□□□ 0.62
LRRC28-213ENST00000559399 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
LRRC28-213ENST00000559399 LMBR1LQ6UX01 489 aa18.93■□□□□ 0.62
LRRC28-213ENST00000559399 CD209Q9NNX6 404 aa18.93■□□□□ 0.62
LRRC28-213ENST00000559399 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
LRRC28-213ENST00000559399 HDAC9Q9UKV0 1011 aa18.93■□□□□ 0.62
LRRC28-213ENST00000559399 WNT10BO00744 389 aa18.92■□□□□ 0.62
LRRC28-213ENST00000559399 TAF5LO75529 589 aa18.92■□□□□ 0.62
LRRC28-213ENST00000559399 KIF23Q02241 960 aaPredicted RBP18.92■□□□□ 0.62
LRRC28-213ENST00000559399 TAF7LQ5H9L4 462 aa18.92■□□□□ 0.62
LRRC28-213ENST00000559399 EPHA10Q5JZY3 1008 aa18.92■□□□□ 0.62
LRRC28-213ENST00000559399 SLC4A10Q6U841 1118 aa18.92■□□□□ 0.62
LRRC28-213ENST00000559399 C15orf52Q6ZUT6 534 aaKnown RBP18.92■□□□□ 0.62
LRRC28-213ENST00000559399 KIAA0825Q8IV33 1275 aa18.92■□□□□ 0.62
LRRC28-213ENST00000559399 HELBQ8NG08 1087 aaPredicted RBP18.92■□□□□ 0.62
LRRC28-213ENST00000559399 SRCIN1Q9C0H9 1055 aa18.92■□□□□ 0.62
LRRC28-213ENST00000559399 SNAP23O00161 211 aa18.91■□□□□ 0.62
LRRC28-213ENST00000559399 SASH1O94885 1247 aa18.91■□□□□ 0.62
LRRC28-213ENST00000559399 SCAF8Q9UPN6 1271 aaKnown RBP18.91■□□□□ 0.62
LRRC28-213ENST00000559399 IRS2Q9Y4H2 1338 aa18.91■□□□□ 0.62
LRRC28-213ENST00000559399 LDHAL6AQ6ZMR3 332 aa18.9■□□□□ 0.62
LRRC28-213ENST00000559399 ZNF804AQ7Z570 1209 aa18.9■□□□□ 0.62
LRRC28-213ENST00000559399 SAGE1Q9NXZ1 904 aa18.9■□□□□ 0.62
LRRC28-213ENST00000559399 MYH3P11055 1940 aa18.9■□□□□ 0.62
LRRC28-213ENST00000559399 PRAMEF18Q5VWM3 479 aa18.89■□□□□ 0.61
LRRC28-213ENST00000559399 RASAL3Q86YV0 1011 aa18.89■□□□□ 0.61
LRRC28-213ENST00000559399 ZNF594Q96JF6 807 aaPredicted RBP18.89■□□□□ 0.61
LRRC28-213ENST00000559399 CNNM1Q9NRU3 951 aa18.89■□□□□ 0.61
LRRC28-213ENST00000559399 PSME4Q14997 1843 aa18.88■□□□□ 0.61
LRRC28-213ENST00000559399 NF2P35240 595 aa18.88■□□□□ 0.61
LRRC28-213ENST00000559399 APOBEC3FQ8IUX4 373 aaKnown RBP18.88■□□□□ 0.61
LRRC28-213ENST00000559399 SPEF2Q9C093 1822 aa18.88■□□□□ 0.61
LRRC28-213ENST00000559399 IL1R1P14778 569 aa18.87■□□□□ 0.61
LRRC28-213ENST00000559399 TTLL12Q14166 644 aaPredicted RBP18.87■□□□□ 0.61
LRRC28-213ENST00000559399 REM2Q8IYK8 340 aaPredicted RBP18.87■□□□□ 0.61
LRRC28-213ENST00000559399 CERS5Q8N5B7 392 aa18.87■□□□□ 0.61
LRRC28-213ENST00000559399 SUCLG2Q96I99 432 aa18.87■□□□□ 0.61
LRRC28-213ENST00000559399 ZBED3Q96IU2 234 aaPredicted RBP18.87■□□□□ 0.61
LRRC28-213ENST00000559399 PAPPA2Q9BXP8 1791 aa18.87■□□□□ 0.61
LRRC28-213ENST00000559399 E9PSI1 815 aa18.86■□□□□ 0.61
LRRC28-213ENST00000559399 PLIN1O60240 522 aa18.86■□□□□ 0.61
LRRC28-213ENST00000559399 MOB2Q70IA6 237 aa18.86■□□□□ 0.61
LRRC28-213ENST00000559399 CSRNP1Q96S65 589 aa18.86■□□□□ 0.61
LRRC28-213ENST00000559399 RNF186Q9NXI6 227 aa18.86■□□□□ 0.61
LRRC28-213ENST00000559399 UTYO14607 1347 aa18.85■□□□□ 0.61
LRRC28-213ENST00000559399 PTPRCP08575 1304 aa18.85■□□□□ 0.61
LRRC28-213ENST00000559399 UBE2Q2LH0YL09 131 aa18.85■□□□□ 0.61
LRRC28-213ENST00000559399 NBPF7P0C2Y1 421 aaPredicted RBP18.85■□□□□ 0.61
LRRC28-213ENST00000559399 FKBP1AP62942 108 aaKnown RBP18.85■□□□□ 0.61
LRRC28-213ENST00000559399 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
LRRC28-213ENST00000559399 MRPL50Q8N5N7 158 aaKnown RBP18.85■□□□□ 0.61
LRRC28-213ENST00000559399 MCOLN1Q9GZU1 580 aa18.85■□□□□ 0.61
LRRC28-213ENST00000559399 CCDC85CA6NKD9 419 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms