RNA–Protein interactions for RNA: ENST00000559338.1

MEIS3-205, Transcript of Meis homeobox 3, humanhuman

TSL 5

Gene MEIS3, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-205ENST00000559338 CACNA1FO60840 1977 aa16.09■□□□□ 0.17
MEIS3-205ENST00000559338 LAMB2P55268 1798 aa16.08■□□□□ 0.17
MEIS3-205ENST00000559338 WTIPA6NIX2 430 aaPredicted RBP16.08■□□□□ 0.16
MEIS3-205ENST00000559338 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
MEIS3-205ENST00000559338 FXR1P51114 621 aaKnown RBP eCLIP16.08■□□□□ 0.16
MEIS3-205ENST00000559338 GMLQ99445 158 aa16.08■□□□□ 0.16
MEIS3-205ENST00000559338 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
MEIS3-205ENST00000559338 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
MEIS3-205ENST00000559338 SEC31BQ9NQW1 1179 aa16.07■□□□□ 0.16
MEIS3-205ENST00000559338 LRRC37AA6NMS7 1700 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 PTPRCP08575 1304 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 IPO8O15397 1037 aaKnown RBP16.06■□□□□ 0.16
MEIS3-205ENST00000559338 FKTNO75072 461 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 FLIIQ13045 1269 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 EYA3Q99504 573 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 SMC4Q9NTJ3 1288 aa16.06■□□□□ 0.16
MEIS3-205ENST00000559338 RANBP2P49792 3224 aaKnown RBP16.06■□□□□ 0.16
MEIS3-205ENST00000559338 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
MEIS3-205ENST00000559338 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
MEIS3-205ENST00000559338 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
MEIS3-205ENST00000559338 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
MEIS3-205ENST00000559338 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
MEIS3-205ENST00000559338 PRAMEF18Q5VWM3 479 aa16.05■□□□□ 0.16
MEIS3-205ENST00000559338 RSBN1LQ6PCB5 846 aaPredicted RBP16.05■□□□□ 0.16
MEIS3-205ENST00000559338 ZC3H12CQ9C0D7 883 aaKnown RBP16.05■□□□□ 0.16
MEIS3-205ENST00000559338 PODXL2Q9NZ53 605 aa16.05■□□□□ 0.16
MEIS3-205ENST00000559338 RARSP54136 660 aaKnown RBP16.04■□□□□ 0.16
MEIS3-205ENST00000559338 INTS3Q68E01 1043 aaKnown RBP16.04■□□□□ 0.16
MEIS3-205ENST00000559338 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
MEIS3-205ENST00000559338 JARID2Q92833 1246 aaPredicted RBP16.04■□□□□ 0.16
MEIS3-205ENST00000559338 ZNF609O15014 1411 aa16.03■□□□□ 0.16
MEIS3-205ENST00000559338 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
MEIS3-205ENST00000559338 USP17L8P0C7I0 530 aa16.03■□□□□ 0.16
MEIS3-205ENST00000559338 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
MEIS3-205ENST00000559338 ARHGAP45Q92619 1136 aa16.03■□□□□ 0.16
MEIS3-205ENST00000559338 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
MEIS3-205ENST00000559338 MYOZ2Q9NPC6 264 aa16.03■□□□□ 0.16
MEIS3-205ENST00000559338 UFL1O94874 794 aa16.02■□□□□ 0.16
MEIS3-205ENST00000559338 HSP90B1P14625 803 aaKnown RBP16.02■□□□□ 0.16
MEIS3-205ENST00000559338 MRPL50Q8N5N7 158 aaKnown RBP16.02■□□□□ 0.16
MEIS3-205ENST00000559338 API5Q9BZZ5 524 aaKnown RBP16.02■□□□□ 0.16
MEIS3-205ENST00000559338 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
MEIS3-205ENST00000559338 MS4A1P11836 297 aa16.01■□□□□ 0.15
MEIS3-205ENST00000559338 CCDC85AQ96PX6 553 aaPredicted RBP16.01■□□□□ 0.15
MEIS3-205ENST00000559338 MXD3Q9BW11 206 aa16.01■□□□□ 0.15
MEIS3-205ENST00000559338 SCN9AQ15858 1988 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 PI4KAP2A4QPH2 592 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 PTPN12Q05209 780 aaKnown RBP16■□□□□ 0.15
MEIS3-205ENST00000559338 SREBF2Q12772 1141 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 MKRN3Q13064 507 aaKnown RBP16■□□□□ 0.15
MEIS3-205ENST00000559338 TRIM28Q13263 835 aaKnown RBP16■□□□□ 0.15
MEIS3-205ENST00000559338 NBPF9Q3BBW0 867 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 LDLRAD1Q5T700 205 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 OTOP1Q7RTM1 612 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 PI4KAP1Q8N8J0 262 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
MEIS3-205ENST00000559338 DNAAF4Q8WXU2 420 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 METTL22Q9BUU2 404 aaPredicted RBP16■□□□□ 0.15
MEIS3-205ENST00000559338 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
MEIS3-205ENST00000559338 KIAA0100Q14667 2235 aaKnown RBP16■□□□□ 0.15
MEIS3-205ENST00000559338 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
MEIS3-205ENST00000559338 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
MEIS3-205ENST00000559338 EN2P19622 333 aaPredicted RBP15.98■□□□□ 0.15
MEIS3-205ENST00000559338 SPRYD7Q5W111 196 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 G2E3Q7L622 706 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 ARMC5Q96C12 935 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 GGA1Q9UJY5 639 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 COLQQ9Y215 455 aaPredicted RBP15.98■□□□□ 0.15
MEIS3-205ENST00000559338 TRIM17Q9Y577 477 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 AKAP11Q9UKA4 1901 aa15.98■□□□□ 0.15
MEIS3-205ENST00000559338 TRIOBPQ9H2D6 2365 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 USP17L3A6NCW0 530 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 USP17L4A6NCW7 530 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 ALDH1A1P00352 501 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 USP17L1Q7RTZ2 530 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 PODNQ7Z5L7 613 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
MEIS3-205ENST00000559338 LINS1Q8NG48 757 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 NOB1Q9ULX3 412 aaKnown RBP15.97■□□□□ 0.15
MEIS3-205ENST00000559338 CEP290O15078 2479 aa15.97■□□□□ 0.15
MEIS3-205ENST00000559338 PAPPA2Q9BXP8 1791 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 G3V3G9 751 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 WNT10BO00744 389 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 INHBEP58166 350 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 TTLL12Q14166 644 aaPredicted RBP15.96■□□□□ 0.15
MEIS3-205ENST00000559338 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 ZKSCAN2Q63HK3 967 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 IFNL1Q8IU54 200 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 MYD88Q99836 296 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.15
MEIS3-205ENST00000559338 HDAC5Q9UQL6 1122 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 PTPN22Q9Y2R2 807 aa15.96■□□□□ 0.15
MEIS3-205ENST00000559338 ALDH1L1O75891 902 aa15.95■□□□□ 0.14
MEIS3-205ENST00000559338 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
MEIS3-205ENST00000559338 FRAT1Q92837 279 aaPredicted RBP15.95■□□□□ 0.14
MEIS3-205ENST00000559338 FZD1Q9UP38 647 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms